RNA–Protein interactions for RNA: ENST00000602619.1

SGMS1-207, Transcript of sphingomyelin synthase 1, humanhuman

TSL 3

Gene SGMS1, Length 461 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-207ENST00000602619 TNFAIP8L2Q6P589 184 aaPredicted RBP1.96□□□□□ -2.1
SGMS1-207ENST00000602619 FAM131AQ6UXB0 335 aa1.96□□□□□ -2.1
SGMS1-207ENST00000602619 SPNS3Q6ZMD2 512 aa1.96□□□□□ -2.1
SGMS1-207ENST00000602619 FAM183BPQ6ZVS7 135 aa1.96□□□□□ -2.1
SGMS1-207ENST00000602619 FAM19A5Q7Z5A7 132 aaPredicted RBP1.96□□□□□ -2.1
SGMS1-207ENST00000602619 AKAP14Q86UN6 197 aa1.96□□□□□ -2.1
SGMS1-207ENST00000602619 LGI3Q8N145 548 aa1.96□□□□□ -2.1
SGMS1-207ENST00000602619 RIBC1Q8N443 379 aaPredicted RBP1.96□□□□□ -2.1
SGMS1-207ENST00000602619 CCNYL1Q8N7R7 359 aa1.96□□□□□ -2.1
SGMS1-207ENST00000602619 C11orf72Q8NBR9 251 aa1.96□□□□□ -2.1
SGMS1-207ENST00000602619 GPR26Q8NDV2 337 aa1.96□□□□□ -2.1
SGMS1-207ENST00000602619 OR5M1Q8NGP8 315 aa1.96□□□□□ -2.1
SGMS1-207ENST00000602619 C16orf78Q8WTQ4 265 aa1.96□□□□□ -2.1
SGMS1-207ENST00000602619 CYGBQ8WWM9 190 aa1.96□□□□□ -2.1
SGMS1-207ENST00000602619 TCEAL3Q969E4 200 aa1.96□□□□□ -2.1
SGMS1-207ENST00000602619 TLCD1Q96CP7 247 aa1.96□□□□□ -2.1
SGMS1-207ENST00000602619 DNAJC19Q96DA6 116 aa1.96□□□□□ -2.1
SGMS1-207ENST00000602619 OR10C1Q96KK4 312 aa1.96□□□□□ -2.1
SGMS1-207ENST00000602619 CEP170P1Q96L14 293 aa1.96□□□□□ -2.1
SGMS1-207ENST00000602619 CEP19Q96LK0 163 aa1.96□□□□□ -2.1
SGMS1-207ENST00000602619 PPP1R36Q96LQ0 422 aa1.96□□□□□ -2.1
SGMS1-207ENST00000602619 FAM19A4Q96LR4 140 aa1.96□□□□□ -2.1
SGMS1-207ENST00000602619 BIRC8Q96P09 236 aa1.96□□□□□ -2.1
SGMS1-207ENST00000602619 QKIQ96PU8 341 aaKnown RBP eCLIP1.96□□□□□ -2.11e-7■■■■□ 21.1
SGMS1-207ENST00000602619 SFXN3Q9BWM7 321 aa1.96□□□□□ -2.1
SGMS1-207ENST00000602619 CDCA4Q9BXL8 241 aa1.96□□□□□ -2.1
SGMS1-207ENST00000602619 SLC19A3Q9BZV2 496 aa1.96□□□□□ -2.1
SGMS1-207ENST00000602619 SLC22A4Q9H015 551 aa1.96□□□□□ -2.1
SGMS1-207ENST00000602619 LINC00597Q9H2U6 94 aa1.96□□□□□ -2.1
SGMS1-207ENST00000602619 OR51B6Q9H340 312 aa1.96□□□□□ -2.1
SGMS1-207ENST00000602619 MAP1LC3AQ9H492 121 aa1.96□□□□□ -2.1
SGMS1-207ENST00000602619 MRPL40Q9NQ50 206 aaKnown RBP1.96□□□□□ -2.1
SGMS1-207ENST00000602619 HEBP1Q9NRV9 189 aa1.96□□□□□ -2.1
SGMS1-207ENST00000602619 NYAP2Q9P242 653 aa1.96□□□□□ -2.1
SGMS1-207ENST00000602619 OPN4Q9UHM6 478 aa1.96□□□□□ -2.1
SGMS1-207ENST00000602619 TP53TG1Q9Y2A0 90 aa1.96□□□□□ -2.1
SGMS1-207ENST00000602619 HEBP2Q9Y5Z4 205 aa1.96□□□□□ -2.1
SGMS1-207ENST00000602619 PCDH11XQ9BZA7 1347 aa1.95□□□□□ -2.1
SGMS1-207ENST00000602619 ADGRL3Q9HAR2 1447 aa1.95□□□□□ -2.1
SGMS1-207ENST00000602619 PDS5BQ9NTI5 1447 aa1.95□□□□□ -2.1
SGMS1-207ENST00000602619 TRAV8-2A0A0B4J237 113 aa1.95□□□□□ -2.1
SGMS1-207ENST00000602619 A0A0J9YXV3 536 aa1.95□□□□□ -2.1
SGMS1-207ENST00000602619 A0A0J9YXY3 114 aa1.95□□□□□ -2.1
SGMS1-207ENST00000602619 A0A1B0GUA9 196 aa1.95□□□□□ -2.1
SGMS1-207ENST00000602619 METTL15A6NJ78 407 aa1.95□□□□□ -2.1
SGMS1-207ENST00000602619 PSPHP1O15172 72 aa1.95□□□□□ -2.1
SGMS1-207ENST00000602619 NDUFS5O43920 106 aa1.95□□□□□ -2.1
SGMS1-207ENST00000602619 KLF8O95600 359 aaPredicted RBP1.95□□□□□ -2.1
SGMS1-207ENST00000602619 MOSP00540 346 aa1.95□□□□□ -2.1
SGMS1-207ENST00000602619 SERPINA1P01009 418 aa1.95□□□□□ -2.1
SGMS1-207ENST00000602619 IGHV3-23P01764 117 aa1.95□□□□□ -2.1
SGMS1-207ENST00000602619 TCRBP04435 133 aa1.95□□□□□ -2.1
SGMS1-207ENST00000602619 HLA-DPB1P04440 258 aa1.95□□□□□ -2.1
SGMS1-207ENST00000602619 HIST1H1EP10412 219 aaKnown RBP1.95□□□□□ -2.1
SGMS1-207ENST00000602619 TDGF1P13385 188 aa1.95□□□□□ -2.1
SGMS1-207ENST00000602619 FUT3P21217 361 aa1.95□□□□□ -2.1
SGMS1-207ENST00000602619 CFL1P23528 166 aaKnown RBP1.95□□□□□ -2.1
SGMS1-207ENST00000602619 DTYMKP23919 212 aa1.95□□□□□ -2.1
SGMS1-207ENST00000602619 RPS12P25398 132 aaKnown RBP1.95□□□□□ -2.1
SGMS1-207ENST00000602619 TSPOP30536 169 aa1.95□□□□□ -2.1
SGMS1-207ENST00000602619 DRD3P35462 400 aa1.95□□□□□ -2.1
SGMS1-207ENST00000602619 KIR3DL2P43630 455 aa1.95□□□□□ -2.1
SGMS1-207ENST00000602619 TDGF1P3P51864 188 aa1.95□□□□□ -2.1
SGMS1-207ENST00000602619 ZNF138P52744 262 aa1.95□□□□□ -2.1
SGMS1-207ENST00000602619 CDKN2DP55273 166 aa1.95□□□□□ -2.1
SGMS1-207ENST00000602619 CCL23P55773 120 aa1.95□□□□□ -2.1
SGMS1-207ENST00000602619 LSM6P62312 80 aaKnown RBP1.95□□□□□ -2.1
SGMS1-207ENST00000602619 POLR2GP62487 172 aaKnown RBP eCLIP1.95□□□□□ -2.1
SGMS1-207ENST00000602619 HBG1P69891 147 aa1.95□□□□□ -2.1
SGMS1-207ENST00000602619 HBG2P69892 147 aa1.95□□□□□ -2.1
SGMS1-207ENST00000602619 PRDX1Q06830 199 aaKnown RBP1.95□□□□□ -2.1
SGMS1-207ENST00000602619 C16orf72Q14CZ0 275 aa1.95□□□□□ -2.1
SGMS1-207ENST00000602619 PMVKQ15126 192 aa1.95□□□□□ -2.1
SGMS1-207ENST00000602619 ZNF79Q15937 498 aa1.95□□□□□ -2.1
SGMS1-207ENST00000602619 PRSS8Q16651 343 aa1.95□□□□□ -2.1
SGMS1-207ENST00000602619 GUCA2BQ16661 112 aa1.95□□□□□ -2.1
SGMS1-207ENST00000602619 HIST3H3Q16695 136 aa1.95□□□□□ -2.1
SGMS1-207ENST00000602619 CEACAM16Q2WEN9 425 aa1.95□□□□□ -2.1
SGMS1-207ENST00000602619 ATP6AP1LQ52LC2 224 aa1.95□□□□□ -2.1
SGMS1-207ENST00000602619 CLEC12AQ5QGZ9 265 aa1.95□□□□□ -2.1
SGMS1-207ENST00000602619 KCTD16Q68DU8 428 aa1.95□□□□□ -2.1
SGMS1-207ENST00000602619 ARL9Q6T311 187 aa1.95□□□□□ -2.1
SGMS1-207ENST00000602619 CLEC19AQ6UXS0 136 aa1.95□□□□□ -2.1
SGMS1-207ENST00000602619 CASP12Q6UXS9 341 aa1.95□□□□□ -2.1
SGMS1-207ENST00000602619 FAM231DQ6ZW35 169 aa1.95□□□□□ -2.1
SGMS1-207ENST00000602619 OR4P4Q8NGL7 312 aa1.95□□□□□ -2.1
SGMS1-207ENST00000602619 LINC01006Q8NI28 216 aa1.95□□□□□ -2.1
SGMS1-207ENST00000602619 ZNF420Q8TAQ5 688 aaPredicted RBP1.95□□□□□ -2.1
SGMS1-207ENST00000602619 ACTRT1Q8TDG2 376 aa1.95□□□□□ -2.1
SGMS1-207ENST00000602619 RXFP4Q8TDU9 374 aa1.95□□□□□ -2.1
SGMS1-207ENST00000602619 DTD1Q8TEA8 209 aa1.95□□□□□ -2.1
SGMS1-207ENST00000602619 CASTOR1Q8WTX7 329 aa1.95□□□□□ -2.1
SGMS1-207ENST00000602619 AP3S1Q92572 193 aa1.95□□□□□ -2.1
SGMS1-207ENST00000602619 MARC2Q969Z3 335 aa1.95□□□□□ -2.1
SGMS1-207ENST00000602619 TMEM159Q96B96 161 aa1.95□□□□□ -2.1
SGMS1-207ENST00000602619 DGCR14Q96DF8 476 aaKnown RBP1.95□□□□□ -2.1
SGMS1-207ENST00000602619 IMP4Q96G21 291 aaKnown RBP1.95□□□□□ -2.1
SGMS1-207ENST00000602619 MRPL48Q96GC5 212 aaKnown RBP1.95□□□□□ -2.1
SGMS1-207ENST00000602619 RNF185Q96GF1 192 aa1.95□□□□□ -2.1
SGMS1-207ENST00000602619 SMARCD1Q96GM5 515 aa1.95□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 77.7 ms