RNA–Protein interactions for RNA: ENST00000600733.5

SHKBP1-225, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5 BASIC

Gene SHKBP1, Length 2,284 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-225ENST00000600733 FBXL14Q8N1E6 418 aa17.55■□□□□ 0.4
SHKBP1-225ENST00000600733 OR10Z1Q8NGY1 313 aa17.55■□□□□ 0.4
SHKBP1-225ENST00000600733 ERGIC1Q969X5 290 aa17.55■□□□□ 0.4
SHKBP1-225ENST00000600733 COL6A3P12111 3177 aa17.55■□□□□ 0.4
SHKBP1-225ENST00000600733 OR6C6A6NF89 314 aa17.55■□□□□ 0.4
SHKBP1-225ENST00000600733 ZNF716A6NP11 495 aa17.55■□□□□ 0.4
SHKBP1-225ENST00000600733 PATE3B3GLJ2 98 aa17.55■□□□□ 0.4
SHKBP1-225ENST00000600733 RNASEK-C17orf49H0YIS7 233 aa17.55■□□□□ 0.4
SHKBP1-225ENST00000600733 CXCL13O43927 109 aa17.55■□□□□ 0.4
SHKBP1-225ENST00000600733 RFPL3SP0C7P2 107 aa17.55■□□□□ 0.4
SHKBP1-225ENST00000600733 PSG4Q00888 419 aa17.55■□□□□ 0.4
SHKBP1-225ENST00000600733 PHLDA2Q53GA4 152 aa17.55■□□□□ 0.4
SHKBP1-225ENST00000600733 DHRS11Q6UWP2 260 aa17.55■□□□□ 0.4
SHKBP1-225ENST00000600733 RTN4IP1Q8WWV3 396 aaPredicted RBP17.55■□□□□ 0.4
SHKBP1-225ENST00000600733 PARP12Q9H0J9 701 aaKnown RBP17.55■□□□□ 0.4
SHKBP1-225ENST00000600733 MLXQ9UH92 298 aa17.55■□□□□ 0.4
SHKBP1-225ENST00000600733 TNRC6BQ9UPQ9 1833 aaKnown RBP17.54■□□□□ 0.4
SHKBP1-225ENST00000600733 C9JQL5 133 aa17.54■□□□□ 0.4
SHKBP1-225ENST00000600733 MBPP02686 304 aaPredicted RBP17.54■□□□□ 0.4
SHKBP1-225ENST00000600733 SFTA3P0C7M3 94 aa17.54■□□□□ 0.4
SHKBP1-225ENST00000600733 DTYMKP23919 212 aa17.54■□□□□ 0.4
SHKBP1-225ENST00000600733 RGS19P49795 217 aa17.54■□□□□ 0.4
SHKBP1-225ENST00000600733 ABCA11PQ4W5N1 156 aa17.54■□□□□ 0.4
SHKBP1-225ENST00000600733 SLC22A25Q6T423 547 aa17.54■□□□□ 0.4
SHKBP1-225ENST00000600733 BSCL2Q96G97 398 aaPredicted RBP17.54■□□□□ 0.4
SHKBP1-225ENST00000600733 NAA60Q9H7X0 242 aa17.54■□□□□ 0.4
SHKBP1-225ENST00000600733 TERTO14746 1132 aaKnown RBP17.54■□□□□ 0.4
SHKBP1-225ENST00000600733 RPS18P62269 152 aaKnown RBP17.54■□□□□ 0.4
SHKBP1-225ENST00000600733 ZNF92Q03936 586 aa17.54■□□□□ 0.4
SHKBP1-225ENST00000600733 TMEM187Q14656 261 aa17.54■□□□□ 0.4
SHKBP1-225ENST00000600733 BTNL8Q6UX41 500 aa17.54■□□□□ 0.4
SHKBP1-225ENST00000600733 Q6ZRG5 221 aa17.54■□□□□ 0.4
SHKBP1-225ENST00000600733 LHFPL2Q6ZUX7 228 aa17.54■□□□□ 0.4
SHKBP1-225ENST00000600733 AAED1Q7RTV5 226 aa17.54■□□□□ 0.4
SHKBP1-225ENST00000600733 LYZL2Q7Z4W2 148 aa17.54■□□□□ 0.4
SHKBP1-225ENST00000600733 BATF2Q8N1L9 274 aa17.54■□□□□ 0.4
SHKBP1-225ENST00000600733 KCNIP3Q9Y2W7 256 aa17.54■□□□□ 0.4
SHKBP1-225ENST00000600733 JTBO76095 146 aa17.53■□□□□ 0.4
SHKBP1-225ENST00000600733 DIRAS3O95661 229 aa17.53■□□□□ 0.4
SHKBP1-225ENST00000600733 CD80P33681 288 aa17.53■□□□□ 0.4
SHKBP1-225ENST00000600733 FOLR3P41439 243 aa17.53■□□□□ 0.4
SHKBP1-225ENST00000600733 CEACAM16Q2WEN9 425 aa17.53■□□□□ 0.4
SHKBP1-225ENST00000600733 OR5L1Q8NGL2 311 aa17.53■□□□□ 0.4
SHKBP1-225ENST00000600733 MAFAQ8NHW3 353 aaPredicted RBP17.53■□□□□ 0.4
SHKBP1-225ENST00000600733 CPT1CQ8TCG5 803 aa17.53■□□□□ 0.4
SHKBP1-225ENST00000600733 ST3GAL6Q9Y274 331 aa17.53■□□□□ 0.4
SHKBP1-225ENST00000600733 NTN3O00634 580 aaPredicted RBP17.52■□□□□ 0.4
SHKBP1-225ENST00000600733 GAPDHP04406 335 aaKnown RBP17.52■□□□□ 0.4
SHKBP1-225ENST00000600733 OR8U9P0C7N5 309 aa17.52■□□□□ 0.4
SHKBP1-225ENST00000600733 SRD5A2P31213 254 aa17.52■□□□□ 0.4
SHKBP1-225ENST00000600733 FAM3AP98173 230 aa17.52■□□□□ 0.4
SHKBP1-225ENST00000600733 TMEM42Q69YG0 159 aa17.52■□□□□ 0.4
SHKBP1-225ENST00000600733 ASCL4Q6XD76 172 aa17.52■□□□□ 0.4
SHKBP1-225ENST00000600733 Q6ZPA2 131 aa17.52■□□□□ 0.4
SHKBP1-225ENST00000600733 OSR2Q8N2R0 312 aa17.52■□□□□ 0.4
SHKBP1-225ENST00000600733 OR8U1Q8NH10 309 aa17.52■□□□□ 0.4
SHKBP1-225ENST00000600733 FOXB1Q99853 325 aa17.52■□□□□ 0.4
SHKBP1-225ENST00000600733 WNT5BQ9H1J7 359 aa17.52■□□□□ 0.4
SHKBP1-225ENST00000600733 SLC2A9Q9NRM0 540 aa17.52■□□□□ 0.4
SHKBP1-225ENST00000600733 XRCC2O43543 280 aa17.52■□□□□ 0.4
SHKBP1-225ENST00000600733 P04436 131 aa17.52■□□□□ 0.4
SHKBP1-225ENST00000600733 OR11L1Q8NGX0 322 aa17.52■□□□□ 0.4
SHKBP1-225ENST00000600733 OR2H1Q9GZK4 316 aa17.52■□□□□ 0.4
SHKBP1-225ENST00000600733 hCG_38984A0A1B0GV85 526 aa17.51■□□□□ 0.39
SHKBP1-225ENST00000600733 DNPH1O43598 174 aa17.51■□□□□ 0.39
SHKBP1-225ENST00000600733 CD5P06127 495 aa17.51■□□□□ 0.39
SHKBP1-225ENST00000600733 ZFP36L1Q07352 338 aaKnown RBP17.51■□□□□ 0.39
SHKBP1-225ENST00000600733 PDZK1IP1Q13113 114 aa17.51■□□□□ 0.39
SHKBP1-225ENST00000600733 KRTAP27-1Q3LI81 207 aa17.51■□□□□ 0.39
SHKBP1-225ENST00000600733 WIPI1Q5MNZ9 446 aaPredicted RBP17.51■□□□□ 0.39
SHKBP1-225ENST00000600733 CDCP2Q5VXM1 449 aa17.51■□□□□ 0.39
SHKBP1-225ENST00000600733 RAB11FIP2Q7L804 512 aa17.51■□□□□ 0.39
SHKBP1-225ENST00000600733 LINC00518Q8N0U6 118 aa17.51■□□□□ 0.39
SHKBP1-225ENST00000600733 OR10D3Q8NH80 312 aa17.51■□□□□ 0.39
SHKBP1-225ENST00000600733 SGCZQ96LD1 299 aa17.51■□□□□ 0.39
SHKBP1-225ENST00000600733 PARP11Q9NR21 331 aa17.51■□□□□ 0.39
SHKBP1-225ENST00000600733 TRAPPC6AO75865 159 aa17.51■□□□□ 0.39
SHKBP1-225ENST00000600733 F2RL1P55085 397 aa17.51■□□□□ 0.39
SHKBP1-225ENST00000600733 Q0VFX4 171 aa17.51■□□□□ 0.39
SHKBP1-225ENST00000600733 PIGCQ92535 297 aa17.51■□□□□ 0.39
SHKBP1-225ENST00000600733 GALNT14Q96FL9 552 aa17.51■□□□□ 0.39
SHKBP1-225ENST00000600733 BCO1Q9HAY6 547 aa17.51■□□□□ 0.39
SHKBP1-225ENST00000600733 TIMM10BQ9Y5J6 103 aa17.51■□□□□ 0.39
SHKBP1-225ENST00000600733 F10P00742 488 aa17.5■□□□□ 0.39
SHKBP1-225ENST00000600733 IGHV3-9P01782 118 aa17.5■□□□□ 0.39
SHKBP1-225ENST00000600733 PRKACAP17612 351 aa17.5■□□□□ 0.39
SHKBP1-225ENST00000600733 OTX2P32243 289 aa17.5■□□□□ 0.39
SHKBP1-225ENST00000600733 CLDN15P56746 228 aa17.5■□□□□ 0.39
SHKBP1-225ENST00000600733 PLCXD3Q63HM9 321 aa17.5■□□□□ 0.39
SHKBP1-225ENST00000600733 SKA3Q8IX90 412 aa17.5■□□□□ 0.39
SHKBP1-225ENST00000600733 OR52M1Q8NGK5 317 aa17.5■□□□□ 0.39
SHKBP1-225ENST00000600733 ZFP57Q9NU63 452 aa17.5■□□□□ 0.39
SHKBP1-225ENST00000600733 LRRC3CA6NJW4 275 aa17.5■□□□□ 0.39
SHKBP1-225ENST00000600733 ZNF587BE7ETH6 402 aa17.5■□□□□ 0.39
SHKBP1-225ENST00000600733 CALHM1Q8IU99 346 aa17.5■□□□□ 0.39
SHKBP1-225ENST00000600733 UBAC2Q8NBM4 344 aa17.5■□□□□ 0.39
SHKBP1-225ENST00000600733 GLYATL2Q8WU03 294 aa17.5■□□□□ 0.39
SHKBP1-225ENST00000600733 ABHD3Q8WU67 409 aa17.5■□□□□ 0.39
SHKBP1-225ENST00000600733 KCNE4Q8WWG9 221 aa17.5■□□□□ 0.39
SHKBP1-225ENST00000600733 PLEKHA2Q9HB19 425 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms