RNA–Protein interactions for RNA: ENST00000589577.1

VPS25-204, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 5

Gene VPS25, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-204ENST00000589577 PAX6P26367 422 aa4.92□□□□□ -1.62
VPS25-204ENST00000589577 MAPK3P27361 379 aaPredicted RBP4.92□□□□□ -1.62
VPS25-204ENST00000589577 CHATP28329 748 aa4.92□□□□□ -1.62
VPS25-204ENST00000589577 C21orf33P30042 268 aaPredicted RBP4.92□□□□□ -1.62
VPS25-204ENST00000589577 OPRL1P41146 370 aa4.92□□□□□ -1.62
VPS25-204ENST00000589577 RANBP1P43487 201 aa4.92□□□□□ -1.62
VPS25-204ENST00000589577 TGM4P49221 684 aa4.92□□□□□ -1.62
VPS25-204ENST00000589577 NPY4RP50391 375 aa4.92□□□□□ -1.62
VPS25-204ENST00000589577 ETV1P50549 477 aa4.92□□□□□ -1.62
VPS25-204ENST00000589577 ZNF121P58317 390 aaPredicted RBP4.92□□□□□ -1.62
VPS25-204ENST00000589577 HIST1H3AP68431 136 aa4.92□□□□□ -1.62
VPS25-204ENST00000589577 TRAM1Q15629 374 aa4.92□□□□□ -1.62
VPS25-204ENST00000589577 NEDD8Q15843 81 aa4.92□□□□□ -1.62
VPS25-204ENST00000589577 ZNF181Q2M3W8 571 aa4.92□□□□□ -1.62
VPS25-204ENST00000589577 GFOD2Q3B7J2 385 aa4.92□□□□□ -1.62
VPS25-204ENST00000589577 CDONQ4KMG0 1287 aa4.92□□□□□ -1.62
VPS25-204ENST00000589577 CCDC92Q53HC0 331 aaPredicted RBP4.92□□□□□ -1.62
VPS25-204ENST00000589577 HIST2H3PS2Q5TEC6 136 aa4.92□□□□□ -1.62
VPS25-204ENST00000589577 TMEM244Q5VVB8 128 aa4.92□□□□□ -1.62
VPS25-204ENST00000589577 OTPQ5XKR4 325 aa4.92□□□□□ -1.62
VPS25-204ENST00000589577 CD276Q5ZPR3 534 aa4.92□□□□□ -1.62
VPS25-204ENST00000589577 RPL22L1Q6P5R6 122 aaKnown RBP4.92□□□□□ -1.62
VPS25-204ENST00000589577 Q6ZS46 218 aa4.92□□□□□ -1.62
VPS25-204ENST00000589577 HIST2H3AQ71DI3 136 aa4.92□□□□□ -1.62
VPS25-204ENST00000589577 FAM57BQ71RH2 274 aa4.92□□□□□ -1.62
VPS25-204ENST00000589577 MOGAT3Q86VF5 341 aa4.92□□□□□ -1.62
VPS25-204ENST00000589577 SBSPONQ8IVN8 264 aa4.92□□□□□ -1.62
VPS25-204ENST00000589577 FGFRL1Q8N441 504 aa4.92□□□□□ -1.62
VPS25-204ENST00000589577 NANOGP1Q8N7R0 232 aa4.92□□□□□ -1.62
VPS25-204ENST00000589577 PNLDC1Q8NA58 520 aaKnown RBP4.92□□□□□ -1.62
VPS25-204ENST00000589577 BEND2Q8NDZ0 799 aa4.92□□□□□ -1.62
VPS25-204ENST00000589577 OR10AD1Q8NGE0 317 aa4.92□□□□□ -1.62
VPS25-204ENST00000589577 OR5AK2Q8NH90 309 aa4.92□□□□□ -1.62
VPS25-204ENST00000589577 NPRL2Q8WTW4 380 aa4.92□□□□□ -1.62
VPS25-204ENST00000589577 TSEN15Q8WW01 171 aaKnown RBP4.92□□□□□ -1.62
VPS25-204ENST00000589577 SPRYD4Q8WW59 207 aaPredicted RBP4.92□□□□□ -1.62
VPS25-204ENST00000589577 ZNRF4Q8WWF5 429 aa4.92□□□□□ -1.62
VPS25-204ENST00000589577 MEGF10Q96KG7 1140 aa4.92□□□□□ -1.62
VPS25-204ENST00000589577 C4orf45Q96LM5 186 aa4.92□□□□□ -1.62
VPS25-204ENST00000589577 PRR25Q96S07 402 aa4.92□□□□□ -1.62
VPS25-204ENST00000589577 SSX3Q99909 188 aa4.92□□□□□ -1.62
VPS25-204ENST00000589577 NPFFR1Q9GZQ6 430 aa4.92□□□□□ -1.62
VPS25-204ENST00000589577 EDA2RQ9HAV5 297 aa4.92□□□□□ -1.62
VPS25-204ENST00000589577 ISYNA1Q9NPH2 558 aa4.92□□□□□ -1.62
VPS25-204ENST00000589577 SIRT7Q9NRC8 400 aa4.92□□□□□ -1.62
VPS25-204ENST00000589577 TBCCD1Q9NVR7 557 aa4.92□□□□□ -1.62
VPS25-204ENST00000589577 FKBP14Q9NWM8 211 aa4.92□□□□□ -1.62
VPS25-204ENST00000589577 BABAM2Q9NXR7 383 aa4.92□□□□□ -1.62
VPS25-204ENST00000589577 ERVK-18Q9QC07 812 aa4.92□□□□□ -1.62
VPS25-204ENST00000589577 CKLFQ9UBR5 152 aa4.92□□□□□ -1.62
VPS25-204ENST00000589577 COPS3Q9UNS2 423 aa4.92□□□□□ -1.62
VPS25-204ENST00000589577 R4GMQ9 66 aa4.92□□□□□ -1.62
VPS25-204ENST00000589577 DNAH10Q8IVF4 4471 aa4.91□□□□□ -1.62
VPS25-204ENST00000589577 MUC4Q99102 2169 aa4.91□□□□□ -1.62
VPS25-204ENST00000589577 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP4.91□□□□□ -1.62
VPS25-204ENST00000589577 GGT3PA6NGU5 568 aa4.91□□□□□ -1.62
VPS25-204ENST00000589577 SYT7O43581 403 aa4.91□□□□□ -1.62
VPS25-204ENST00000589577 JTBO76095 146 aa4.91□□□□□ -1.62
VPS25-204ENST00000589577 SCG5P05408 212 aa4.91□□□□□ -1.62
VPS25-204ENST00000589577 ACSM4P0C7M7 580 aa4.91□□□□□ -1.62
VPS25-204ENST00000589577 LIMS3P0CW19 117 aa4.91□□□□□ -1.62
VPS25-204ENST00000589577 LIMS4P0CW20 117 aa4.91□□□□□ -1.62
VPS25-204ENST00000589577 ZNF20P17024 532 aa4.91□□□□□ -1.62
VPS25-204ENST00000589577 CELP19835 753 aa4.91□□□□□ -1.62
VPS25-204ENST00000589577 GNALP38405 381 aa4.91□□□□□ -1.62
VPS25-204ENST00000589577 DDOSTP39656 456 aa4.91□□□□□ -1.62
VPS25-204ENST00000589577 MAP2K3P46734 347 aa4.91□□□□□ -1.62
VPS25-204ENST00000589577 CCR9P51686 369 aa4.91□□□□□ -1.62
VPS25-204ENST00000589577 HCCSP53701 268 aa4.91□□□□□ -1.62
VPS25-204ENST00000589577 OR12D2P58182 307 aa4.91□□□□□ -1.62
VPS25-204ENST00000589577 DGCR2P98153 550 aa4.91□□□□□ -1.62
VPS25-204ENST00000589577 ZNF85Q03923 595 aa4.91□□□□□ -1.62
VPS25-204ENST00000589577 MZT1Q08AG7 82 aa4.91□□□□□ -1.62
VPS25-204ENST00000589577 MLLT11Q13015 90 aaPredicted RBP4.91□□□□□ -1.62
VPS25-204ENST00000589577 GPR50Q13585 617 aa4.91□□□□□ -1.62
VPS25-204ENST00000589577 ALKBH1Q13686 389 aaKnown RBP4.91□□□□□ -1.62
VPS25-204ENST00000589577 CDK5R1Q15078 307 aa4.91□□□□□ -1.62
VPS25-204ENST00000589577 TMEM95Q3KNT9 176 aa4.91□□□□□ -1.62
VPS25-204ENST00000589577 OR2G6Q5TZ20 316 aa4.91□□□□□ -1.62
VPS25-204ENST00000589577 KCTD8Q6ZWB6 473 aa4.91□□□□□ -1.62
VPS25-204ENST00000589577 PGAP1Q75T13 922 aa4.91□□□□□ -1.62
VPS25-204ENST00000589577 GPR141Q7Z602 305 aa4.91□□□□□ -1.62
VPS25-204ENST00000589577 MRPL41Q8IXM3 137 aaKnown RBP4.91□□□□□ -1.62
VPS25-204ENST00000589577 SPARTQ8N0X7 666 aa4.91□□□□□ -1.62
VPS25-204ENST00000589577 MS4A15Q8N5U1 240 aa4.91□□□□□ -1.62
VPS25-204ENST00000589577 Q8N7P7 452 aa4.91□□□□□ -1.62
VPS25-204ENST00000589577 OR2G2Q8NGZ5 317 aa4.91□□□□□ -1.62
VPS25-204ENST00000589577 PIFOQ8TCI5 191 aa4.91□□□□□ -1.62
VPS25-204ENST00000589577 DPF1Q92782 380 aa4.91□□□□□ -1.62
VPS25-204ENST00000589577 TNFRSF14Q92956 283 aa4.91□□□□□ -1.62
VPS25-204ENST00000589577 RNF166Q96A37 237 aaPredicted RBP4.91□□□□□ -1.62
VPS25-204ENST00000589577 SMIM19Q96E16 107 aa4.91□□□□□ -1.62
VPS25-204ENST00000589577 PELI1Q96FA3 418 aa4.91□□□□□ -1.62
VPS25-204ENST00000589577 CPNE2Q96FN4 548 aaPredicted RBP4.91□□□□□ -1.62
VPS25-204ENST00000589577 HIST1H2AAQ96QV6 131 aa4.91□□□□□ -1.62
VPS25-204ENST00000589577 OR5M11Q96RB7 305 aa4.91□□□□□ -1.62
VPS25-204ENST00000589577 MGLLQ99685 303 aa4.91□□□□□ -1.62
VPS25-204ENST00000589577 NKX3-1Q99801 234 aaPredicted RBP4.91□□□□□ -1.62
VPS25-204ENST00000589577 PBOV1Q9GZY1 135 aa4.91□□□□□ -1.62
VPS25-204ENST00000589577 ABCB9Q9NP78 766 aa4.91□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms