RNA–Protein interactions for RNA: ENST00000600137.5

VRK3-219, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 822 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-219ENST00000600137 TNFAIP8O95379 198 aa11.41□□□□□ -0.58
VRK3-219ENST00000600137 HCKP08631 526 aa11.41□□□□□ -0.58
VRK3-219ENST00000600137 BCL3P20749 454 aa11.41□□□□□ -0.58
VRK3-219ENST00000600137 GABRA5P31644 462 aa11.41□□□□□ -0.58
VRK3-219ENST00000600137 PITPNBP48739 271 aa11.41□□□□□ -0.58
VRK3-219ENST00000600137 LCN2P80188 198 aa11.41□□□□□ -0.58
VRK3-219ENST00000600137 TRAM1Q15629 374 aa11.41□□□□□ -0.58
VRK3-219ENST00000600137 KCNJ8Q15842 424 aa11.41□□□□□ -0.58
VRK3-219ENST00000600137 DGUOKQ16854 277 aa11.41□□□□□ -0.58
VRK3-219ENST00000600137 C1orf229Q6ZS94 237 aaPredicted RBP11.41□□□□□ -0.58
VRK3-219ENST00000600137 FAM216BQ8N7L0 139 aa11.41□□□□□ -0.58
VRK3-219ENST00000600137 PXT1Q8NFP0 134 aa11.41□□□□□ -0.58
VRK3-219ENST00000600137 FCGR1BQ92637 280 aa11.41□□□□□ -0.58
VRK3-219ENST00000600137 TMEM186Q96B77 213 aa11.41□□□□□ -0.58
VRK3-219ENST00000600137 SDSLQ96GA7 329 aa11.41□□□□□ -0.58
VRK3-219ENST00000600137 GFI1Q99684 422 aa11.41□□□□□ -0.58
VRK3-219ENST00000600137 SEBOXQ9HB31 216 aaPredicted RBP11.41□□□□□ -0.58
VRK3-219ENST00000600137 RBFOX1Q9NWB1 397 aaKnown RBP11.41□□□□□ -0.58
VRK3-219ENST00000600137 DNAJB11Q9UBS4 358 aa11.41□□□□□ -0.58
VRK3-219ENST00000600137 SHISA3A0PJX4 238 aa11.4□□□□□ -0.58
VRK3-219ENST00000600137 C22orf46C9J442 243 aa11.4□□□□□ -0.58
VRK3-219ENST00000600137 CCRL2O00421 344 aa11.4□□□□□ -0.58
VRK3-219ENST00000600137 DVL1O14640 695 aa11.4□□□□□ -0.58
VRK3-219ENST00000600137 SIGLEC5O15389 551 aa11.4□□□□□ -0.58
VRK3-219ENST00000600137 NXPH2O95156 264 aa11.4□□□□□ -0.58
VRK3-219ENST00000600137 AVPP01185 164 aa11.4□□□□□ -0.58
VRK3-219ENST00000600137 SRMP19623 302 aa11.4□□□□□ -0.58
VRK3-219ENST00000600137 PSMA1P25786 263 aaKnown RBP11.4□□□□□ -0.58
VRK3-219ENST00000600137 MAPK3P27361 379 aaPredicted RBP11.4□□□□□ -0.58
VRK3-219ENST00000600137 PRDX2P32119 198 aa11.4□□□□□ -0.58
VRK3-219ENST00000600137 ZNF93P35789 620 aaPredicted RBP11.4□□□□□ -0.58
VRK3-219ENST00000600137 PTGFRP43088 359 aa11.4□□□□□ -0.58
VRK3-219ENST00000600137 OR3A4PP47883 348 aa11.4□□□□□ -0.58
VRK3-219ENST00000600137 CEBPDP49716 269 aaPredicted RBP11.4□□□□□ -0.58
VRK3-219ENST00000600137 ZNF146Q15072 292 aa11.4□□□□□ -0.58
VRK3-219ENST00000600137 DDI2Q5TDH0 399 aa11.4□□□□□ -0.58
VRK3-219ENST00000600137 CDH26Q8IXH8 852 aa11.4□□□□□ -0.58
VRK3-219ENST00000600137 TSPAN14Q8NG11 270 aa11.4□□□□□ -0.58
VRK3-219ENST00000600137 OR8B3Q8NGG8 313 aa11.4□□□□□ -0.58
VRK3-219ENST00000600137 PHYHIPQ92561 330 aa11.4□□□□□ -0.58
VRK3-219ENST00000600137 THRSPQ92748 146 aa11.4□□□□□ -0.58
VRK3-219ENST00000600137 MUL1Q969V5 352 aa11.4□□□□□ -0.58
VRK3-219ENST00000600137 C1orf147Q96MC9 270 aaPredicted RBP11.4□□□□□ -0.58
VRK3-219ENST00000600137 OR8B2Q96RD0 313 aa11.4□□□□□ -0.58
VRK3-219ENST00000600137 SSBP3Q9BWW4 388 aaPredicted RBP11.4□□□□□ -0.58
VRK3-219ENST00000600137 NEK6Q9HC98 313 aa11.4□□□□□ -0.58
VRK3-219ENST00000600137 HMG20AQ9NP66 347 aa11.4□□□□□ -0.58
VRK3-219ENST00000600137 YAE1D1Q9NRH1 226 aa11.4□□□□□ -0.58
VRK3-219ENST00000600137 HIF1ANQ9NWT6 349 aa11.4□□□□□ -0.58
VRK3-219ENST00000600137 A0A087WXM4 84 aa11.39□□□□□ -0.59
VRK3-219ENST00000600137 TRAV20A0A0B4J274 112 aa11.39□□□□□ -0.59
VRK3-219ENST00000600137 TRDV1A0A1B0GX56 115 aa11.39□□□□□ -0.59
VRK3-219ENST00000600137 A8MV72 311 aaPredicted RBP11.39□□□□□ -0.59
VRK3-219ENST00000600137 TMPRSS2O15393 492 aa11.39□□□□□ -0.59
VRK3-219ENST00000600137 ZNF737O75373 536 aa11.39□□□□□ -0.59
VRK3-219ENST00000600137 FOXH1O75593 365 aa11.39□□□□□ -0.59
VRK3-219ENST00000600137 RGS9O75916 674 aaPredicted RBP11.39□□□□□ -0.59
VRK3-219ENST00000600137 KNG1P01042 644 aa11.39□□□□□ -0.59
VRK3-219ENST00000600137 MAS1P04201 325 aa11.39□□□□□ -0.59
VRK3-219ENST00000600137 SMIM18P0DKX4 95 aa11.39□□□□□ -0.59
VRK3-219ENST00000600137 TMEM225BP0DP42 221 aa11.39□□□□□ -0.59
VRK3-219ENST00000600137 CALCBP10092 127 aa11.39□□□□□ -0.59
VRK3-219ENST00000600137 JUNBP17275 347 aaPredicted RBP11.39□□□□□ -0.59
VRK3-219ENST00000600137 PSMB9P28065 219 aa11.39□□□□□ -0.59
VRK3-219ENST00000600137 PPP3R1P63098 170 aa11.39□□□□□ -0.59
VRK3-219ENST00000600137 SMIM21Q3B7S5 101 aa11.39□□□□□ -0.59
VRK3-219ENST00000600137 ESCO2Q56NI9 601 aa11.39□□□□□ -0.59
VRK3-219ENST00000600137 ELP2Q6IA86 826 aa11.39□□□□□ -0.59
VRK3-219ENST00000600137 FAM166AQ6J272 317 aa11.39□□□□□ -0.59
VRK3-219ENST00000600137 SATL1Q86VE3 508 aa11.39□□□□□ -0.59
VRK3-219ENST00000600137 FAM58AQ8N1B3 248 aa11.39□□□□□ -0.59
VRK3-219ENST00000600137 ZNRF1Q8ND25 227 aa11.39□□□□□ -0.59
VRK3-219ENST00000600137 NR1H4Q96RI1 486 aaPredicted RBP11.39□□□□□ -0.59
VRK3-219ENST00000600137 TMPRSS13Q9BYE2 586 aa11.39□□□□□ -0.59
VRK3-219ENST00000600137 CNTD2Q9H8S5 307 aa11.39□□□□□ -0.59
VRK3-219ENST00000600137 TMEM160Q9NX00 188 aa11.39□□□□□ -0.59
VRK3-219ENST00000600137 CLN8Q9UBY8 286 aa11.39□□□□□ -0.59
VRK3-219ENST00000600137 INAFM1C9JVW0 142 aa11.38□□□□□ -0.59
VRK3-219ENST00000600137 CDRT1O95170 752 aa11.38□□□□□ -0.59
VRK3-219ENST00000600137 OCMP0CE72 109 aaPredicted RBP11.38□□□□□ -0.59
VRK3-219ENST00000600137 GALP22466 123 aa11.38□□□□□ -0.59
VRK3-219ENST00000600137 DUSP1P28562 367 aa11.38□□□□□ -0.59
VRK3-219ENST00000600137 NPY4RP50391 375 aa11.38□□□□□ -0.59
VRK3-219ENST00000600137 GNB2P62879 340 aa11.38□□□□□ -0.59
VRK3-219ENST00000600137 PAX8Q06710 450 aa11.38□□□□□ -0.59
VRK3-219ENST00000600137 NEDD8Q15843 81 aa11.38□□□□□ -0.59
VRK3-219ENST00000600137 HSD17B12Q53GQ0 312 aa11.38□□□□□ -0.59
VRK3-219ENST00000600137 C1orf100Q5SVJ3 147 aa11.38□□□□□ -0.59
VRK3-219ENST00000600137 Q6P435 159 aa11.38□□□□□ -0.59
VRK3-219ENST00000600137 NLRC3Q7RTR2 1065 aa11.38□□□□□ -0.59
VRK3-219ENST00000600137 SLC36A1Q7Z2H8 476 aa11.38□□□□□ -0.59
VRK3-219ENST00000600137 GLCCI1Q86VQ1 547 aa11.38□□□□□ -0.59
VRK3-219ENST00000600137 Q8IYB0 196 aa11.38□□□□□ -0.59
VRK3-219ENST00000600137 LY6G5BQ8NDX9 201 aa11.38□□□□□ -0.59
VRK3-219ENST00000600137 OR4D6Q8NGJ1 314 aa11.38□□□□□ -0.59
VRK3-219ENST00000600137 TNFAIP8L1Q8WVP5 186 aa11.38□□□□□ -0.59
VRK3-219ENST00000600137 MED30Q96HR3 178 aa11.38□□□□□ -0.59
VRK3-219ENST00000600137 SHARPINQ9H0F6 387 aa11.38□□□□□ -0.59
VRK3-219ENST00000600137 RHOFQ9HBH0 211 aa11.38□□□□□ -0.59
VRK3-219ENST00000600137 CKLFQ9UBR5 152 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms