RNA–Protein interactions for RNA: ENST00000588781.1

SPIDR-228, Transcript of scaffold protein involved in DNA repair, human

TSL 5

Gene SPIDR, Length 164 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPIDR-228	ENST00000588781	SOX7	Q9BT81	388 aa		6.24	□□□□□ -1.41
SPIDR-228	ENST00000588781	C1QTNF5	Q9BXJ0	243 aa		6.24	□□□□□ -1.41
SPIDR-228	ENST00000588781	PRRG4	Q9BZD6	226 aa		6.24	□□□□□ -1.41
SPIDR-228	ENST00000588781	WNT5B	Q9H1J7	359 aa		6.24	□□□□□ -1.41
SPIDR-228	ENST00000588781	RIMS4	Q9H426	269 aa	Predicted RBP	6.24	□□□□□ -1.41
SPIDR-228	ENST00000588781	NAA60	Q9H7X0	242 aa		6.24	□□□□□ -1.41
SPIDR-228	ENST00000588781	AKIRIN1	Q9H9L7	192 aa	Predicted RBP	6.24	□□□□□ -1.41
SPIDR-228	ENST00000588781	FN3KRP	Q9HA64	309 aa		6.24	□□□□□ -1.41
SPIDR-228	ENST00000588781	SPACA1	Q9HBV2	294 aa		6.24	□□□□□ -1.41
SPIDR-228	ENST00000588781	FSCN3	Q9NQT6	498 aa		6.24	□□□□□ -1.41
SPIDR-228	ENST00000588781	ASF1B	Q9NVP2	202 aa		6.24	□□□□□ -1.41
SPIDR-228	ENST00000588781	P4HTM	Q9NXG6	502 aa		6.24	□□□□□ -1.41
SPIDR-228	ENST00000588781	GPR160	Q9UJ42	338 aa		6.24	□□□□□ -1.41
SPIDR-228	ENST00000588781	TUBD1	Q9UJT1	453 aa		6.24	□□□□□ -1.41
SPIDR-228	ENST00000588781	NSG2	Q9Y328	171 aa		6.24	□□□□□ -1.41
SPIDR-228	ENST00000588781	DSP	P15924	2871 aa	Known RBP	6.24	□□□□□ -1.41
SPIDR-228	ENST00000588781	ARID1B	Q8NFD5	2236 aa	Predicted RBP	6.23	□□□□□ -1.41
SPIDR-228	ENST00000588781	ASXL3	Q9C0F0	2248 aa		6.23	□□□□□ -1.41
SPIDR-228	ENST00000588781	CEP295	Q9C0D2	2601 aa		6.23	□□□□□ -1.41
SPIDR-228	ENST00000588781		A0A1W2PP11	408 aa		6.23	□□□□□ -1.41
SPIDR-228	ENST00000588781	LRP5L	A4QPB2	252 aa		6.23	□□□□□ -1.41
SPIDR-228	ENST00000588781	LRRC3C	A6NJW4	275 aa		6.23	□□□□□ -1.41
SPIDR-228	ENST00000588781	ZNF724	A8MTY0	619 aa		6.23	□□□□□ -1.41
SPIDR-228	ENST00000588781		K7EPK0	472 aa		6.23	□□□□□ -1.41
SPIDR-228	ENST00000588781	SDCBP	O00560	298 aa	Predicted RBP	6.23	□□□□□ -1.41
SPIDR-228	ENST00000588781	TSPAN4	O14817	238 aa		6.23	□□□□□ -1.41
SPIDR-228	ENST00000588781	SNAPIN	O95295	136 aa		6.23	□□□□□ -1.41
SPIDR-228	ENST00000588781	KNG1	P01042	644 aa		6.23	□□□□□ -1.41
SPIDR-228	ENST00000588781	GLA	P06280	429 aa		6.23	□□□□□ -1.41
SPIDR-228	ENST00000588781	SFTPB	P07988	381 aa		6.23	□□□□□ -1.41
SPIDR-228	ENST00000588781	FCGR3A	P08637	254 aa		6.23	□□□□□ -1.41
SPIDR-228	ENST00000588781	HOXB5	P09067	269 aa		6.23	□□□□□ -1.41
SPIDR-228	ENST00000588781	CD79A	P11912	226 aa		6.23	□□□□□ -1.41
SPIDR-228	ENST00000588781	B4GALT1	P15291	398 aa		6.23	□□□□□ -1.41
SPIDR-228	ENST00000588781	ATF4	P18848	351 aa	Predicted RBP	6.23	□□□□□ -1.41
SPIDR-228	ENST00000588781	PVALB	P20472	110 aa	Predicted RBP	6.23	□□□□□ -1.41
SPIDR-228	ENST00000588781	GLRA1	P23415	457 aa		6.23	□□□□□ -1.41
SPIDR-228	ENST00000588781	CHAT	P28329	748 aa		6.23	□□□□□ -1.41
SPIDR-228	ENST00000588781	DUSP1	P28562	367 aa		6.23	□□□□□ -1.41
SPIDR-228	ENST00000588781	RAB5C	P51148	216 aa		6.23	□□□□□ -1.41
SPIDR-228	ENST00000588781	SUPT4H1	P63272	117 aa	Known RBP	6.23	□□□□□ -1.41
SPIDR-228	ENST00000588781	PSG4	Q00888	419 aa		6.23	□□□□□ -1.41
SPIDR-228	ENST00000588781	DEFA5	Q01523	94 aa		6.23	□□□□□ -1.41
SPIDR-228	ENST00000588781	PDZK1IP1	Q13113	114 aa		6.23	□□□□□ -1.41
SPIDR-228	ENST00000588781	BTN1A1	Q13410	526 aa		6.23	□□□□□ -1.41
SPIDR-228	ENST00000588781	IL13RA2	Q14627	380 aa		6.23	□□□□□ -1.41
SPIDR-228	ENST00000588781	RNPS1	Q15287	305 aa	Known RBP	6.23	□□□□□ -1.41
SPIDR-228	ENST00000588781	SWI5	Q1ZZU3	235 aa		6.23	□□□□□ -1.41
SPIDR-228	ENST00000588781	RSPO1	Q2MKA7	263 aa	Predicted RBP	6.23	□□□□□ -1.41
SPIDR-228	ENST00000588781	MPV17L	Q2QL34	196 aa		6.23	□□□□□ -1.41
SPIDR-228	ENST00000588781	SNAI3	Q3KNW1	292 aa		6.23	□□□□□ -1.41
SPIDR-228	ENST00000588781	ANKRD55	Q3KP44	614 aa		6.23	□□□□□ -1.41
SPIDR-228	ENST00000588781	BEX5	Q5H9J7	111 aa		6.23	□□□□□ -1.41
SPIDR-228	ENST00000588781	WIPI1	Q5MNZ9	446 aa	Predicted RBP	6.23	□□□□□ -1.41
SPIDR-228	ENST00000588781	GPR157	Q5UAW9	335 aa		6.23	□□□□□ -1.41
SPIDR-228	ENST00000588781	FAM122C	Q6P4D5	195 aa		6.23	□□□□□ -1.41
SPIDR-228	ENST00000588781		Q6ZS49	121 aa		6.23	□□□□□ -1.41
SPIDR-228	ENST00000588781	MRPL21	Q7Z2W9	205 aa	Known RBP	6.23	□□□□□ -1.41
SPIDR-228	ENST00000588781	C6orf201	Q7Z4U5	140 aa		6.23	□□□□□ -1.41
SPIDR-228	ENST00000588781	C1QL2	Q7Z5L3	287 aa		6.23	□□□□□ -1.41
SPIDR-228	ENST00000588781	MCEMP1	Q8IX19	187 aa		6.23	□□□□□ -1.41
SPIDR-228	ENST00000588781	FAM71E2	Q8N5Q1	922 aa		6.23	□□□□□ -1.41
SPIDR-228	ENST00000588781	SUMF1	Q8NBK3	374 aa		6.23	□□□□□ -1.41
SPIDR-228	ENST00000588781	BPIFC	Q8NFQ6	507 aa		6.23	□□□□□ -1.41
SPIDR-228	ENST00000588781	OR5L1	Q8NGL2	311 aa		6.23	□□□□□ -1.41
SPIDR-228	ENST00000588781	PIGC	Q92535	297 aa		6.23	□□□□□ -1.41
SPIDR-228	ENST00000588781	APOBEC3D	Q96AK3	386 aa	Predicted RBP	6.23	□□□□□ -1.41
SPIDR-228	ENST00000588781	LRRC46	Q96FV0	321 aa		6.23	□□□□□ -1.41
SPIDR-228	ENST00000588781	FER1L6-AS2	Q96M78	137 aa		6.23	□□□□□ -1.41
SPIDR-228	ENST00000588781	ZNF75A	Q96N20	296 aa		6.23	□□□□□ -1.41
SPIDR-228	ENST00000588781	TSNAX	Q99598	290 aa	Known RBP	6.23	□□□□□ -1.41
SPIDR-228	ENST00000588781	RNF126	Q9BV68	326 aa		6.23	□□□□□ -1.41
SPIDR-228	ENST00000588781	NKX6-2	Q9C056	277 aa	Predicted RBP	6.23	□□□□□ -1.41
SPIDR-228	ENST00000588781	RHOF	Q9HBH0	211 aa		6.23	□□□□□ -1.41
SPIDR-228	ENST00000588781	PLSCR2	Q9NRY7	297 aa		6.23	□□□□□ -1.41
SPIDR-228	ENST00000588781	GSKIP	Q9P0R6	139 aa		6.23	□□□□□ -1.41
SPIDR-228	ENST00000588781	LRFN1	Q9P244	771 aa		6.23	□□□□□ -1.41
SPIDR-228	ENST00000588781	AK3	Q9UIJ7	227 aa		6.23	□□□□□ -1.41
SPIDR-228	ENST00000588781	PCDHB10	Q9UN67	800 aa		6.23	□□□□□ -1.41
SPIDR-228	ENST00000588781	KLF13	Q9Y2Y9	288 aa	Predicted RBP	6.23	□□□□□ -1.41
SPIDR-228	ENST00000588781	TMED3	Q9Y3Q3	217 aa		6.23	□□□□□ -1.41
SPIDR-228	ENST00000588781		R4GN57	208 aa		6.23	□□□□□ -1.41
SPIDR-228	ENST00000588781	ITPR1	Q14643	2758 aa		6.23	□□□□□ -1.41
SPIDR-228	ENST00000588781	KIR2DS1	A0A191URI9	304 aa		6.22	□□□□□ -1.41
SPIDR-228	ENST00000588781	TMEM218	A2RU14	115 aa		6.22	□□□□□ -1.41
SPIDR-228	ENST00000588781	ZNF705E	A8MWA4	302 aa	Predicted RBP	6.22	□□□□□ -1.41
SPIDR-228	ENST00000588781		J3QW42	95 aa		6.22	□□□□□ -1.41
SPIDR-228	ENST00000588781	LGALS8	O00214	317 aa		6.22	□□□□□ -1.41
SPIDR-228	ENST00000588781	TERT	O14746	1132 aa	Known RBP	6.22	□□□□□ -1.41
SPIDR-228	ENST00000588781	GPR137B	O60478	399 aa		6.22	□□□□□ -1.41
SPIDR-228	ENST00000588781	DEDD	O75618	318 aa		6.22	□□□□□ -1.41
SPIDR-228	ENST00000588781	ADAP1	O75689	374 aa		6.22	□□□□□ -1.41
SPIDR-228	ENST00000588781	SCO1	O75880	301 aa		6.22	□□□□□ -1.41
SPIDR-228	ENST00000588781	ATG12	O94817	140 aa		6.22	□□□□□ -1.41
SPIDR-228	ENST00000588781	ACTL6A	O96019	429 aa		6.22	□□□□□ -1.41
SPIDR-228	ENST00000588781	DBH	P09172	617 aa		6.22	□□□□□ -1.41
SPIDR-228	ENST00000588781	RPS2	P15880	293 aa	Known RBP	6.22	□□□□□ -1.41
SPIDR-228	ENST00000588781	KLK2	P20151	261 aa		6.22	□□□□□ -1.41
SPIDR-228	ENST00000588781	IL32	P24001	234 aa		6.22	□□□□□ -1.41
SPIDR-228	ENST00000588781	RPL12	P30050	165 aa	Known RBP	6.22	□□□□□ -1.41

Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms