RNA–Protein interactions for RNA: ENST00000595659.5

CCDC9-202, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 356 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-202ENST00000595659 TMEM82A0PJX8 343 aa13.79□□□□□ -0.2
CCDC9-202ENST00000595659 C17orf98A8MV24 154 aa13.79□□□□□ -0.2
CCDC9-202ENST00000595659 ZNF737O75373 536 aa13.79□□□□□ -0.2
CCDC9-202ENST00000595659 CHRM2P08172 466 aa13.79□□□□□ -0.2
CCDC9-202ENST00000595659 ZNF728P0DKX0 622 aa13.79□□□□□ -0.2
CCDC9-202ENST00000595659 VSIG10L2P0DP72 767 aa13.79□□□□□ -0.2
CCDC9-202ENST00000595659 FCGR1AP12314 374 aa13.79□□□□□ -0.2
CCDC9-202ENST00000595659 DUSP1P28562 367 aa13.79□□□□□ -0.2
CCDC9-202ENST00000595659 KIR3DL2P43630 455 aa13.79□□□□□ -0.2
CCDC9-202ENST00000595659 FUT6P51993 359 aa13.79□□□□□ -0.2
CCDC9-202ENST00000595659 EFNB2P52799 333 aa13.79□□□□□ -0.2
CCDC9-202ENST00000595659 SNU13P55769 128 aaKnown RBP13.79□□□□□ -0.2
CCDC9-202ENST00000595659 ZNF85Q03923 595 aa13.79□□□□□ -0.2
CCDC9-202ENST00000595659 DYNC1I2Q13409 638 aaKnown RBP13.79□□□□□ -0.2
CCDC9-202ENST00000595659 HABP2Q14520 560 aaPredicted RBP13.79□□□□□ -0.2
CCDC9-202ENST00000595659 HERPUD1Q15011 391 aa13.79□□□□□ -0.2
CCDC9-202ENST00000595659 FAM189A2Q15884 450 aa13.79□□□□□ -0.2
CCDC9-202ENST00000595659 LDLRAD2Q5SZI1 272 aa13.79□□□□□ -0.2
CCDC9-202ENST00000595659 Q6ZTK2 550 aa13.79□□□□□ -0.2
CCDC9-202ENST00000595659 GDPD3Q7L5L3 318 aa13.79□□□□□ -0.2
CCDC9-202ENST00000595659 EGFL6Q8IUX8 553 aa13.79□□□□□ -0.2
CCDC9-202ENST00000595659 KLHDC1Q8N7A1 406 aa13.79□□□□□ -0.2
CCDC9-202ENST00000595659 TPRX1Q8N7U7 411 aa13.79□□□□□ -0.2
CCDC9-202ENST00000595659 EMG1Q92979 244 aaKnown RBP13.79□□□□□ -0.2
CCDC9-202ENST00000595659 GABARAPL3Q9BY60 117 aa13.79□□□□□ -0.2
CCDC9-202ENST00000595659 CHST6Q9GZX3 395 aa13.79□□□□□ -0.2
CCDC9-202ENST00000595659 ENOPH1Q9UHY7 261 aa13.79□□□□□ -0.2
CCDC9-202ENST00000595659 LOC107986453A0A1B0GWG9 222 aa13.78□□□□□ -0.2
CCDC9-202ENST00000595659 SULT1C4O75897 302 aa13.78□□□□□ -0.2
CCDC9-202ENST00000595659 SERPINA3P01011 423 aa13.78□□□□□ -0.2
CCDC9-202ENST00000595659 JUNBP17275 347 aaPredicted RBP13.78□□□□□ -0.2
CCDC9-202ENST00000595659 NPBWR2P48146 333 aa13.78□□□□□ -0.2
CCDC9-202ENST00000595659 SSX2Q16385 188 aa13.78□□□□□ -0.2
CCDC9-202ENST00000595659 CCBE1Q6UXH8 406 aaPredicted RBP13.78□□□□□ -0.2
CCDC9-202ENST00000595659 TMEM219Q86XT9 240 aa13.78□□□□□ -0.2
CCDC9-202ENST00000595659 LYG1Q8N1E2 194 aa13.78□□□□□ -0.2
CCDC9-202ENST00000595659 OR8J1Q8NGP2 316 aa13.78□□□□□ -0.2
CCDC9-202ENST00000595659 OR2T6Q8NHC8 308 aa13.78□□□□□ -0.2
CCDC9-202ENST00000595659 RNF166Q96A37 237 aaPredicted RBP13.78□□□□□ -0.2
CCDC9-202ENST00000595659 ADAT3Q96EY9 351 aaPredicted RBP13.78□□□□□ -0.2
CCDC9-202ENST00000595659 BORCS8Q96FH0 119 aa13.78□□□□□ -0.2
CCDC9-202ENST00000595659 CENPNQ96H22 339 aaPredicted RBP13.78□□□□□ -0.2
CCDC9-202ENST00000595659 OSBPL10Q9BXB5 764 aa13.78□□□□□ -0.2
CCDC9-202ENST00000595659 CHST5Q9GZS9 411 aa13.78□□□□□ -0.2
CCDC9-202ENST00000595659 RBFOX1Q9NWB1 397 aaKnown RBP13.78□□□□□ -0.2
CCDC9-202ENST00000595659 FAM90A8PA6NJQ4 464 aa13.77□□□□□ -0.21
CCDC9-202ENST00000595659 GATBO75879 557 aaKnown RBP13.77□□□□□ -0.21
CCDC9-202ENST00000595659 IGHA1P01876 353 aa13.77□□□□□ -0.21
CCDC9-202ENST00000595659 GABRR1P24046 479 aa13.77□□□□□ -0.21
CCDC9-202ENST00000595659 POU3F4P49335 361 aa13.77□□□□□ -0.21
CCDC9-202ENST00000595659 RASSF2P50749 326 aa13.77□□□□□ -0.21
CCDC9-202ENST00000595659 AANATQ16613 207 aa13.77□□□□□ -0.21
CCDC9-202ENST00000595659 TCF23Q7RTU1 214 aa13.77□□□□□ -0.21
CCDC9-202ENST00000595659 FAM220AQ7Z4H9 259 aa13.77□□□□□ -0.21
CCDC9-202ENST00000595659 OR52N4Q8NGI2 321 aa13.77□□□□□ -0.21
CCDC9-202ENST00000595659 OR13D1Q8NGV5 346 aa13.77□□□□□ -0.21
CCDC9-202ENST00000595659 FGGYQ96C11 551 aa13.77□□□□□ -0.21
CCDC9-202ENST00000595659 NPFFR1Q9GZQ6 430 aa13.77□□□□□ -0.21
CCDC9-202ENST00000595659 RAB18Q9NP72 206 aa13.77□□□□□ -0.21
CCDC9-202ENST00000595659 IGKV1-9A0A0C4DH69 117 aa13.76□□□□□ -0.21
CCDC9-202ENST00000595659 ODF3BA8MYP8 253 aa13.76□□□□□ -0.21
CCDC9-202ENST00000595659 ENTPD6O75354 484 aa13.76□□□□□ -0.21
CCDC9-202ENST00000595659 HAND1O96004 215 aa13.76□□□□□ -0.21
CCDC9-202ENST00000595659 IGHV1-8P0DP01 117 aa13.76□□□□□ -0.21
CCDC9-202ENST00000595659 BCL3P20749 454 aa13.76□□□□□ -0.21
CCDC9-202ENST00000595659 CDC42P60953 191 aa13.76□□□□□ -0.21
CCDC9-202ENST00000595659 GRK1Q15835 563 aa13.76□□□□□ -0.21
CCDC9-202ENST00000595659 OR8H2Q8N162 312 aa13.76□□□□□ -0.21
CCDC9-202ENST00000595659 OR2G2Q8NGZ5 317 aa13.76□□□□□ -0.21
CCDC9-202ENST00000595659 PYDC1Q8WXC3 89 aa13.76□□□□□ -0.21
CCDC9-202ENST00000595659 RFKQ969G6 155 aa13.76□□□□□ -0.21
CCDC9-202ENST00000595659 RFT1Q96AA3 541 aa13.76□□□□□ -0.21
CCDC9-202ENST00000595659 SNX22Q96L94 193 aa13.76□□□□□ -0.21
CCDC9-202ENST00000595659 ZNF714Q96N38 554 aa13.76□□□□□ -0.21
CCDC9-202ENST00000595659 ABCB10Q9NRK6 738 aa13.76□□□□□ -0.21
CCDC9-202ENST00000595659 IMPAD1Q9NX62 359 aa13.76□□□□□ -0.21
CCDC9-202ENST00000595659 FRRS1LQ9P0K9 344 aa13.76□□□□□ -0.21
CCDC9-202ENST00000595659 AASSQ9UDR5 926 aa13.76□□□□□ -0.21
CCDC9-202ENST00000595659 HILPDAQ9Y5L2 63 aa13.76□□□□□ -0.21
CCDC9-202ENST00000595659 CIB2O75838 187 aa13.75□□□□□ -0.21
CCDC9-202ENST00000595659 ATP5HO75947 161 aa13.75□□□□□ -0.21
CCDC9-202ENST00000595659 UBCP0CG48 685 aaKnown RBP13.75□□□□□ -0.21
CCDC9-202ENST00000595659 RBP2P50120 134 aa13.75□□□□□ -0.21
CCDC9-202ENST00000595659 ATP1B3P54709 279 aa13.75□□□□□ -0.21
CCDC9-202ENST00000595659 MTCP1P56278 107 aa13.75□□□□□ -0.21
CCDC9-202ENST00000595659 OR12D2P58182 307 aa13.75□□□□□ -0.21
CCDC9-202ENST00000595659 NANOS3P60323 173 aaKnown RBP13.75□□□□□ -0.21
CCDC9-202ENST00000595659 ISL1P61371 349 aa13.75□□□□□ -0.21
CCDC9-202ENST00000595659 TMED1Q13445 227 aa13.75□□□□□ -0.21
CCDC9-202ENST00000595659 CNN3Q15417 329 aaKnown RBP13.75□□□□□ -0.21
CCDC9-202ENST00000595659 ZIK1Q3SY52 487 aaPredicted RBP13.75□□□□□ -0.21
CCDC9-202ENST00000595659 ZNF626Q68DY1 528 aa13.75□□□□□ -0.21
CCDC9-202ENST00000595659 RNF144BQ7Z419 303 aa13.75□□□□□ -0.21
CCDC9-202ENST00000595659 CCDC54Q8NEL0 328 aa13.75□□□□□ -0.21
CCDC9-202ENST00000595659 OR4S1Q8NGB4 309 aa13.75□□□□□ -0.21
CCDC9-202ENST00000595659 OR11H6Q8NGC7 330 aa13.75□□□□□ -0.21
CCDC9-202ENST00000595659 RNFT2Q96EX2 444 aa13.75□□□□□ -0.21
CCDC9-202ENST00000595659 OR5M11Q96RB7 305 aa13.75□□□□□ -0.21
CCDC9-202ENST00000595659 RANBP3Q9H6Z4 567 aaPredicted RBP13.75□□□□□ -0.21
CCDC9-202ENST00000595659 ZNF702PQ9H963 129 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms