RNA–Protein interactions for RNA: ENST00000600012.5

UPF1-208, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 5

Gene UPF1, Length 501 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-208ENST00000600012 WDR86Q86TI4 376 aa10.67□□□□□ -0.7
UPF1-208ENST00000600012 ANGPTL5Q86XS5 388 aa10.67□□□□□ -0.7
UPF1-208ENST00000600012 MFSD4AQ8N468 514 aa10.67□□□□□ -0.7
UPF1-208ENST00000600012 DTX3Q8N9I9 347 aa10.67□□□□□ -0.7
UPF1-208ENST00000600012 OR5A2Q8NGI9 324 aa10.67□□□□□ -0.7
UPF1-208ENST00000600012 ZFAND2BQ8WV99 257 aa10.67□□□□□ -0.7
UPF1-208ENST00000600012 SLC25A38Q96DW6 304 aa10.67□□□□□ -0.7
UPF1-208ENST00000600012 WDFY2Q96P53 400 aa10.67□□□□□ -0.7
UPF1-208ENST00000600012 MICU1Q9BPX6 476 aa10.67□□□□□ -0.7
UPF1-208ENST00000600012 MRI1Q9BV20 369 aa10.67□□□□□ -0.7
UPF1-208ENST00000600012 OCEL1Q9H607 264 aa10.67□□□□□ -0.7
UPF1-208ENST00000600012 TMEM100Q9NV29 134 aa10.67□□□□□ -0.7
UPF1-208ENST00000600012 ING4Q9UNL4 249 aa10.67□□□□□ -0.7
UPF1-208ENST00000600012 ETV7Q9Y603 341 aa10.67□□□□□ -0.7
UPF1-208ENST00000600012 IGHV3-64DA0A0J9YX35 117 aa10.66□□□□□ -0.7
UPF1-208ENST00000600012 A0A1W2PP11 408 aa10.66□□□□□ -0.7
UPF1-208ENST00000600012 ZSCAN5BA6NJL1 495 aa10.66□□□□□ -0.7
UPF1-208ENST00000600012 OR5B21A6NL26 309 aa10.66□□□□□ -0.7
UPF1-208ENST00000600012 F5H5P2 479 aa10.66□□□□□ -0.7
UPF1-208ENST00000600012 ANGPTL7O43827 346 aa10.66□□□□□ -0.7
UPF1-208ENST00000600012 BPNT1O95861 308 aa10.66□□□□□ -0.7
UPF1-208ENST00000600012 PTGFRP43088 359 aa10.66□□□□□ -0.7
UPF1-208ENST00000600012 GNG3P63215 75 aa10.66□□□□□ -0.7
UPF1-208ENST00000600012 CNIH2Q6PI25 160 aa10.66□□□□□ -0.7
UPF1-208ENST00000600012 LINC00299Q6ZSB3 139 aa10.66□□□□□ -0.7
UPF1-208ENST00000600012 CCDC190Q86UF4 302 aa10.66□□□□□ -0.7
UPF1-208ENST00000600012 CALHM1Q8IU99 346 aa10.66□□□□□ -0.7
UPF1-208ENST00000600012 CMTM4Q8IZR5 234 aa10.66□□□□□ -0.7
UPF1-208ENST00000600012 BATF2Q8N1L9 274 aa10.66□□□□□ -0.7
UPF1-208ENST00000600012 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.66□□□□□ -0.7
UPF1-208ENST00000600012 OR10K1Q8NGX5 313 aa10.66□□□□□ -0.7
UPF1-208ENST00000600012 CLDND2Q8NHS1 167 aa10.66□□□□□ -0.7
UPF1-208ENST00000600012 FAM46BQ96A09 425 aa10.66□□□□□ -0.7
UPF1-208ENST00000600012 CPNE2Q96FN4 548 aaPredicted RBP10.66□□□□□ -0.7
UPF1-208ENST00000600012 DIRAS2Q96HU8 199 aa10.66□□□□□ -0.7
UPF1-208ENST00000600012 C1orf147Q96MC9 270 aaPredicted RBP10.66□□□□□ -0.7
UPF1-208ENST00000600012 GAL3ST1Q99999 423 aa10.66□□□□□ -0.7
UPF1-208ENST00000600012 RTL8AQ9BWD3 113 aa10.66□□□□□ -0.7
UPF1-208ENST00000600012 RHBDL2Q9NX52 303 aa10.66□□□□□ -0.7
UPF1-208ENST00000600012 EXTL2Q9UBQ6 330 aa10.66□□□□□ -0.7
UPF1-208ENST00000600012 ADAM30Q9UKF2 790 aa10.66□□□□□ -0.7
UPF1-208ENST00000600012 WNK2Q9Y3S1 2297 aa10.65□□□□□ -0.7
UPF1-208ENST00000600012 IGKV1-12A0A0C4DH73 117 aa10.65□□□□□ -0.7
UPF1-208ENST00000600012 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP10.65□□□□□ -0.7
UPF1-208ENST00000600012 LDLRAD4O15165 306 aa10.65□□□□□ -0.7
UPF1-208ENST00000600012 IGKV1D-12P01611 117 aa10.65□□□□□ -0.7
UPF1-208ENST00000600012 MSMBP08118 114 aa10.65□□□□□ -0.7
UPF1-208ENST00000600012 TMEM225BP0DP42 221 aa10.65□□□□□ -0.7
UPF1-208ENST00000600012 VSIG8P0DPA2 414 aa10.65□□□□□ -0.7
UPF1-208ENST00000600012 NAT2P11245 290 aa10.65□□□□□ -0.7
UPF1-208ENST00000600012 SERPINA2P20848 420 aa10.65□□□□□ -0.7
UPF1-208ENST00000600012 ALDH3B1P43353 468 aa10.65□□□□□ -0.7
UPF1-208ENST00000600012 HAAOP46952 286 aa10.65□□□□□ -0.7
UPF1-208ENST00000600012 SELENOVP59797 346 aa10.65□□□□□ -0.7
UPF1-208ENST00000600012 UNC119Q13432 240 aa10.65□□□□□ -0.7
UPF1-208ENST00000600012 NKPD1Q17RQ9 610 aa10.65□□□□□ -0.7
UPF1-208ENST00000600012 PRAMEF6Q5VXH4 476 aa10.65□□□□□ -0.7
UPF1-208ENST00000600012 HAGHLQ6PII5 290 aaPredicted RBP10.65□□□□□ -0.7
UPF1-208ENST00000600012 LRRC28Q86X40 367 aaPredicted RBP10.65□□□□□ -0.7
UPF1-208ENST00000600012 OR2Z1Q8NG97 314 aa10.65□□□□□ -0.7
UPF1-208ENST00000600012 OR4M1Q8NGD0 313 aa10.65□□□□□ -0.7
UPF1-208ENST00000600012 OR13G1Q8NGZ3 307 aa10.65□□□□□ -0.7
UPF1-208ENST00000600012 RDH5Q92781 318 aa10.65□□□□□ -0.7
UPF1-208ENST00000600012 TMEM186Q96B77 213 aa10.65□□□□□ -0.7
UPF1-208ENST00000600012 SLC22A4Q9H015 551 aa10.65□□□□□ -0.7
UPF1-208ENST00000600012 ELL3Q9HB65 397 aaPredicted RBP10.65□□□□□ -0.7
UPF1-208ENST00000600012 HIF1ANQ9NWT6 349 aa10.65□□□□□ -0.7
UPF1-208ENST00000600012 A0A1B0GWJ7 208 aa10.64□□□□□ -0.71
UPF1-208ENST00000600012 PLSCR5A0PG75 271 aa10.64□□□□□ -0.71
UPF1-208ENST00000600012 TMEM14DPA8MWL7 114 aa10.64□□□□□ -0.71
UPF1-208ENST00000600012 CLDN25C9JDP6 229 aa10.64□□□□□ -0.71
UPF1-208ENST00000600012 J3QRK9 145 aa10.64□□□□□ -0.71
UPF1-208ENST00000600012 SPRY3O43610 288 aa10.64□□□□□ -0.71
UPF1-208ENST00000600012 SYNGR1O43759 233 aa10.64□□□□□ -0.71
UPF1-208ENST00000600012 CRTAPO75718 401 aaPredicted RBP10.64□□□□□ -0.71
UPF1-208ENST00000600012 VENTXO95231 258 aa10.64□□□□□ -0.71
UPF1-208ENST00000600012 MPIG6BO95866 241 aa10.64□□□□□ -0.71
UPF1-208ENST00000600012 APOA1P02647 267 aa10.64□□□□□ -0.71
UPF1-208ENST00000600012 HPXP02790 462 aa10.64□□□□□ -0.71
UPF1-208ENST00000600012 GRPP07492 148 aa10.64□□□□□ -0.71
UPF1-208ENST00000600012 UBBP0CG47 229 aa10.64□□□□□ -0.71
UPF1-208ENST00000600012 SCAND1P57086 179 aa10.64□□□□□ -0.71
UPF1-208ENST00000600012 TMEM33P57088 247 aa10.64□□□□□ -0.71
UPF1-208ENST00000600012 MRPS11P82912 194 aaKnown RBP10.64□□□□□ -0.71
UPF1-208ENST00000600012 QRFPP83859 136 aa10.64□□□□□ -0.71
UPF1-208ENST00000600012 PDZK1IP1Q13113 114 aa10.64□□□□□ -0.71
UPF1-208ENST00000600012 ZNF846Q147U1 533 aa10.64□□□□□ -0.71
UPF1-208ENST00000600012 SLC22A6Q4U2R8 563 aa10.64□□□□□ -0.71
UPF1-208ENST00000600012 SPANXN2Q5MJ10 180 aa10.64□□□□□ -0.71
UPF1-208ENST00000600012 METAP1DQ6UB28 335 aaPredicted RBP10.64□□□□□ -0.71
UPF1-208ENST00000600012 FAM131AQ6UXB0 335 aa10.64□□□□□ -0.71
UPF1-208ENST00000600012 SLC25A26Q70HW3 274 aa10.64□□□□□ -0.71
UPF1-208ENST00000600012 IZUMO1Q8IYV9 350 aa10.64□□□□□ -0.71
UPF1-208ENST00000600012 TMEM104Q8NE00 496 aa10.64□□□□□ -0.71
UPF1-208ENST00000600012 OR51F2Q8NH61 342 aa10.64□□□□□ -0.71
UPF1-208ENST00000600012 S100ZQ8WXG8 99 aa10.64□□□□□ -0.71
UPF1-208ENST00000600012 SLAMF9Q96A28 289 aa10.64□□□□□ -0.71
UPF1-208ENST00000600012 ELMOD3Q96FG2 381 aa10.64□□□□□ -0.71
UPF1-208ENST00000600012 S100A13Q99584 98 aa10.64□□□□□ -0.71
UPF1-208ENST00000600012 BANF2Q9H503 90 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms