RNA–Protein interactions for RNA: ENST00000589318.5

DDX39A-209, Transcript of DExD-box helicase 39A, human

TSL 1 (best)

Gene DDX39A, Length 1,903 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDX39A-209	ENST00000589318	MT-ND4L	P03901	98 aa		13.36	□□□□□ -0.27
DDX39A-209	ENST00000589318	TPT1	P13693	172 aa	Known RBP	13.36	□□□□□ -0.27
DDX39A-209	ENST00000589318	HLA-G	P17693	338 aa		13.36	□□□□□ -0.27
DDX39A-209	ENST00000589318	AGA	P20933	346 aa		13.36	□□□□□ -0.27
DDX39A-209	ENST00000589318	HTR5A	P47898	357 aa		13.36	□□□□□ -0.27
DDX39A-209	ENST00000589318	SPOCK1	Q08629	439 aa		13.36	□□□□□ -0.27
DDX39A-209	ENST00000589318	PNLIPRP3	Q17RR3	467 aa		13.36	□□□□□ -0.27
DDX39A-209	ENST00000589318	GFOD2	Q3B7J2	385 aa		13.36	□□□□□ -0.27
DDX39A-209	ENST00000589318	ACSF3	Q4G176	576 aa	Predicted RBP	13.36	□□□□□ -0.27
DDX39A-209	ENST00000589318	C9orf106	Q8NAJ2	232 aa		13.36	□□□□□ -0.27
DDX39A-209	ENST00000589318	EDARADD	Q8WWZ3	215 aa		13.36	□□□□□ -0.27
DDX39A-209	ENST00000589318	EXTL1	Q92935	676 aa		13.36	□□□□□ -0.27
DDX39A-209	ENST00000589318	TUBA4B	Q9H853	241 aa		13.36	□□□□□ -0.27
DDX39A-209	ENST00000589318	LUZP4	Q9P127	313 aa		13.36	□□□□□ -0.27
DDX39A-209	ENST00000589318	MEGF11	A6BM72	1044 aa		13.35	□□□□□ -0.27
DDX39A-209	ENST00000589318	OR2AT4	A6NND4	320 aa		13.35	□□□□□ -0.27
DDX39A-209	ENST00000589318	RCC1	P18754	421 aa	Predicted RBP	13.35	□□□□□ -0.27
DDX39A-209	ENST00000589318	NPBWR1	P48145	328 aa		13.35	□□□□□ -0.27
DDX39A-209	ENST00000589318	PJVK	Q0ZLH3	352 aa		13.35	□□□□□ -0.27
DDX39A-209	ENST00000589318	FAM214B	Q7L5A3	538 aa		13.35	□□□□□ -0.27
DDX39A-209	ENST00000589318	TMEM200A	Q86VY9	491 aa		13.35	□□□□□ -0.27
DDX39A-209	ENST00000589318	COMMD2	Q86X83	199 aa		13.35	□□□□□ -0.27
DDX39A-209	ENST00000589318	ZFP82	Q8N141	532 aa		13.35	□□□□□ -0.27
DDX39A-209	ENST00000589318	INO80E	Q8NBZ0	244 aa	Predicted RBP	13.35	□□□□□ -0.27
DDX39A-209	ENST00000589318	WNT2B	Q93097	391 aa		13.35	□□□□□ -0.27
DDX39A-209	ENST00000589318	CGGBP1	Q9UFW8	167 aa	Predicted RBP	13.35	□□□□□ -0.27
DDX39A-209	ENST00000589318	POMT1	Q9Y6A1	747 aa		13.35	□□□□□ -0.27
DDX39A-209	ENST00000589318	IGF2R	P11717	2491 aa		13.35	□□□□□ -0.27
DDX39A-209	ENST00000589318	AHRR	A9YTQ3	701 aa		13.35	□□□□□ -0.27
DDX39A-209	ENST00000589318		F8VVB4	439 aa		13.35	□□□□□ -0.27
DDX39A-209	ENST00000589318		F8VWA3	439 aa		13.35	□□□□□ -0.27
DDX39A-209	ENST00000589318	RRP8	O43159	456 aa	Known RBP	13.35	□□□□□ -0.27
DDX39A-209	ENST00000589318	HLA-H	P01893	362 aa		13.35	□□□□□ -0.27
DDX39A-209	ENST00000589318	GNAL	P38405	381 aa		13.35	□□□□□ -0.27
DDX39A-209	ENST00000589318	LY6G6F	Q5SQ64	297 aa		13.35	□□□□□ -0.27
DDX39A-209	ENST00000589318	RBMS3	Q6XE24	437 aa	Known RBP	13.35	□□□□□ -0.27
DDX39A-209	ENST00000589318	SLC30A7	Q8NEW0	376 aa		13.35	□□□□□ -0.27
DDX39A-209	ENST00000589318	OR51D1	Q8NGF3	324 aa		13.35	□□□□□ -0.27
DDX39A-209	ENST00000589318	KCNK15	Q9H427	330 aa		13.35	□□□□□ -0.27
DDX39A-209	ENST00000589318	TREM1	Q9NP99	234 aa		13.35	□□□□□ -0.27
DDX39A-209	ENST00000589318		V9GYS6	101 aa		13.35	□□□□□ -0.27
DDX39A-209	ENST00000589318		F5H0A9	414 aa	Predicted RBP	13.34	□□□□□ -0.27
DDX39A-209	ENST00000589318	KIR2DL2	P43627	348 aa	Predicted RBP	13.34	□□□□□ -0.27
DDX39A-209	ENST00000589318	RAB2A	P61019	212 aa		13.34	□□□□□ -0.27
DDX39A-209	ENST00000589318	DEFA6	Q01524	100 aa		13.34	□□□□□ -0.27
DDX39A-209	ENST00000589318	RAB11B	Q15907	218 aa		13.34	□□□□□ -0.27
DDX39A-209	ENST00000589318	ZNF124	Q15973	351 aa		13.34	□□□□□ -0.27
DDX39A-209	ENST00000589318	C1orf100	Q5SVJ3	147 aa		13.34	□□□□□ -0.27
DDX39A-209	ENST00000589318	GLYATL3	Q5SZD4	288 aa		13.34	□□□□□ -0.27
DDX39A-209	ENST00000589318	BEND4	Q6ZU67	534 aa		13.34	□□□□□ -0.27
DDX39A-209	ENST00000589318	OR5AS1	Q8N127	324 aa		13.34	□□□□□ -0.27
DDX39A-209	ENST00000589318	NKAIN3	Q8N8D7	197 aa		13.34	□□□□□ -0.27
DDX39A-209	ENST00000589318	STEAP2	Q8NFT2	490 aa		13.34	□□□□□ -0.27
DDX39A-209	ENST00000589318	OR52N4	Q8NGI2	321 aa		13.34	□□□□□ -0.27
DDX39A-209	ENST00000589318	OR5D14	Q8NGL3	314 aa		13.34	□□□□□ -0.27
DDX39A-209	ENST00000589318	OR1K1	Q8NGR3	316 aa		13.34	□□□□□ -0.27
DDX39A-209	ENST00000589318	OR13C9	Q8NGT0	318 aa		13.34	□□□□□ -0.27
DDX39A-209	ENST00000589318	SAT2	Q96F10	170 aa	Predicted RBP	13.34	□□□□□ -0.27
DDX39A-209	ENST00000589318	RCC2	Q9P258	522 aa	Known RBP	13.34	□□□□□ -0.27
DDX39A-209	ENST00000589318	GHRL	Q9UBU3	117 aa		13.34	□□□□□ -0.27
DDX39A-209	ENST00000589318	ZNF107	Q9UII5	783 aa	Predicted RBP	13.34	□□□□□ -0.27
DDX39A-209	ENST00000589318	MYO7B	Q6PIF6	2116 aa		13.34	□□□□□ -0.27
DDX39A-209	ENST00000589318	INTS1	Q8N201	2190 aa	Known RBP	13.33	□□□□□ -0.28
DDX39A-209	ENST00000589318	LOC100509620	A0A075B734	347 aa		13.33	□□□□□ -0.28
DDX39A-209	ENST00000589318	NDUFS6	O75380	124 aa	Known RBP	13.33	□□□□□ -0.28
DDX39A-209	ENST00000589318	DHRS3	O75911	302 aa		13.33	□□□□□ -0.28
DDX39A-209	ENST00000589318	IGHV2-5	P01817	119 aa		13.33	□□□□□ -0.28
DDX39A-209	ENST00000589318	OR4E1	P0C645	316 aa		13.33	□□□□□ -0.28
DDX39A-209	ENST00000589318	ZNF20	P17024	532 aa		13.33	□□□□□ -0.28
DDX39A-209	ENST00000589318	POU3F4	P49335	361 aa		13.33	□□□□□ -0.28
DDX39A-209	ENST00000589318	RAB5C	P51148	216 aa		13.33	□□□□□ -0.28
DDX39A-209	ENST00000589318	CAPZA1	P52907	286 aa		13.33	□□□□□ -0.28
DDX39A-209	ENST00000589318	ACTB	P60709	375 aa		13.33	□□□□□ -0.28
DDX39A-209	ENST00000589318	ACTG1	P63261	375 aa		13.33	□□□□□ -0.28
DDX39A-209	ENST00000589318	DNLZ	Q5SXM8	178 aa		13.33	□□□□□ -0.28
DDX39A-209	ENST00000589318	NSUN5P2	Q63ZY6	315 aa		13.33	□□□□□ -0.28
DDX39A-209	ENST00000589318	ZNF324B	Q6AW86	544 aa	Predicted RBP	13.33	□□□□□ -0.28
DDX39A-209	ENST00000589318	FAAP20	Q6NZ36	180 aa		13.33	□□□□□ -0.28
DDX39A-209	ENST00000589318	SEM1	Q6ZVN7	128 aa		13.33	□□□□□ -0.28
DDX39A-209	ENST00000589318	BIVM	Q86UB2	503 aa		13.33	□□□□□ -0.28
DDX39A-209	ENST00000589318	BCL2L2	Q92843	193 aa	Predicted RBP	13.33	□□□□□ -0.28
DDX39A-209	ENST00000589318	GCDH	Q92947	438 aa	Predicted RBP	13.33	□□□□□ -0.28
DDX39A-209	ENST00000589318	FAM3D	Q96BQ1	224 aa		13.33	□□□□□ -0.28
DDX39A-209	ENST00000589318	ZNF75A	Q96N20	296 aa		13.33	□□□□□ -0.28
DDX39A-209	ENST00000589318	WDR13	Q9H1Z4	485 aa		13.33	□□□□□ -0.28
DDX39A-209	ENST00000589318	OR10A2	Q9H208	303 aa		13.33	□□□□□ -0.28
DDX39A-209	ENST00000589318	PPP1R14D	Q9NXH3	145 aa		13.33	□□□□□ -0.28
DDX39A-209	ENST00000589318	RAX	Q9Y2V3	346 aa		13.33	□□□□□ -0.28
DDX39A-209	ENST00000589318	PIEZO2	Q9H5I5	2752 aa		13.33	□□□□□ -0.28
DDX39A-209	ENST00000589318	CRYAB	P02511	175 aa	Known RBP	13.33	□□□□□ -0.28
DDX39A-209	ENST00000589318	TMIGD3	P0DMS9	266 aa	Predicted RBP	13.33	□□□□□ -0.28
DDX39A-209	ENST00000589318	HTR2C	P28335	458 aa		13.33	□□□□□ -0.28
DDX39A-209	ENST00000589318	EFNB2	P52799	333 aa		13.33	□□□□□ -0.28
DDX39A-209	ENST00000589318	C2orf76	Q3KRA6	126 aa		13.33	□□□□□ -0.28
DDX39A-209	ENST00000589318	ZNF585A	Q6P3V2	769 aa		13.33	□□□□□ -0.28
DDX39A-209	ENST00000589318	RNF144B	Q7Z419	303 aa		13.33	□□□□□ -0.28
DDX39A-209	ENST00000589318		Q8NA96	180 aa		13.33	□□□□□ -0.28
DDX39A-209	ENST00000589318	OR4D6	Q8NGJ1	314 aa		13.33	□□□□□ -0.28
DDX39A-209	ENST00000589318	OR2AE1	Q8NHA4	323 aa		13.33	□□□□□ -0.28
DDX39A-209	ENST00000589318	GTF3A	Q92664	365 aa	Known RBP	13.33	□□□□□ -0.28

Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms