RNA–Protein interactions for RNA: ENST00000597618.5

TRIM28-210, Transcript of tripartite motif containing 28, humanhuman

TSL 2

Gene TRIM28, Length 609 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-210ENST00000597618 TRPM8Q7Z2W7 1104 aa8□□□□□ -1.13
TRIM28-210ENST00000597618 RTN4RL2Q86UN3 420 aa8□□□□□ -1.13
TRIM28-210ENST00000597618 BATF2Q8N1L9 274 aa8□□□□□ -1.13
TRIM28-210ENST00000597618 ABHD12Q8N2K0 398 aa8□□□□□ -1.13
TRIM28-210ENST00000597618 OR8U1Q8NH10 309 aa8□□□□□ -1.13
TRIM28-210ENST00000597618 CREB3L1Q96BA8 519 aa8□□□□□ -1.13
TRIM28-210ENST00000597618 SNX22Q96L94 193 aa8□□□□□ -1.13
TRIM28-210ENST00000597618 DUX3Q96PT4 197 aa8□□□□□ -1.13
TRIM28-210ENST00000597618 CDRT15Q96T59 188 aa8□□□□□ -1.13
TRIM28-210ENST00000597618 BTBD10Q9BSF8 475 aa8□□□□□ -1.13
TRIM28-210ENST00000597618 GORASP2Q9H8Y8 452 aa8□□□□□ -1.13
TRIM28-210ENST00000597618 EFCAB1Q9HAE3 211 aa8□□□□□ -1.13
TRIM28-210ENST00000597618 GPR84Q9NQS5 396 aa8□□□□□ -1.13
TRIM28-210ENST00000597618 HHLA2Q9UM44 414 aa8□□□□□ -1.13
TRIM28-210ENST00000597618 LYVE1Q9Y5Y7 322 aa8□□□□□ -1.13
TRIM28-210ENST00000597618 PQLC2LA1A4F0 135 aa7.99□□□□□ -1.13
TRIM28-210ENST00000597618 FAM183AA6NL82 134 aa7.99□□□□□ -1.13
TRIM28-210ENST00000597618 SERPINE3A8MV23 424 aa7.99□□□□□ -1.13
TRIM28-210ENST00000597618 HMGB1P1B2RPK0 211 aaPredicted RBP7.99□□□□□ -1.13
TRIM28-210ENST00000597618 SELENOFO60613 162 aa7.99□□□□□ -1.13
TRIM28-210ENST00000597618 SNRNP70P08621 437 aaKnown RBP7.99□□□□□ -1.13
TRIM28-210ENST00000597618 FAM106CPP0CH98 169 aa7.99□□□□□ -1.13
TRIM28-210ENST00000597618 COX4I1P13073 169 aa7.99□□□□□ -1.13
TRIM28-210ENST00000597618 H2AFXP16104 143 aaPredicted RBP7.99□□□□□ -1.13
TRIM28-210ENST00000597618 MNDAP41218 407 aa7.99□□□□□ -1.13
TRIM28-210ENST00000597618 SF3A3Q12874 501 aaKnown RBP eCLIP7.99□□□□□ -1.132e-23■□□□□ 8.6
TRIM28-210ENST00000597618 IL24Q13007 206 aa7.99□□□□□ -1.13
TRIM28-210ENST00000597618 CLVS2Q5SYC1 327 aa7.99□□□□□ -1.13
TRIM28-210ENST00000597618 ZFAND6Q6FIF0 208 aa7.99□□□□□ -1.13
TRIM28-210ENST00000597618 ASRGL1Q7L266 308 aa7.99□□□□□ -1.13
TRIM28-210ENST00000597618 KRT77Q7Z794 578 aa7.99□□□□□ -1.13
TRIM28-210ENST00000597618 TRAPPC6BQ86SZ2 158 aa7.99□□□□□ -1.13
TRIM28-210ENST00000597618 SBSPONQ8IVN8 264 aa7.99□□□□□ -1.13
TRIM28-210ENST00000597618 OR51E1Q8TCB6 317 aa7.99□□□□□ -1.13
TRIM28-210ENST00000597618 OTULINQ96BN8 352 aa7.99□□□□□ -1.13
TRIM28-210ENST00000597618 NOL4LQ96MY1 436 aaPredicted RBP7.99□□□□□ -1.13
TRIM28-210ENST00000597618 CITED4Q96RK1 184 aa7.99□□□□□ -1.13
TRIM28-210ENST00000597618 PKIBQ9C010 78 aa7.99□□□□□ -1.13
TRIM28-210ENST00000597618 ZMAT4Q9H898 229 aa7.99□□□□□ -1.13
TRIM28-210ENST00000597618 MED20Q9H944 212 aa7.99□□□□□ -1.13
TRIM28-210ENST00000597618 SPAG4Q9NPE6 437 aa7.99□□□□□ -1.13
TRIM28-210ENST00000597618 ARMC1Q9NVT9 282 aa7.99□□□□□ -1.13
TRIM28-210ENST00000597618 FAM206AQ9NX38 181 aa7.99□□□□□ -1.13
TRIM28-210ENST00000597618 DNAJB9Q9UBS3 223 aa7.99□□□□□ -1.13
TRIM28-210ENST00000597618 SCOCQ9UIL1 159 aa7.99□□□□□ -1.13
TRIM28-210ENST00000597618 TMEM269A0A1B0GVZ9 245 aa7.98□□□□□ -1.13
TRIM28-210ENST00000597618 TMEM82A0PJX8 343 aa7.98□□□□□ -1.13
TRIM28-210ENST00000597618 ARRDC5A6NEK1 342 aa7.98□□□□□ -1.13
TRIM28-210ENST00000597618 OOSP1A8MZH6 123 aa7.98□□□□□ -1.13
TRIM28-210ENST00000597618 TNFRSF11BO00300 401 aa7.98□□□□□ -1.13
TRIM28-210ENST00000597618 DLGAP1O14490 977 aa7.98□□□□□ -1.13
TRIM28-210ENST00000597618 DHRS3O75911 302 aa7.98□□□□□ -1.13
TRIM28-210ENST00000597618 SOX14O95416 240 aa7.98□□□□□ -1.13
TRIM28-210ENST00000597618 LY86O95711 162 aa7.98□□□□□ -1.13
TRIM28-210ENST00000597618 GASTP01350 101 aa7.98□□□□□ -1.13
TRIM28-210ENST00000597618 IGLV1-47P01700 117 aa7.98□□□□□ -1.13
TRIM28-210ENST00000597618 IGLV3-1P01715 115 aa7.98□□□□□ -1.13
TRIM28-210ENST00000597618 PEX2P28328 305 aa7.98□□□□□ -1.13
TRIM28-210ENST00000597618 HMGA2P52926 109 aa7.98□□□□□ -1.13
TRIM28-210ENST00000597618 PSME3P61289 254 aa7.98□□□□□ -1.13
TRIM28-210ENST00000597618 GRK1Q15835 563 aa7.98□□□□□ -1.13
TRIM28-210ENST00000597618 TPTE2P1Q5T6R2 138 aa7.98□□□□□ -1.13
TRIM28-210ENST00000597618 PRAMEF5Q5TYX0 476 aa7.98□□□□□ -1.13
TRIM28-210ENST00000597618 SLX4IPQ5VYV7 408 aa7.98□□□□□ -1.13
TRIM28-210ENST00000597618 FOXRED2Q8IWF2 684 aa7.98□□□□□ -1.13
TRIM28-210ENST00000597618 TPRX1Q8N7U7 411 aa7.98□□□□□ -1.13
TRIM28-210ENST00000597618 AQP11Q8NBQ7 271 aa7.98□□□□□ -1.13
TRIM28-210ENST00000597618 CEP19Q96LK0 163 aa7.98□□□□□ -1.13
TRIM28-210ENST00000597618 PBOV1Q9GZY1 135 aa7.98□□□□□ -1.13
TRIM28-210ENST00000597618 OR51V1Q9H2C8 321 aa7.98□□□□□ -1.13
TRIM28-210ENST00000597618 GAL3ST2Q9H3Q3 398 aa7.98□□□□□ -1.13
TRIM28-210ENST00000597618 PCDHB16Q9NRJ7 776 aa7.98□□□□□ -1.13
TRIM28-210ENST00000597618 GPR173Q9NS66 373 aa7.98□□□□□ -1.13
TRIM28-210ENST00000597618 MAGEL2Q9UJ55 1249 aa7.98□□□□□ -1.13
TRIM28-210ENST00000597618 KLHDC2Q9Y2U9 406 aa7.98□□□□□ -1.13
TRIM28-210ENST00000597618 UBE2J1Q9Y385 318 aaPredicted RBP7.98□□□□□ -1.13
TRIM28-210ENST00000597618 SIRT4Q9Y6E7 314 aaPredicted RBP7.98□□□□□ -1.13
TRIM28-210ENST00000597618 PLECQ15149 4684 aaKnown RBP7.98□□□□□ -1.13
TRIM28-210ENST00000597618 BUB1B-PAK6H3BSN5 160 aa7.97□□□□□ -1.13
TRIM28-210ENST00000597618 TOR1AO14656 332 aa7.97□□□□□ -1.13
TRIM28-210ENST00000597618 FGF16O43320 207 aa7.97□□□□□ -1.13
TRIM28-210ENST00000597618 MMP23AO75900 390 aa7.97□□□□□ -1.13
TRIM28-210ENST00000597618 CCNB2O95067 398 aa7.97□□□□□ -1.13
TRIM28-210ENST00000597618 GABRR1P24046 479 aa7.97□□□□□ -1.13
TRIM28-210ENST00000597618 CD34P28906 385 aa7.97□□□□□ -1.13
TRIM28-210ENST00000597618 ESRRGP62508 458 aa7.97□□□□□ -1.13
TRIM28-210ENST00000597618 KIR2DS1Q14954 304 aa7.97□□□□□ -1.13
TRIM28-210ENST00000597618 HLA-DRB5Q30154 266 aa7.97□□□□□ -1.13
TRIM28-210ENST00000597618 DEFB136Q30KP8 78 aa7.97□□□□□ -1.13
TRIM28-210ENST00000597618 ZNF829Q3KNS6 432 aaPredicted RBP7.97□□□□□ -1.13
TRIM28-210ENST00000597618 ZNF260Q3ZCT1 412 aa7.97□□□□□ -1.13
TRIM28-210ENST00000597618 TMEM42Q69YG0 159 aa7.97□□□□□ -1.13
TRIM28-210ENST00000597618 TEX38Q6PEX7 206 aa7.97□□□□□ -1.13
TRIM28-210ENST00000597618 DEGS2Q6QHC5 323 aa7.97□□□□□ -1.13
TRIM28-210ENST00000597618 HEPN1Q6WQI6 88 aa7.97□□□□□ -1.13
TRIM28-210ENST00000597618 ANGPTL5Q86XS5 388 aa7.97□□□□□ -1.13
TRIM28-210ENST00000597618 THNSL2Q86YJ6 484 aa7.97□□□□□ -1.13
TRIM28-210ENST00000597618 STPG2Q8N412 459 aa7.97□□□□□ -1.13
TRIM28-210ENST00000597618 C5orf56Q8N8D9 126 aa7.97□□□□□ -1.13
TRIM28-210ENST00000597618 ISOC1Q96CN7 298 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms