RNA–Protein interactions for RNA: ENST00000592535.5

APOC1-208, Transcript of apolipoprotein C1, humanhuman

TSL 1 (best)

Gene APOC1, Length 430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-208ENST00000592535 ATF1P18846 271 aa11.33□□□□□ -0.6
APOC1-208ENST00000592535 AZGP1P25311 298 aaKnown RBP11.33□□□□□ -0.6
APOC1-208ENST00000592535 CCR9P51686 369 aa11.33□□□□□ -0.6
APOC1-208ENST00000592535 ATP1B3P54709 279 aa11.33□□□□□ -0.6
APOC1-208ENST00000592535 ERVFRD-1P60508 538 aa11.33□□□□□ -0.6
APOC1-208ENST00000592535 ACTA2P62736 377 aa11.33□□□□□ -0.6
APOC1-208ENST00000592535 ACTG2P63267 376 aa11.33□□□□□ -0.6
APOC1-208ENST00000592535 ACSM1Q08AH1 577 aa11.33□□□□□ -0.6
APOC1-208ENST00000592535 ZNF273Q14593 569 aa11.33□□□□□ -0.6
APOC1-208ENST00000592535 UTS2BQ765I0 119 aa11.33□□□□□ -0.6
APOC1-208ENST00000592535 EGFL6Q8IUX8 553 aa11.33□□□□□ -0.6
APOC1-208ENST00000592535 C11orf42Q8N5U0 333 aa11.33□□□□□ -0.6
APOC1-208ENST00000592535 ASCC1Q8N9N2 400 aaKnown RBP11.33□□□□□ -0.6
APOC1-208ENST00000592535 DNAAF1Q8NEP3 725 aa11.33□□□□□ -0.6
APOC1-208ENST00000592535 OR51A4Q8NGJ6 313 aa11.33□□□□□ -0.6
APOC1-208ENST00000592535 RHOXF1Q8NHV9 184 aa11.33□□□□□ -0.6
APOC1-208ENST00000592535 C17orf50Q8WW18 174 aa11.33□□□□□ -0.6
APOC1-208ENST00000592535 APH1BQ8WW43 257 aa11.33□□□□□ -0.6
APOC1-208ENST00000592535 ALG8Q9BVK2 526 aa11.33□□□□□ -0.6
APOC1-208ENST00000592535 FAM234AQ9H0X4 552 aa11.33□□□□□ -0.6
APOC1-208ENST00000592535 SLITRK2Q9H156 845 aa11.33□□□□□ -0.6
APOC1-208ENST00000592535 ISG20L2Q9H9L3 353 aaKnown RBP11.33□□□□□ -0.6
APOC1-208ENST00000592535 BEX1Q9HBH7 125 aa11.33□□□□□ -0.6
APOC1-208ENST00000592535 FAM118AQ9NWS6 357 aa11.33□□□□□ -0.6
APOC1-208ENST00000592535 HHLA2Q9UM44 414 aa11.33□□□□□ -0.6
APOC1-208ENST00000592535 SF3B6Q9Y3B4 125 aaKnown RBP11.33□□□□□ -0.6
APOC1-208ENST00000592535 NBEAL1Q6ZS30 2694 aa11.32□□□□□ -0.6
APOC1-208ENST00000592535 A0A1B0GUS0 222 aa11.32□□□□□ -0.6
APOC1-208ENST00000592535 OR4C45A6NMZ5 311 aa11.32□□□□□ -0.6
APOC1-208ENST00000592535 K7N7A8 449 aa11.32□□□□□ -0.6
APOC1-208ENST00000592535 ZNF737O75373 536 aa11.32□□□□□ -0.6
APOC1-208ENST00000592535 PAHP00439 452 aa11.32□□□□□ -0.6
APOC1-208ENST00000592535 IGHA1P01876 353 aa11.32□□□□□ -0.6
APOC1-208ENST00000592535 CHRM2P08172 466 aa11.32□□□□□ -0.6
APOC1-208ENST00000592535 POU3F4P49335 361 aa11.32□□□□□ -0.6
APOC1-208ENST00000592535 RBP2P50120 134 aa11.32□□□□□ -0.6
APOC1-208ENST00000592535 RPL15P61313 204 aaKnown RBP11.32□□□□□ -0.6
APOC1-208ENST00000592535 ALKBH1Q13686 389 aaKnown RBP11.32□□□□□ -0.6
APOC1-208ENST00000592535 GALEQ14376 348 aa11.32□□□□□ -0.6
APOC1-208ENST00000592535 OLFML2AQ68BL7 652 aa11.32□□□□□ -0.6
APOC1-208ENST00000592535 SYS1Q8N2H4 156 aa11.32□□□□□ -0.6
APOC1-208ENST00000592535 OR52I1Q8NGK6 324 aa11.32□□□□□ -0.6
APOC1-208ENST00000592535 OR13C3Q8NGS6 347 aa11.32□□□□□ -0.6
APOC1-208ENST00000592535 EMG1Q92979 244 aaKnown RBP11.32□□□□□ -0.6
APOC1-208ENST00000592535 MRPL48Q96GC5 212 aaKnown RBP11.32□□□□□ -0.6
APOC1-208ENST00000592535 Q96MT0 163 aa11.32□□□□□ -0.6
APOC1-208ENST00000592535 ZNF649Q9BS31 505 aa11.32□□□□□ -0.6
APOC1-208ENST00000592535 DCLRE1BQ9H816 532 aa11.32□□□□□ -0.6
APOC1-208ENST00000592535 IL36RNQ9UBH0 155 aa11.32□□□□□ -0.6
APOC1-208ENST00000592535 A0A1W2PPH5 198 aa11.31□□□□□ -0.6
APOC1-208ENST00000592535 TMEM82A0PJX8 343 aa11.31□□□□□ -0.6
APOC1-208ENST00000592535 MEX3AA1L020 520 aaKnown RBP11.31□□□□□ -0.6
APOC1-208ENST00000592535 CLPSL1A2RUU4 121 aa11.31□□□□□ -0.6
APOC1-208ENST00000592535 BTBD17A6NE02 478 aa11.31□□□□□ -0.6
APOC1-208ENST00000592535 FADS2O95864 444 aaKnown RBP11.31□□□□□ -0.6
APOC1-208ENST00000592535 CALCBP10092 127 aa11.31□□□□□ -0.6
APOC1-208ENST00000592535 BCL3P20749 454 aa11.31□□□□□ -0.6
APOC1-208ENST00000592535 PRKACBP22694 351 aa11.31□□□□□ -0.6
APOC1-208ENST00000592535 NPBWR2P48146 333 aa11.31□□□□□ -0.6
APOC1-208ENST00000592535 MTCP1P56278 107 aa11.31□□□□□ -0.6
APOC1-208ENST00000592535 SRSF4Q08170 494 aaKnown RBP11.31□□□□□ -0.6
APOC1-208ENST00000592535 RAB40BQ12829 278 aa11.31□□□□□ -0.6
APOC1-208ENST00000592535 MIDNQ504T8 468 aa11.31□□□□□ -0.6
APOC1-208ENST00000592535 PRR31Q5SQ13 230 aa11.31□□□□□ -0.6
APOC1-208ENST00000592535 GDPGP1Q6ZNW5 385 aa11.31□□□□□ -0.6
APOC1-208ENST00000592535 LHFPL2Q6ZUX7 228 aa11.31□□□□□ -0.6
APOC1-208ENST00000592535 RNF144BQ7Z419 303 aa11.31□□□□□ -0.6
APOC1-208ENST00000592535 ZNF676Q8N7Q3 588 aa11.31□□□□□ -0.6
APOC1-208ENST00000592535 OR13C9Q8NGT0 318 aa11.31□□□□□ -0.6
APOC1-208ENST00000592535 WFDC12Q8WWY7 111 aa11.31□□□□□ -0.6
APOC1-208ENST00000592535 RFT1Q96AA3 541 aa11.31□□□□□ -0.6
APOC1-208ENST00000592535 AJUBAQ96IF1 538 aa11.31□□□□□ -0.6
APOC1-208ENST00000592535 OPALINQ96PE5 141 aa11.31□□□□□ -0.6
APOC1-208ENST00000592535 RBFOX1Q9NWB1 397 aaKnown RBP11.31□□□□□ -0.6
APOC1-208ENST00000592535 ERVK13-1Q9NX77 482 aa11.31□□□□□ -0.6
APOC1-208ENST00000592535 SMPD3Q9NY59 655 aaPredicted RBP11.31□□□□□ -0.6
APOC1-208ENST00000592535 VPREB3Q9UKI3 123 aa11.31□□□□□ -0.6
APOC1-208ENST00000592535 E9PI62 339 aa11.3□□□□□ -0.6
APOC1-208ENST00000592535 HAND1O96004 215 aa11.3□□□□□ -0.6
APOC1-208ENST00000592535 COX7A1P24310 79 aa11.3□□□□□ -0.6
APOC1-208ENST00000592535 PAX6P26367 422 aa11.3□□□□□ -0.6
APOC1-208ENST00000592535 DUSP1P28562 367 aa11.3□□□□□ -0.6
APOC1-208ENST00000592535 BMXP51813 675 aa11.3□□□□□ -0.6
APOC1-208ENST00000592535 SNU13P55769 128 aaKnown RBP11.3□□□□□ -0.6
APOC1-208ENST00000592535 DLX6P56179 175 aa11.3□□□□□ -0.6
APOC1-208ENST00000592535 EDDM3BP56851 147 aa11.3□□□□□ -0.6
APOC1-208ENST00000592535 ZNF782Q6ZMW2 699 aaPredicted RBP11.3□□□□□ -0.6
APOC1-208ENST00000592535 C17orf107Q6ZR85 190 aa11.3□□□□□ -0.6
APOC1-208ENST00000592535 Q6ZSV7 163 aa11.3□□□□□ -0.6
APOC1-208ENST00000592535 GDPD3Q7L5L3 318 aa11.3□□□□□ -0.6
APOC1-208ENST00000592535 Q8IYB0 196 aa11.3□□□□□ -0.6
APOC1-208ENST00000592535 OR8H2Q8N162 312 aa11.3□□□□□ -0.6
APOC1-208ENST00000592535 BEND2Q8NDZ0 799 aa11.3□□□□□ -0.6
APOC1-208ENST00000592535 LINC01006Q8NI28 216 aa11.3□□□□□ -0.6
APOC1-208ENST00000592535 STMN2Q93045 179 aa11.3□□□□□ -0.6
APOC1-208ENST00000592535 SPSB1Q96BD6 273 aa11.3□□□□□ -0.6
APOC1-208ENST00000592535 SNX22Q96L94 193 aa11.3□□□□□ -0.6
APOC1-208ENST00000592535 SPACA5Q96QH8 159 aa11.3□□□□□ -0.6
APOC1-208ENST00000592535 ZNF696Q9H7X3 374 aa11.3□□□□□ -0.6
APOC1-208ENST00000592535 HEXA-AS1Q9H8Q6 139 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms