RNA–Protein interactions for RNA: ENST00000588917.2

CIRBP-220, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 1,087 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-220ENST00000588917 CRIP3Q6Q6R5 217 aa16.36■□□□□ 0.21
CIRBP-220ENST00000588917 CLEC9AQ6UXN8 241 aa16.36■□□□□ 0.21
CIRBP-220ENST00000588917 TPRA1Q86W33 373 aa16.36■□□□□ 0.21
CIRBP-220ENST00000588917 FAM58AQ8N1B3 248 aa16.36■□□□□ 0.21
CIRBP-220ENST00000588917 CIARTQ8N365 385 aaPredicted RBP16.36■□□□□ 0.21
CIRBP-220ENST00000588917 OR8B3Q8NGG8 313 aa16.36■□□□□ 0.21
CIRBP-220ENST00000588917 OR13F1Q8NGS4 319 aa16.36■□□□□ 0.21
CIRBP-220ENST00000588917 YIPF6Q96EC8 236 aa16.36■□□□□ 0.21
CIRBP-220ENST00000588917 C1orf159Q96HA4 380 aa16.36■□□□□ 0.21
CIRBP-220ENST00000588917 ZNF488Q96MN9 340 aa16.36■□□□□ 0.21
CIRBP-220ENST00000588917 OR8B2Q96RD0 313 aa16.36■□□□□ 0.21
CIRBP-220ENST00000588917 CHCHD6Q9BRQ6 235 aa16.36■□□□□ 0.21
CIRBP-220ENST00000588917 ELL3Q9HB65 397 aaPredicted RBP16.36■□□□□ 0.21
CIRBP-220ENST00000588917 NSD1Q96L73 2696 aaPredicted RBP16.36■□□□□ 0.21
CIRBP-220ENST00000588917 IGHV3OR15-7A0A075B7D8 119 aa16.35■□□□□ 0.21
CIRBP-220ENST00000588917 NKX6-3A6NJ46 265 aa16.35■□□□□ 0.21
CIRBP-220ENST00000588917 ADAM20O43506 726 aa16.35■□□□□ 0.21
CIRBP-220ENST00000588917 TFAP2AP05549 437 aa16.35■□□□□ 0.21
CIRBP-220ENST00000588917 PSG2P11465 335 aa16.35■□□□□ 0.21
CIRBP-220ENST00000588917 ADRA2CP18825 462 aa16.35■□□□□ 0.21
CIRBP-220ENST00000588917 BCL3P20749 454 aa16.35■□□□□ 0.21
CIRBP-220ENST00000588917 RBMXP38159 391 aaKnown RBP16.35■□□□□ 0.21
CIRBP-220ENST00000588917 NPBWR2P48146 333 aa16.35■□□□□ 0.21
CIRBP-220ENST00000588917 MTNR1BP49286 362 aa16.35■□□□□ 0.21
CIRBP-220ENST00000588917 HNRNPA0Q13151 305 aaKnown RBP16.35■□□□□ 0.21
CIRBP-220ENST00000588917 TMEM249Q2WGJ8 235 aa16.35■□□□□ 0.21
CIRBP-220ENST00000588917 SPIN3Q5JUX0 258 aa16.35■□□□□ 0.21
CIRBP-220ENST00000588917 STUMQ69YW2 141 aa16.35■□□□□ 0.21
CIRBP-220ENST00000588917 ELP2Q6IA86 826 aa16.35■□□□□ 0.21
CIRBP-220ENST00000588917 RNF144BQ7Z419 303 aa16.35■□□□□ 0.21
CIRBP-220ENST00000588917 LYPD6Q86Y78 171 aa16.35■□□□□ 0.21
CIRBP-220ENST00000588917 ANGPTL6Q8NI99 470 aa16.35■□□□□ 0.21
CIRBP-220ENST00000588917 EMG1Q92979 244 aaKnown RBP16.35■□□□□ 0.21
CIRBP-220ENST00000588917 CNTD2Q9H8S5 307 aa16.35■□□□□ 0.21
CIRBP-220ENST00000588917 HMG20AQ9NP66 347 aa16.35■□□□□ 0.21
CIRBP-220ENST00000588917 IL36GQ9NZH8 169 aa16.35■□□□□ 0.21
CIRBP-220ENST00000588917 MRPS28Q9Y2Q9 187 aaKnown RBP16.35■□□□□ 0.21
CIRBP-220ENST00000588917 V9GY05 133 aa16.35■□□□□ 0.21
CIRBP-220ENST00000588917 IGKV1-12A0A0C4DH73 117 aa16.34■□□□□ 0.21
CIRBP-220ENST00000588917 LOC100506127A0A0U1RQW1 187 aa16.34■□□□□ 0.21
CIRBP-220ENST00000588917 B4DSR2 109 aa16.34■□□□□ 0.21
CIRBP-220ENST00000588917 GPR37O15354 613 aa16.34■□□□□ 0.21
CIRBP-220ENST00000588917 TMPRSS2O15393 492 aa16.34■□□□□ 0.21
CIRBP-220ENST00000588917 AIREO43918 545 aa16.34■□□□□ 0.21
CIRBP-220ENST00000588917 IGKV1D-12P01611 117 aa16.34■□□□□ 0.21
CIRBP-220ENST00000588917 UBBP0CG47 229 aa16.34■□□□□ 0.21
CIRBP-220ENST00000588917 PRDX2P32119 198 aa16.34■□□□□ 0.21
CIRBP-220ENST00000588917 RPL5P46777 297 aaKnown RBP16.34■□□□□ 0.21
CIRBP-220ENST00000588917 GABRA2P47869 451 aa16.34■□□□□ 0.21
CIRBP-220ENST00000588917 OR3A4PP47883 348 aa16.34■□□□□ 0.21
CIRBP-220ENST00000588917 ALDH3B2P48448 385 aa16.34■□□□□ 0.21
CIRBP-220ENST00000588917 C11orf91Q3C1V1 193 aa16.34■□□□□ 0.21
CIRBP-220ENST00000588917 ESCO2Q56NI9 601 aa16.34■□□□□ 0.21
CIRBP-220ENST00000588917 C1orf100Q5SVJ3 147 aa16.34■□□□□ 0.21
CIRBP-220ENST00000588917 CYB5R2Q6BCY4 276 aa16.34■□□□□ 0.21
CIRBP-220ENST00000588917 GPR141Q7Z602 305 aa16.34■□□□□ 0.21
CIRBP-220ENST00000588917 Q8NFD4 153 aa16.34■□□□□ 0.21
CIRBP-220ENST00000588917 OR5T2Q8NGG2 359 aa16.34■□□□□ 0.21
CIRBP-220ENST00000588917 OR6M1Q8NGM8 313 aa16.34■□□□□ 0.21
CIRBP-220ENST00000588917 MRPS24Q96EL2 167 aaKnown RBP16.34■□□□□ 0.21
CIRBP-220ENST00000588917 AK6Q9Y3D8 172 aaKnown RBP16.34■□□□□ 0.21
CIRBP-220ENST00000588917 RFPL4AA6NLU0 287 aa16.33■□□□□ 0.2
CIRBP-220ENST00000588917 F5H0A9 414 aaPredicted RBP16.33■□□□□ 0.2
CIRBP-220ENST00000588917 RFPL4AL1F8VTS6 287 aa16.33■□□□□ 0.2
CIRBP-220ENST00000588917 SH2D1BO14796 132 aa16.33■□□□□ 0.2
CIRBP-220ENST00000588917 FOXH1O75593 365 aa16.33■□□□□ 0.2
CIRBP-220ENST00000588917 CHRM2P08172 466 aa16.33■□□□□ 0.2
CIRBP-220ENST00000588917 PRKACAP17612 351 aa16.33■□□□□ 0.2
CIRBP-220ENST00000588917 RAB3BP20337 219 aa16.33■□□□□ 0.2
CIRBP-220ENST00000588917 HTR2CP28335 458 aa16.33■□□□□ 0.2
CIRBP-220ENST00000588917 IL13RA1P78552 427 aa16.33■□□□□ 0.2
CIRBP-220ENST00000588917 HOXA4Q00056 320 aaPredicted RBP16.33■□□□□ 0.2
CIRBP-220ENST00000588917 ZNF146Q15072 292 aa16.33■□□□□ 0.2
CIRBP-220ENST00000588917 AWAT2Q6E213 333 aa16.33■□□□□ 0.2
CIRBP-220ENST00000588917 GLIPR1L1Q6UWM5 242 aa16.33■□□□□ 0.2
CIRBP-220ENST00000588917 ZNF788Q6ZQV5 615 aa16.33■□□□□ 0.2
CIRBP-220ENST00000588917 C1QL2Q7Z5L3 287 aa16.33■□□□□ 0.2
CIRBP-220ENST00000588917 LINC01356Q8N9X3 169 aa16.33■□□□□ 0.2
CIRBP-220ENST00000588917 MAPK1IP1LQ8NDC0 245 aa16.33■□□□□ 0.2
CIRBP-220ENST00000588917 TBC1D15Q8TC07 691 aa16.33■□□□□ 0.2
CIRBP-220ENST00000588917 SEH1LQ96EE3 360 aa16.33■□□□□ 0.2
CIRBP-220ENST00000588917 SDSLQ96GA7 329 aa16.33■□□□□ 0.2
CIRBP-220ENST00000588917 CCL13Q99616 98 aa16.33■□□□□ 0.2
CIRBP-220ENST00000588917 PLGRKTQ9HBL7 147 aa16.33■□□□□ 0.2
CIRBP-220ENST00000588917 CLN8Q9UBY8 286 aa16.33■□□□□ 0.2
CIRBP-220ENST00000588917 F8VVB4 439 aa16.32■□□□□ 0.2
CIRBP-220ENST00000588917 F8VWA3 439 aa16.32■□□□□ 0.2
CIRBP-220ENST00000588917 NDUFB3O43676 98 aa16.32■□□□□ 0.2
CIRBP-220ENST00000588917 HTR3BO95264 441 aa16.32■□□□□ 0.2
CIRBP-220ENST00000588917 SFTPBP07988 381 aa16.32■□□□□ 0.2
CIRBP-220ENST00000588917 GTF2F2P13984 249 aa16.32■□□□□ 0.2
CIRBP-220ENST00000588917 PITPNBP48739 271 aa16.32■□□□□ 0.2
CIRBP-220ENST00000588917 CAPZA1P52907 286 aa16.32■□□□□ 0.2
CIRBP-220ENST00000588917 FGF12P61328 243 aa16.32■□□□□ 0.2
CIRBP-220ENST00000588917 GNB2P62879 340 aa16.32■□□□□ 0.2
CIRBP-220ENST00000588917 LRRC10Q5BKY1 277 aa16.32■□□□□ 0.2
CIRBP-220ENST00000588917 CD276Q5ZPR3 534 aa16.32■□□□□ 0.2
CIRBP-220ENST00000588917 LYPD2Q6UXB3 125 aa16.32■□□□□ 0.2
CIRBP-220ENST00000588917 ZNF561Q8N587 486 aa16.32■□□□□ 0.2
CIRBP-220ENST00000588917 FUNDC2Q9BWH2 189 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms