RNA–Protein interactions for RNA: ENST00000593919.5

VRK3-205, Transcript of vaccinia related kinase 3, humanhuman

TSL 1 (best) BASIC

Gene VRK3, Length 1,979 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-205ENST00000593919 AQP3Q92482 292 aa11.31□□□□□ -0.6
VRK3-205ENST00000593919 C1orf147Q96MC9 270 aaPredicted RBP11.31□□□□□ -0.6
VRK3-205ENST00000593919 CITED4Q96RK1 184 aa11.31□□□□□ -0.6
VRK3-205ENST00000593919 SLC7A11Q9UPY5 501 aa11.31□□□□□ -0.6
VRK3-205ENST00000593919 UBE2QL1A1L167 161 aa11.3□□□□□ -0.6
VRK3-205ENST00000593919 ANKRD30BLA7E2S9 258 aa11.3□□□□□ -0.6
VRK3-205ENST00000593919 TMEM14DPA8MWL7 114 aa11.3□□□□□ -0.6
VRK3-205ENST00000593919 GNB3P16520 340 aa11.3□□□□□ -0.6
VRK3-205ENST00000593919 GNLYP22749 145 aa11.3□□□□□ -0.6
VRK3-205ENST00000593919 FUT6P51993 359 aa11.3□□□□□ -0.6
VRK3-205ENST00000593919 PSG7Q13046 419 aa11.3□□□□□ -0.6
VRK3-205ENST00000593919 FBXL19-AS1Q494R0 122 aa11.3□□□□□ -0.6
VRK3-205ENST00000593919 IDO2Q6ZQW0 420 aa11.3□□□□□ -0.6
VRK3-205ENST00000593919 C1QL2Q7Z5L3 287 aa11.3□□□□□ -0.6
VRK3-205ENST00000593919 ZDHHC23Q8IYP9 409 aa11.3□□□□□ -0.6
VRK3-205ENST00000593919 LILRB2Q8N423 598 aa11.3□□□□□ -0.6
VRK3-205ENST00000593919 OR8H1Q8NGG4 311 aa11.3□□□□□ -0.6
VRK3-205ENST00000593919 NICN1Q9BSH3 213 aa11.3□□□□□ -0.6
VRK3-205ENST00000593919 CHST6Q9GZX3 395 aa11.3□□□□□ -0.6
VRK3-205ENST00000593919 G3V3Q6 166 aa11.3□□□□□ -0.6
VRK3-205ENST00000593919 MPIG6BO95866 241 aa11.3□□□□□ -0.6
VRK3-205ENST00000593919 NAT2P11245 290 aa11.3□□□□□ -0.6
VRK3-205ENST00000593919 CD40P25942 277 aa11.3□□□□□ -0.6
VRK3-205ENST00000593919 SSTR2P30874 369 aa11.3□□□□□ -0.6
VRK3-205ENST00000593919 TSPAN5P62079 268 aa11.3□□□□□ -0.6
VRK3-205ENST00000593919 CEACAM21Q3KPI0 293 aa11.3□□□□□ -0.6
VRK3-205ENST00000593919 ALKBH6Q3KRA9 238 aa11.3□□□□□ -0.6
VRK3-205ENST00000593919 SCGB2B2Q4G0G5 96 aa11.3□□□□□ -0.6
VRK3-205ENST00000593919 BPIFB2Q8N4F0 458 aa11.3□□□□□ -0.6
VRK3-205ENST00000593919 GVQW1Q8N7I0 195 aa11.3□□□□□ -0.6
VRK3-205ENST00000593919 GALNT11Q8NCW6 608 aa11.3□□□□□ -0.6
VRK3-205ENST00000593919 OR10R2Q8NGX6 335 aa11.3□□□□□ -0.6
VRK3-205ENST00000593919 CA5BP1Q8WTZ4 195 aa11.3□□□□□ -0.6
VRK3-205ENST00000593919 TNFAIP8L1Q8WVP5 186 aa11.3□□□□□ -0.6
VRK3-205ENST00000593919 WDR89Q96FK6 387 aaPredicted RBP11.3□□□□□ -0.6
VRK3-205ENST00000593919 CPNE2Q96FN4 548 aaPredicted RBP11.3□□□□□ -0.6
VRK3-205ENST00000593919 WFIKKN1Q96NZ8 548 aa11.3□□□□□ -0.6
VRK3-205ENST00000593919 SELENOIQ9C0D9 397 aa11.3□□□□□ -0.6
VRK3-205ENST00000593919 FGF23Q9GZV9 251 aaPredicted RBP11.3□□□□□ -0.6
VRK3-205ENST00000593919 BANF2Q9H503 90 aa11.3□□□□□ -0.6
VRK3-205ENST00000593919 ERRFI1Q9UJM3 462 aaPredicted RBP11.3□□□□□ -0.6
VRK3-205ENST00000593919 FZR1Q9UM11 496 aa11.3□□□□□ -0.6
VRK3-205ENST00000593919 FLNCQ14315 2725 aa11.29□□□□□ -0.6
VRK3-205ENST00000593919 PKDREJQ9NTG1 2253 aa11.29□□□□□ -0.6
VRK3-205ENST00000593919 ANKRD34BA5PLL1 514 aa11.29□□□□□ -0.6
VRK3-205ENST00000593919 IQCF6A8MYZ5 107 aa11.29□□□□□ -0.6
VRK3-205ENST00000593919 ATP6V1G2-DDX39BF2Z307 99 aa11.29□□□□□ -0.6
VRK3-205ENST00000593919 SIX6O95475 246 aa11.29□□□□□ -0.6
VRK3-205ENST00000593919 PLATP00750 562 aa11.29□□□□□ -0.6
VRK3-205ENST00000593919 TUBG1P23258 451 aa11.29□□□□□ -0.6
VRK3-205ENST00000593919 CA6P23280 308 aa11.29□□□□□ -0.6
VRK3-205ENST00000593919 GRNP28799 593 aaKnown RBP11.29□□□□□ -0.6
VRK3-205ENST00000593919 ALDH3B1P43353 468 aa11.29□□□□□ -0.6
VRK3-205ENST00000593919 ZNF81P51508 661 aa11.29□□□□□ -0.6
VRK3-205ENST00000593919 GPM6AP51674 278 aa11.29□□□□□ -0.6
VRK3-205ENST00000593919 NKPD1Q17RQ9 610 aa11.29□□□□□ -0.6
VRK3-205ENST00000593919 LGALSLQ3ZCW2 172 aaPredicted RBP11.29□□□□□ -0.6
VRK3-205ENST00000593919 SLC22A6Q4U2R8 563 aa11.29□□□□□ -0.6
VRK3-205ENST00000593919 TMEM108Q6UXF1 575 aa11.29□□□□□ -0.6
VRK3-205ENST00000593919 ZNF767PQ75MW2 155 aa11.29□□□□□ -0.6
VRK3-205ENST00000593919 SSX8Q7RTT4 187 aa11.29□□□□□ -0.6
VRK3-205ENST00000593919 TMED4Q7Z7H5 227 aa11.29□□□□□ -0.6
VRK3-205ENST00000593919 C1orf174Q8IYL3 243 aa11.29□□□□□ -0.6
VRK3-205ENST00000593919 MUC20Q8N307 709 aaPredicted RBP11.29□□□□□ -0.6
VRK3-205ENST00000593919 TMEM104Q8NE00 496 aa11.29□□□□□ -0.6
VRK3-205ENST00000593919 RNASE6Q93091 150 aaKnown RBP11.29□□□□□ -0.6
VRK3-205ENST00000593919 BBC3Q96PG8 261 aaPredicted RBP11.29□□□□□ -0.6
VRK3-205ENST00000593919 IFT46Q9NQC8 304 aa11.29□□□□□ -0.6
VRK3-205ENST00000593919 TUBG2Q9NRH3 451 aa11.29□□□□□ -0.6
VRK3-205ENST00000593919 PIPOXQ9P0Z9 390 aa11.29□□□□□ -0.6
VRK3-205ENST00000593919 MPC1Q9Y5U8 109 aa11.29□□□□□ -0.6
VRK3-205ENST00000593919 ABCA4P78363 2273 aa11.29□□□□□ -0.6
VRK3-205ENST00000593919 A0A0A6YYD4 124 aa11.28□□□□□ -0.6
VRK3-205ENST00000593919 A0A1W2PP11 408 aa11.28□□□□□ -0.6
VRK3-205ENST00000593919 TMEM82A0PJX8 343 aa11.28□□□□□ -0.6
VRK3-205ENST00000593919 SPRY1O43609 319 aaPredicted RBP11.28□□□□□ -0.6
VRK3-205ENST00000593919 CDC14BO60729 498 aa11.28□□□□□ -0.6
VRK3-205ENST00000593919 CD74P04233 296 aa11.28□□□□□ -0.6
VRK3-205ENST00000593919 GIPP09681 153 aaPredicted RBP11.28□□□□□ -0.6
VRK3-205ENST00000593919 ZNF735P0CB33 412 aa11.28□□□□□ -0.6
VRK3-205ENST00000593919 UBBP0CG47 229 aa11.28□□□□□ -0.6
VRK3-205ENST00000593919 PPP3CBP16298 524 aa11.28□□□□□ -0.6
VRK3-205ENST00000593919 SELEP16581 610 aa11.28□□□□□ -0.6
VRK3-205ENST00000593919 FABP6P51161 128 aa11.28□□□□□ -0.6
VRK3-205ENST00000593919 ATP1B3P54709 279 aa11.28□□□□□ -0.6
VRK3-205ENST00000593919 NKX6-1P78426 367 aaPredicted RBP11.28□□□□□ -0.6
VRK3-205ENST00000593919 SNTB1Q13884 538 aaKnown RBP11.28□□□□□ -0.6
VRK3-205ENST00000593919 C2orf68Q2NKX9 166 aa11.28□□□□□ -0.6
VRK3-205ENST00000593919 ZNF718Q3SXZ3 478 aa11.28□□□□□ -0.6
VRK3-205ENST00000593919 OR52W1Q6IF63 320 aa11.28□□□□□ -0.6
VRK3-205ENST00000593919 SLC6A7Q99884 636 aa11.28□□□□□ -0.6
VRK3-205ENST00000593919 LPAR5Q9H1C0 372 aa11.28□□□□□ -0.6
VRK3-205ENST00000593919 FBLN5Q9UBX5 448 aa11.28□□□□□ -0.6
VRK3-205ENST00000593919 PURGQ9UJV8 347 aaKnown RBP11.28□□□□□ -0.6
VRK3-205ENST00000593919 SPEF1Q9Y4P9 236 aa11.28□□□□□ -0.6
VRK3-205ENST00000593919 CHD3Q12873 2000 aaKnown RBP11.28□□□□□ -0.6
VRK3-205ENST00000593919 MYO18BQ8IUG5 2567 aa11.28□□□□□ -0.6
VRK3-205ENST00000593919 PQLC2LA1A4F0 135 aa11.28□□□□□ -0.6
VRK3-205ENST00000593919 DISC1C4P0D8 188 aa11.28□□□□□ -0.6
VRK3-205ENST00000593919 GOSR2O14653 212 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms