RNA–Protein interactions for RNA: ENST00000590556.1

DDX39A-214, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 575 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-214ENST00000590556 TLN2Q9Y4G6 2542 aa15.96■□□□□ 0.15
DDX39A-214ENST00000590556 IGKV1D-17A0A075B6S4 117 aa15.96■□□□□ 0.15
DDX39A-214ENST00000590556 NKX6-3A6NJ46 265 aa15.96■□□□□ 0.15
DDX39A-214ENST00000590556 RFPL4AA6NLU0 287 aa15.96■□□□□ 0.15
DDX39A-214ENST00000590556 B4DSR2 109 aa15.96■□□□□ 0.15
DDX39A-214ENST00000590556 RFPL4AL1F8VTS6 287 aa15.96■□□□□ 0.15
DDX39A-214ENST00000590556 TMPRSS2O15393 492 aa15.96■□□□□ 0.15
DDX39A-214ENST00000590556 CDRT1O95170 752 aa15.96■□□□□ 0.15
DDX39A-214ENST00000590556 KNG1P01042 644 aa15.96■□□□□ 0.15
DDX39A-214ENST00000590556 CALCBP10092 127 aa15.96■□□□□ 0.15
DDX39A-214ENST00000590556 PRKACAP17612 351 aa15.96■□□□□ 0.15
DDX39A-214ENST00000590556 GADD45AP24522 165 aa15.96■□□□□ 0.15
DDX39A-214ENST00000590556 FGF9P31371 208 aaPredicted RBP15.96■□□□□ 0.15
DDX39A-214ENST00000590556 PITPNBP48739 271 aa15.96■□□□□ 0.15
DDX39A-214ENST00000590556 RSU1Q15404 277 aa15.96■□□□□ 0.15
DDX39A-214ENST00000590556 ESCO2Q56NI9 601 aa15.96■□□□□ 0.15
DDX39A-214ENST00000590556 ASCL4Q6XD76 172 aa15.96■□□□□ 0.15
DDX39A-214ENST00000590556 SLC36A1Q7Z2H8 476 aa15.96■□□□□ 0.15
DDX39A-214ENST00000590556 BIVMQ86UB2 503 aa15.96■□□□□ 0.15
DDX39A-214ENST00000590556 FOXRED1Q96CU9 486 aaPredicted RBP15.96■□□□□ 0.15
DDX39A-214ENST00000590556 MSI2Q96DH6 328 aaKnown RBP15.96■□□□□ 0.15
DDX39A-214ENST00000590556 YIPF6Q96EC8 236 aa15.96■□□□□ 0.15
DDX39A-214ENST00000590556 SMR3AQ99954 134 aa15.96■□□□□ 0.15
DDX39A-214ENST00000590556 CHCHD6Q9BRQ6 235 aa15.96■□□□□ 0.15
DDX39A-214ENST00000590556 UQCC2Q9BRT2 126 aa15.96■□□□□ 0.15
DDX39A-214ENST00000590556 METTL9Q9H1A3 318 aa15.96■□□□□ 0.15
DDX39A-214ENST00000590556 CNTD2Q9H8S5 307 aa15.96■□□□□ 0.15
DDX39A-214ENST00000590556 LPAR2Q9HBW0 351 aa15.96■□□□□ 0.15
DDX39A-214ENST00000590556 HMG20AQ9NP66 347 aa15.96■□□□□ 0.15
DDX39A-214ENST00000590556 KAAG1Q9UBP8 84 aa15.96■□□□□ 0.15
DDX39A-214ENST00000590556 OR14J1Q9UGF5 321 aa15.96■□□□□ 0.15
DDX39A-214ENST00000590556 GSTK1Q9Y2Q3 226 aa15.96■□□□□ 0.15
DDX39A-214ENST00000590556 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP15.95■□□□□ 0.146e-14■■■■■ 70.5
DDX39A-214ENST00000590556 DOCK11Q5JSL3 2073 aa15.95■□□□□ 0.14
DDX39A-214ENST00000590556 TRAV1-2A0A0B4J238 106 aa15.95■□□□□ 0.14
DDX39A-214ENST00000590556 TFF1P04155 84 aa15.95■□□□□ 0.14
DDX39A-214ENST00000590556 SFTPBP07988 381 aa15.95■□□□□ 0.14
DDX39A-214ENST00000590556 AMY2BP19961 511 aa15.95■□□□□ 0.14
DDX39A-214ENST00000590556 MYL9P24844 172 aa15.95■□□□□ 0.14
DDX39A-214ENST00000590556 PRDX2P32119 198 aa15.95■□□□□ 0.14
DDX39A-214ENST00000590556 SEC61A1P61619 476 aaKnown RBP15.95■□□□□ 0.14
DDX39A-214ENST00000590556 GNB2P62879 340 aa15.95■□□□□ 0.14
DDX39A-214ENST00000590556 LYPD6Q86Y78 171 aa15.95■□□□□ 0.14
DDX39A-214ENST00000590556 MED30Q96HR3 178 aa15.95■□□□□ 0.14
DDX39A-214ENST00000590556 CTSZQ9UBR2 303 aa15.95■□□□□ 0.14
DDX39A-214ENST00000590556 CLN8Q9UBY8 286 aa15.95■□□□□ 0.14
DDX39A-214ENST00000590556 ZNF222Q9UK12 451 aa15.95■□□□□ 0.14
DDX39A-214ENST00000590556 MRPS28Q9Y2Q9 187 aaKnown RBP15.95■□□□□ 0.14
DDX39A-214ENST00000590556 AK6Q9Y3D8 172 aaKnown RBP15.95■□□□□ 0.14
DDX39A-214ENST00000590556 MALRD1Q5VYJ5 2156 aa15.94■□□□□ 0.14
DDX39A-214ENST00000590556 LOC100506127A0A0U1RQW1 187 aa15.94■□□□□ 0.14
DDX39A-214ENST00000590556 PDCD5O14737 125 aa15.94■□□□□ 0.14
DDX39A-214ENST00000590556 CD5LO43866 347 aa15.94■□□□□ 0.14
DDX39A-214ENST00000590556 FOXH1O75593 365 aa15.94■□□□□ 0.14
DDX39A-214ENST00000590556 LY6G6DO95868 133 aa15.94■□□□□ 0.14
DDX39A-214ENST00000590556 TGFAP01135 160 aa15.94■□□□□ 0.14
DDX39A-214ENST00000590556 MTNR1BP49286 362 aa15.94■□□□□ 0.14
DDX39A-214ENST00000590556 CEBPDP49716 269 aaPredicted RBP15.94■□□□□ 0.14
DDX39A-214ENST00000590556 BMXP51813 675 aa15.94■□□□□ 0.14
DDX39A-214ENST00000590556 SNU13P55769 128 aaKnown RBP15.94■□□□□ 0.14
DDX39A-214ENST00000590556 IL13RA1P78552 427 aa15.94■□□□□ 0.14
DDX39A-214ENST00000590556 LCN2P80188 198 aa15.94■□□□□ 0.14
DDX39A-214ENST00000590556 KRTAP1-1Q07627 177 aa15.94■□□□□ 0.14
DDX39A-214ENST00000590556 TIMM50Q3ZCQ8 353 aa15.94■□□□□ 0.14
DDX39A-214ENST00000590556 CLEC9AQ6UXN8 241 aa15.94■□□□□ 0.14
DDX39A-214ENST00000590556 ZNF841Q6ZN19 808 aa15.94■□□□□ 0.14
DDX39A-214ENST00000590556 ZNF788Q6ZQV5 615 aa15.94■□□□□ 0.14
DDX39A-214ENST00000590556 CD177Q8N6Q3 437 aa15.94■□□□□ 0.14
DDX39A-214ENST00000590556 FAM216BQ8N7L0 139 aa15.94■□□□□ 0.14
DDX39A-214ENST00000590556 OR4D6Q8NGJ1 314 aa15.94■□□□□ 0.14
DDX39A-214ENST00000590556 OR10K1Q8NGX5 313 aa15.94■□□□□ 0.14
DDX39A-214ENST00000590556 GAFA1Q96PS6 74 aa15.94■□□□□ 0.14
DDX39A-214ENST00000590556 SSBP3Q9BWW4 388 aaPredicted RBP15.94■□□□□ 0.14
DDX39A-214ENST00000590556 IL36GQ9NZH8 169 aa15.94■□□□□ 0.14
DDX39A-214ENST00000590556 A0A1B0GW55 424 aa15.93■□□□□ 0.14
DDX39A-214ENST00000590556 DVL1O14640 695 aa15.93■□□□□ 0.14
DDX39A-214ENST00000590556 SIGLEC5O15389 551 aa15.93■□□□□ 0.14
DDX39A-214ENST00000590556 PHF1O43189 567 aaPredicted RBP15.93■□□□□ 0.14
DDX39A-214ENST00000590556 NDUFB3O43676 98 aa15.93■□□□□ 0.14
DDX39A-214ENST00000590556 HTR3BO95264 441 aa15.93■□□□□ 0.14
DDX39A-214ENST00000590556 MSMBP08118 114 aa15.93■□□□□ 0.14
DDX39A-214ENST00000590556 DUX4L2P0CJ85 424 aa15.93■□□□□ 0.14
DDX39A-214ENST00000590556 DUX4L3P0CJ86 424 aa15.93■□□□□ 0.14
DDX39A-214ENST00000590556 DUX4L4P0CJ87 422 aa15.93■□□□□ 0.14
DDX39A-214ENST00000590556 DUX4L5P0CJ88 424 aa15.93■□□□□ 0.14
DDX39A-214ENST00000590556 DUX4L6P0CJ89 424 aa15.93■□□□□ 0.14
DDX39A-214ENST00000590556 DUX4L7P0CJ90 424 aa15.93■□□□□ 0.14
DDX39A-214ENST00000590556 ZNF16P17020 682 aaPredicted RBP15.93■□□□□ 0.14
DDX39A-214ENST00000590556 ZFP36P26651 326 aaKnown RBP15.93■□□□□ 0.14
DDX39A-214ENST00000590556 NPY4RP50391 375 aa15.93■□□□□ 0.14
DDX39A-214ENST00000590556 PSMD7P51665 324 aa15.93■□□□□ 0.14
DDX39A-214ENST00000590556 IKZF1Q13422 519 aa15.93■□□□□ 0.14
DDX39A-214ENST00000590556 SPIN3Q5JUX0 258 aa15.93■□□□□ 0.14
DDX39A-214ENST00000590556 C1orf100Q5SVJ3 147 aa15.93■□□□□ 0.14
DDX39A-214ENST00000590556 WDR25Q64LD2 544 aaPredicted RBP15.93■□□□□ 0.14
DDX39A-214ENST00000590556 AWAT2Q6E213 333 aa15.93■□□□□ 0.14
DDX39A-214ENST00000590556 ELP2Q6IA86 826 aa15.93■□□□□ 0.14
DDX39A-214ENST00000590556 DUX4L9Q6RFH8 374 aaPredicted RBP15.93■□□□□ 0.14
DDX39A-214ENST00000590556 GLIPR1L1Q6UWM5 242 aa15.93■□□□□ 0.14
DDX39A-214ENST00000590556 OR13F1Q8NGS4 319 aa15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms