RNA–Protein interactions for RNA: ENST00000596549.5

LIG1-212, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-212ENST00000596549 GMPPBQ9Y5P6 360 aa10.63□□□□□ -0.71
LIG1-212ENST00000596549 PKD1L1Q8TDX9 2849 aa10.63□□□□□ -0.71
LIG1-212ENST00000596549 TRRAPQ9Y4A5 3859 aa10.62□□□□□ -0.71
LIG1-212ENST00000596549 DAPL1A0PJW8 107 aa10.62□□□□□ -0.71
LIG1-212ENST00000596549 MEX3AA1L020 520 aaKnown RBP10.62□□□□□ -0.71
LIG1-212ENST00000596549 MEGF11A6BM72 1044 aa10.62□□□□□ -0.71
LIG1-212ENST00000596549 K7N7A8 449 aa10.62□□□□□ -0.71
LIG1-212ENST00000596549 INMTO95050 263 aa10.62□□□□□ -0.71
LIG1-212ENST00000596549 IGHA1P01876 353 aa10.62□□□□□ -0.71
LIG1-212ENST00000596549 AZGP1P25311 298 aaKnown RBP10.62□□□□□ -0.71
LIG1-212ENST00000596549 NPBWR2P48146 333 aa10.62□□□□□ -0.71
LIG1-212ENST00000596549 PROK1P58294 105 aa10.62□□□□□ -0.71
LIG1-212ENST00000596549 MIDNQ504T8 468 aa10.62□□□□□ -0.71
LIG1-212ENST00000596549 TMEM244Q5VVB8 128 aa10.62□□□□□ -0.71
LIG1-212ENST00000596549 ZNF782Q6ZMW2 699 aaPredicted RBP10.62□□□□□ -0.71
LIG1-212ENST00000596549 GDPGP1Q6ZNW5 385 aa10.62□□□□□ -0.71
LIG1-212ENST00000596549 PQLC1Q8N2U9 271 aa10.62□□□□□ -0.71
LIG1-212ENST00000596549 ACBD7Q8N6N7 88 aa10.62□□□□□ -0.71
LIG1-212ENST00000596549 ASCC1Q8N9N2 400 aaKnown RBP10.62□□□□□ -0.71
LIG1-212ENST00000596549 BEND2Q8NDZ0 799 aa10.62□□□□□ -0.71
LIG1-212ENST00000596549 DNAAF1Q8NEP3 725 aa10.62□□□□□ -0.71
LIG1-212ENST00000596549 OR5D13Q8NGL4 314 aa10.62□□□□□ -0.71
LIG1-212ENST00000596549 EMG1Q92979 244 aaKnown RBP10.62□□□□□ -0.71
LIG1-212ENST00000596549 C9orf16Q9BUW7 83 aa10.62□□□□□ -0.71
LIG1-212ENST00000596549 ADI1Q9BV57 179 aa10.62□□□□□ -0.71
LIG1-212ENST00000596549 ALG8Q9BVK2 526 aa10.62□□□□□ -0.71
LIG1-212ENST00000596549 RBFOX1Q9NWB1 397 aaKnown RBP10.62□□□□□ -0.71
LIG1-212ENST00000596549 MEGF8Q7Z7M0 2845 aa10.61□□□□□ -0.71
LIG1-212ENST00000596549 TMEM82A0PJX8 343 aa10.61□□□□□ -0.71
LIG1-212ENST00000596549 OR4C45A6NMZ5 311 aa10.61□□□□□ -0.71
LIG1-212ENST00000596549 C17orf98A8MV24 154 aa10.61□□□□□ -0.71
LIG1-212ENST00000596549 H3BUX3 64 aa10.61□□□□□ -0.71
LIG1-212ENST00000596549 PAHP00439 452 aa10.61□□□□□ -0.71
LIG1-212ENST00000596549 HTR1AP08908 422 aa10.61□□□□□ -0.71
LIG1-212ENST00000596549 BCL3P20749 454 aa10.61□□□□□ -0.71
LIG1-212ENST00000596549 COX7A1P24310 79 aa10.61□□□□□ -0.71
LIG1-212ENST00000596549 POU3F4P49335 361 aa10.61□□□□□ -0.71
LIG1-212ENST00000596549 CCR9P51686 369 aa10.61□□□□□ -0.71
LIG1-212ENST00000596549 ACTA2P62736 377 aa10.61□□□□□ -0.71
LIG1-212ENST00000596549 ACTG2P63267 376 aa10.61□□□□□ -0.71
LIG1-212ENST00000596549 BRICD5Q6PL45 260 aa10.61□□□□□ -0.71
LIG1-212ENST00000596549 C17orf107Q6ZR85 190 aa10.61□□□□□ -0.71
LIG1-212ENST00000596549 UTS2BQ765I0 119 aa10.61□□□□□ -0.71
LIG1-212ENST00000596549 OR8H2Q8N162 312 aa10.61□□□□□ -0.71
LIG1-212ENST00000596549 ZSCAN4Q8NAM6 433 aaPredicted RBP10.61□□□□□ -0.71
LIG1-212ENST00000596549 RFT1Q96AA3 541 aa10.61□□□□□ -0.71
LIG1-212ENST00000596549 FGGYQ96C11 551 aa10.61□□□□□ -0.71
LIG1-212ENST00000596549 ISG20L2Q9H9L3 353 aaKnown RBP10.61□□□□□ -0.71
LIG1-212ENST00000596549 AMBNQ9NP70 447 aa10.61□□□□□ -0.71
LIG1-212ENST00000596549 SF3B6Q9Y3B4 125 aaKnown RBP10.61□□□□□ -0.71
LIG1-212ENST00000596549 RNF114Q9Y508 228 aa10.61□□□□□ -0.71
LIG1-212ENST00000596549 IGKV1-12A0A0C4DH73 117 aa10.6□□□□□ -0.71
LIG1-212ENST00000596549 TRBV2A0A0J9YWF9 115 aa10.6□□□□□ -0.71
LIG1-212ENST00000596549 BTBD17A6NE02 478 aa10.6□□□□□ -0.71
LIG1-212ENST00000596549 E9PI62 339 aa10.6□□□□□ -0.71
LIG1-212ENST00000596549 J3QLW9 94 aa10.6□□□□□ -0.71
LIG1-212ENST00000596549 PSPNO60542 156 aa10.6□□□□□ -0.71
LIG1-212ENST00000596549 CLPXO76031 633 aa10.6□□□□□ -0.71
LIG1-212ENST00000596549 HAND1O96004 215 aa10.6□□□□□ -0.71
LIG1-212ENST00000596549 IGKV1D-12P01611 117 aa10.6□□□□□ -0.71
LIG1-212ENST00000596549 CALCBP10092 127 aa10.6□□□□□ -0.71
LIG1-212ENST00000596549 ZNF19P17023 458 aa10.6□□□□□ -0.71
LIG1-212ENST00000596549 ATF1P18846 271 aa10.6□□□□□ -0.71
LIG1-212ENST00000596549 RBP2P50120 134 aa10.6□□□□□ -0.71
LIG1-212ENST00000596549 EDDM3BP56851 147 aa10.6□□□□□ -0.71
LIG1-212ENST00000596549 ALKBH1Q13686 389 aaKnown RBP10.6□□□□□ -0.71
LIG1-212ENST00000596549 GALEQ14376 348 aa10.6□□□□□ -0.71
LIG1-212ENST00000596549 LDLRAD2Q5SZI1 272 aa10.6□□□□□ -0.71
LIG1-212ENST00000596549 DHRS7BQ6IAN0 325 aaPredicted RBP10.6□□□□□ -0.71
LIG1-212ENST00000596549 KCTD20Q7Z5Y7 419 aa10.6□□□□□ -0.71
LIG1-212ENST00000596549 LHFPL4Q7Z7J7 247 aa10.6□□□□□ -0.71
LIG1-212ENST00000596549 LHFPL3Q86UP9 236 aa10.6□□□□□ -0.71
LIG1-212ENST00000596549 TPRX1Q8N7U7 411 aa10.6□□□□□ -0.71
LIG1-212ENST00000596549 OR52N4Q8NGI2 321 aa10.6□□□□□ -0.71
LIG1-212ENST00000596549 OR13C9Q8NGT0 318 aa10.6□□□□□ -0.71
LIG1-212ENST00000596549 OR5R1Q8NH85 324 aa10.6□□□□□ -0.71
LIG1-212ENST00000596549 RHOXF1Q8NHV9 184 aa10.6□□□□□ -0.71
LIG1-212ENST00000596549 OPALINQ96PE5 141 aa10.6□□□□□ -0.71
LIG1-212ENST00000596549 SPACA5Q96QH8 159 aa10.6□□□□□ -0.71
LIG1-212ENST00000596549 HHLA2Q9UM44 414 aa10.6□□□□□ -0.71
LIG1-212ENST00000596549 TET2Q6N021 2002 aaPredicted RBP10.6□□□□□ -0.71
LIG1-212ENST00000596549 LOC100130705A0A1B0GUX0 176 aa10.59□□□□□ -0.71
LIG1-212ENST00000596549 A0A1W2PPH5 198 aa10.59□□□□□ -0.71
LIG1-212ENST00000596549 ODF3BA8MYP8 253 aa10.59□□□□□ -0.71
LIG1-212ENST00000596549 WIPF1O43516 503 aa10.59□□□□□ -0.71
LIG1-212ENST00000596549 TSPAN9O75954 239 aa10.59□□□□□ -0.71
LIG1-212ENST00000596549 SERPINA3P01011 423 aa10.59□□□□□ -0.71
LIG1-212ENST00000596549 CHRM2P08172 466 aa10.59□□□□□ -0.71
LIG1-212ENST00000596549 ZNF20P17024 532 aa10.59□□□□□ -0.71
LIG1-212ENST00000596549 DUSP1P28562 367 aa10.59□□□□□ -0.71
LIG1-212ENST00000596549 ATP1B3P54709 279 aa10.59□□□□□ -0.71
LIG1-212ENST00000596549 SNU13P55769 128 aaKnown RBP10.59□□□□□ -0.71
LIG1-212ENST00000596549 ZNF146Q15072 292 aa10.59□□□□□ -0.71
LIG1-212ENST00000596549 TREML4Q6UXN2 200 aa10.59□□□□□ -0.71
LIG1-212ENST00000596549 ZBTB49Q6ZSB9 765 aa10.59□□□□□ -0.71
LIG1-212ENST00000596549 LHFPL2Q6ZUX7 228 aa10.59□□□□□ -0.71
LIG1-212ENST00000596549 EGFL6Q8IUX8 553 aa10.59□□□□□ -0.71
LIG1-212ENST00000596549 DYNAPQ8N1N2 210 aa10.59□□□□□ -0.71
LIG1-212ENST00000596549 SYS1Q8N2H4 156 aa10.59□□□□□ -0.71
LIG1-212ENST00000596549 OR52I1Q8NGK6 324 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms