RNA–Protein interactions for RNA: ENST00000591519.1

VPS4B-207, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

TSL 2 BASIC

Gene VPS4B, Length 551 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-207ENST00000591519 SLC16A6O15403 523 aa8.47□□□□□ -1.05
VPS4B-207ENST00000591519 MPZL2O60487 215 aa8.47□□□□□ -1.05
VPS4B-207ENST00000591519 NOS1APO75052 506 aaPredicted RBP8.47□□□□□ -1.05
VPS4B-207ENST00000591519 IGLV1-40P01703 118 aa8.47□□□□□ -1.05
VPS4B-207ENST00000591519 TFF1P04155 84 aa8.47□□□□□ -1.05
VPS4B-207ENST00000591519 DBTP11182 482 aaKnown RBP8.47□□□□□ -1.05
VPS4B-207ENST00000591519 GABRA2P47869 451 aa8.47□□□□□ -1.05
VPS4B-207ENST00000591519 SLC34A1Q06495 639 aa8.47□□□□□ -1.05
VPS4B-207ENST00000591519 EGR3Q06889 387 aa8.47□□□□□ -1.05
VPS4B-207ENST00000591519 RIPPLY1Q0D2K3 151 aa8.47□□□□□ -1.05
VPS4B-207ENST00000591519 TMED1Q13445 227 aa8.47□□□□□ -1.05
VPS4B-207ENST00000591519 CRIP3Q6Q6R5 217 aa8.47□□□□□ -1.05
VPS4B-207ENST00000591519 Q6ZSR3 168 aa8.47□□□□□ -1.05
VPS4B-207ENST00000591519 FAM220AQ7Z4H9 259 aa8.47□□□□□ -1.05
VPS4B-207ENST00000591519 LHFPL3Q86UP9 236 aa8.47□□□□□ -1.05
VPS4B-207ENST00000591519 PNKDQ8N490 385 aa8.47□□□□□ -1.05
VPS4B-207ENST00000591519 PACRGLQ8N7B6 248 aa8.47□□□□□ -1.05
VPS4B-207ENST00000591519 APH1BQ8WW43 257 aa8.47□□□□□ -1.05
VPS4B-207ENST00000591519 NRG4Q8WWG1 115 aa8.47□□□□□ -1.05
VPS4B-207ENST00000591519 RDH12Q96NR8 316 aa8.47□□□□□ -1.05
VPS4B-207ENST00000591519 GPR84Q9NQS5 396 aa8.47□□□□□ -1.05
VPS4B-207ENST00000591519 CMYA5Q8N3K9 4069 aa8.47□□□□□ -1.05
VPS4B-207ENST00000591519 ANKRD61A6NGH8 418 aa8.46□□□□□ -1.06
VPS4B-207ENST00000591519 A6NIN4 97 aa8.46□□□□□ -1.06
VPS4B-207ENST00000591519 H0YAE9 185 aa8.46□□□□□ -1.06
VPS4B-207ENST00000591519 J3QLW9 94 aa8.46□□□□□ -1.06
VPS4B-207ENST00000591519 SRSF10O75494 262 aaKnown RBP8.46□□□□□ -1.06
VPS4B-207ENST00000591519 WBP4O75554 376 aaKnown RBP8.46□□□□□ -1.06
VPS4B-207ENST00000591519 TSPAN15O95858 294 aa8.46□□□□□ -1.06
VPS4B-207ENST00000591519 TTRP02766 147 aa8.46□□□□□ -1.06
VPS4B-207ENST00000591519 GNAO1P09471 354 aa8.46□□□□□ -1.06
VPS4B-207ENST00000591519 FAHP16930 419 aa8.46□□□□□ -1.06
VPS4B-207ENST00000591519 ZNF19P17023 458 aa8.46□□□□□ -1.06
VPS4B-207ENST00000591519 EFNB2P52799 333 aa8.46□□□□□ -1.06
VPS4B-207ENST00000591519 OR12D2P58182 307 aa8.46□□□□□ -1.06
VPS4B-207ENST00000591519 C2orf68Q2NKX9 166 aa8.46□□□□□ -1.06
VPS4B-207ENST00000591519 CEP78Q5JTW2 689 aa8.46□□□□□ -1.06
VPS4B-207ENST00000591519 SLC25A30Q5SVS4 291 aa8.46□□□□□ -1.06
VPS4B-207ENST00000591519 ZNF691Q5VV52 312 aa8.46□□□□□ -1.06
VPS4B-207ENST00000591519 TTC23Q5W5X9 447 aa8.46□□□□□ -1.06
VPS4B-207ENST00000591519 TMEM42Q69YG0 159 aa8.46□□□□□ -1.06
VPS4B-207ENST00000591519 TMEM200BQ69YZ2 307 aa8.46□□□□□ -1.06
VPS4B-207ENST00000591519 ACP7Q6ZNF0 438 aa8.46□□□□□ -1.06
VPS4B-207ENST00000591519 THAP5Q7Z6K1 395 aa8.46□□□□□ -1.06
VPS4B-207ENST00000591519 CALHM1Q8IU99 346 aa8.46□□□□□ -1.06
VPS4B-207ENST00000591519 ZNF561Q8N587 486 aa8.46□□□□□ -1.06
VPS4B-207ENST00000591519 DTX3Q8N9I9 347 aa8.46□□□□□ -1.06
VPS4B-207ENST00000591519 POC1AQ8NBT0 407 aa8.46□□□□□ -1.06
VPS4B-207ENST00000591519 OR52I1Q8NGK6 324 aa8.46□□□□□ -1.06
VPS4B-207ENST00000591519 PPP1R35Q8TAP8 253 aa8.46□□□□□ -1.06
VPS4B-207ENST00000591519 C17orf50Q8WW18 174 aa8.46□□□□□ -1.06
VPS4B-207ENST00000591519 CFHR4Q92496 578 aa8.46□□□□□ -1.06
VPS4B-207ENST00000591519 Q96MT0 163 aa8.46□□□□□ -1.06
VPS4B-207ENST00000591519 SSX3Q99909 188 aa8.46□□□□□ -1.06
VPS4B-207ENST00000591519 ADI1Q9BV57 179 aa8.46□□□□□ -1.06
VPS4B-207ENST00000591519 PPA2Q9H2U2 334 aa8.46□□□□□ -1.06
VPS4B-207ENST00000591519 VCXQ9H320 206 aa8.46□□□□□ -1.06
VPS4B-207ENST00000591519 NUFIP1Q9UHK0 495 aaKnown RBP8.46□□□□□ -1.06
VPS4B-207ENST00000591519 MYRFQ9Y2G1 1151 aa8.46□□□□□ -1.06
VPS4B-207ENST00000591519 SNX5Q9Y5X3 404 aa8.46□□□□□ -1.06
VPS4B-207ENST00000591519 FAM90A8PA6NJQ4 464 aa8.45□□□□□ -1.06
VPS4B-207ENST00000591519 RFPL4AA6NLU0 287 aa8.45□□□□□ -1.06
VPS4B-207ENST00000591519 RFPL4AL1F8VTS6 287 aa8.45□□□□□ -1.06
VPS4B-207ENST00000591519 H3BUX3 64 aa8.45□□□□□ -1.06
VPS4B-207ENST00000591519 DHRS3O75911 302 aa8.45□□□□□ -1.06
VPS4B-207ENST00000591519 NRASP01111 189 aa8.45□□□□□ -1.06
VPS4B-207ENST00000591519 GABRA5P31644 462 aa8.45□□□□□ -1.06
VPS4B-207ENST00000591519 PRDX2P32119 198 aa8.45□□□□□ -1.06
VPS4B-207ENST00000591519 CAPGP40121 348 aa8.45□□□□□ -1.06
VPS4B-207ENST00000591519 AQP4P55087 323 aa8.45□□□□□ -1.06
VPS4B-207ENST00000591519 ACTC1P68032 377 aa8.45□□□□□ -1.06
VPS4B-207ENST00000591519 ACTA1P68133 377 aa8.45□□□□□ -1.06
VPS4B-207ENST00000591519 ADARB1P78563 741 aaKnown RBP8.45□□□□□ -1.06
VPS4B-207ENST00000591519 HERPUD1Q15011 391 aa8.45□□□□□ -1.06
VPS4B-207ENST00000591519 HAGHLQ6PII5 290 aaPredicted RBP8.45□□□□□ -1.06
VPS4B-207ENST00000591519 MOB3CQ70IA8 216 aa8.45□□□□□ -1.06
VPS4B-207ENST00000591519 CATSPERDQ86XM0 798 aa8.45□□□□□ -1.06
VPS4B-207ENST00000591519 MKXQ8IYA7 352 aa8.45□□□□□ -1.06
VPS4B-207ENST00000591519 ACBD7Q8N6N7 88 aa8.45□□□□□ -1.06
VPS4B-207ENST00000591519 CD177Q8N6Q3 437 aa8.45□□□□□ -1.06
VPS4B-207ENST00000591519 PIFOQ8TCI5 191 aa8.45□□□□□ -1.06
VPS4B-207ENST00000591519 RORBQ92753 470 aa8.45□□□□□ -1.06
VPS4B-207ENST00000591519 C4orf36Q96KX1 117 aa8.45□□□□□ -1.06
VPS4B-207ENST00000591519 ALG8Q9BVK2 526 aa8.45□□□□□ -1.06
VPS4B-207ENST00000591519 RANBP3Q9H6Z4 567 aaPredicted RBP8.45□□□□□ -1.06
VPS4B-207ENST00000591519 HEXA-AS1Q9H8Q6 139 aa8.45□□□□□ -1.06
VPS4B-207ENST00000591519 ELL3Q9HB65 397 aaPredicted RBP8.45□□□□□ -1.06
VPS4B-207ENST00000591519 C8orf4Q9NR00 106 aa8.45□□□□□ -1.06
VPS4B-207ENST00000591519 C19orf12Q9NSK7 152 aa8.45□□□□□ -1.06
VPS4B-207ENST00000591519 ENPP5Q9UJA9 477 aa8.45□□□□□ -1.06
VPS4B-207ENST00000591519 PIGLQ9Y2B2 252 aa8.45□□□□□ -1.06
VPS4B-207ENST00000591519 EXOGQ9Y2C4 368 aaKnown RBP8.45□□□□□ -1.06
VPS4B-207ENST00000591519 RPL36Q9Y3U8 105 aaKnown RBP8.45□□□□□ -1.06
VPS4B-207ENST00000591519 hCG_1809904A0A1W2PP81 198 aa8.44□□□□□ -1.06
VPS4B-207ENST00000591519 A0A1W2PPE2 198 aa8.44□□□□□ -1.06
VPS4B-207ENST00000591519 A0A1W2PPH5 198 aa8.44□□□□□ -1.06
VPS4B-207ENST00000591519 A0A1W2PR64 198 aa8.44□□□□□ -1.06
VPS4B-207ENST00000591519 A0A1W2PRV1 198 aa8.44□□□□□ -1.06
VPS4B-207ENST00000591519 PQLC2LA1A4F0 135 aa8.44□□□□□ -1.06
VPS4B-207ENST00000591519 MEGF11A6BM72 1044 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms