RNA–Protein interactions for RNA: ENST00000588210.1

CCDC43-203, Transcript of coiled-coil domain containing 43, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CCDC43, Length 2,067 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-203ENST00000588210 LHFPL1Q86WI0 220 aa12.69□□□□□ -0.38
CCDC43-203ENST00000588210 OR1S2Q8NGQ3 325 aa12.69□□□□□ -0.38
CCDC43-203ENST00000588210 OR14K1Q8NGZ2 314 aa12.69□□□□□ -0.38
CCDC43-203ENST00000588210 BANF2Q9H503 90 aa12.69□□□□□ -0.38
CCDC43-203ENST00000588210 HDGFL3Q9Y3E1 203 aa12.69□□□□□ -0.38
CCDC43-203ENST00000588210 FLVCR1Q9Y5Y0 555 aa12.69□□□□□ -0.38
CCDC43-203ENST00000588210 C13orf42A0A1B0GVH6 325 aa12.68□□□□□ -0.38
CCDC43-203ENST00000588210 A0A1W2PP11 408 aa12.68□□□□□ -0.38
CCDC43-203ENST00000588210 AQP7P3A6NL99 342 aa12.68□□□□□ -0.38
CCDC43-203ENST00000588210 QDPRP09417 244 aa12.68□□□□□ -0.38
CCDC43-203ENST00000588210 GLI4P10075 376 aa12.68□□□□□ -0.38
CCDC43-203ENST00000588210 PRF1P14222 555 aa12.68□□□□□ -0.38
CCDC43-203ENST00000588210 CTSSP25774 331 aa12.68□□□□□ -0.38
CCDC43-203ENST00000588210 TIMP3P35625 211 aa12.68□□□□□ -0.38
CCDC43-203ENST00000588210 ADORA2A-AS1P86434 159 aa12.68□□□□□ -0.38
CCDC43-203ENST00000588210 DEFA5Q01523 94 aa12.68□□□□□ -0.38
CCDC43-203ENST00000588210 UNQ6126/PRO20091Q6UXV3 157 aa12.68□□□□□ -0.38
CCDC43-203ENST00000588210 FAM57BQ71RH2 274 aa12.68□□□□□ -0.38
CCDC43-203ENST00000588210 FAM89BQ8N5H3 189 aa12.68□□□□□ -0.38
CCDC43-203ENST00000588210 ZNF283Q8N7M2 679 aa12.68□□□□□ -0.38
CCDC43-203ENST00000588210 OR5H2Q8NGV7 314 aa12.68□□□□□ -0.38
CCDC43-203ENST00000588210 RND1Q92730 232 aa12.68□□□□□ -0.38
CCDC43-203ENST00000588210 ARHGAP5-AS1Q96IT6 56 aa12.68□□□□□ -0.38
CCDC43-203ENST00000588210 ADGRG7Q96K78 797 aa12.68□□□□□ -0.38
CCDC43-203ENST00000588210 RNF126Q9BV68 326 aa12.68□□□□□ -0.38
CCDC43-203ENST00000588210 NKX6-2Q9C056 277 aaPredicted RBP12.68□□□□□ -0.38
CCDC43-203ENST00000588210 GHRLQ9UBU3 117 aa12.68□□□□□ -0.38
CCDC43-203ENST00000588210 IGKV1-9A0A0C4DH69 117 aa12.68□□□□□ -0.38
CCDC43-203ENST00000588210 FOXI3A8MTJ6 420 aaPredicted RBP12.68□□□□□ -0.38
CCDC43-203ENST00000588210 ZG16O60844 167 aa12.68□□□□□ -0.38
CCDC43-203ENST00000588210 CRTAPO75718 401 aaPredicted RBP12.68□□□□□ -0.38
CCDC43-203ENST00000588210 OPN1LWP04000 364 aa12.68□□□□□ -0.38
CCDC43-203ENST00000588210 ZNF43P17038 809 aa12.68□□□□□ -0.38
CCDC43-203ENST00000588210 SFTPDP35247 375 aa12.68□□□□□ -0.38
CCDC43-203ENST00000588210 ALDH3B1P43353 468 aa12.68□□□□□ -0.38
CCDC43-203ENST00000588210 NPY4RP50391 375 aa12.68□□□□□ -0.38
CCDC43-203ENST00000588210 GPER1Q99527 375 aa12.68□□□□□ -0.38
CCDC43-203ENST00000588210 OR10A2Q9H208 303 aa12.68□□□□□ -0.38
CCDC43-203ENST00000588210 TMEM100Q9NV29 134 aa12.68□□□□□ -0.38
CCDC43-203ENST00000588210 A0A0J9YW62 118 aa12.67□□□□□ -0.38
CCDC43-203ENST00000588210 MBD3L4A6NDZ8 208 aaPredicted RBP12.67□□□□□ -0.38
CCDC43-203ENST00000588210 MBD3L3A6NE82 208 aaPredicted RBP12.67□□□□□ -0.38
CCDC43-203ENST00000588210 MBD3L5A6NJ08 208 aaPredicted RBP12.67□□□□□ -0.38
CCDC43-203ENST00000588210 ZNF726A6NNF4 738 aa12.67□□□□□ -0.38
CCDC43-203ENST00000588210 H0YIZ8 118 aa12.67□□□□□ -0.38
CCDC43-203ENST00000588210 SIGLEC5O15389 551 aa12.67□□□□□ -0.38
CCDC43-203ENST00000588210 RAMP1O60894 148 aa12.67□□□□□ -0.38
CCDC43-203ENST00000588210 TSPAN9O75954 239 aa12.67□□□□□ -0.38
CCDC43-203ENST00000588210 NR2C1P13056 603 aa12.67□□□□□ -0.38
CCDC43-203ENST00000588210 AMY2BP19961 511 aa12.67□□□□□ -0.38
CCDC43-203ENST00000588210 AGAP20933 346 aa12.67□□□□□ -0.38
CCDC43-203ENST00000588210 LSM6P62312 80 aaKnown RBP12.67□□□□□ -0.38
CCDC43-203ENST00000588210 SUPT4H1P63272 117 aaKnown RBP12.67□□□□□ -0.38
CCDC43-203ENST00000588210 TMEM176BQ3YBM2 270 aaPredicted RBP12.67□□□□□ -0.38
CCDC43-203ENST00000588210 RIPPLY2Q5TAB7 128 aa12.67□□□□□ -0.38
CCDC43-203ENST00000588210 PRSS54Q6PEW0 395 aa12.67□□□□□ -0.38
CCDC43-203ENST00000588210 TMPPEQ6ZT21 453 aa12.67□□□□□ -0.38
CCDC43-203ENST00000588210 SEM1Q6ZVN7 128 aa12.67□□□□□ -0.38
CCDC43-203ENST00000588210 PNLDC1Q8NA58 520 aaKnown RBP12.67□□□□□ -0.38
CCDC43-203ENST00000588210 ZSCAN4Q8NAM6 433 aaPredicted RBP12.67□□□□□ -0.38
CCDC43-203ENST00000588210 CLRN3Q8NCR9 226 aa12.67□□□□□ -0.38
CCDC43-203ENST00000588210 OR13G1Q8NGZ3 307 aa12.67□□□□□ -0.38
CCDC43-203ENST00000588210 OR10D3Q8NH80 312 aa12.67□□□□□ -0.38
CCDC43-203ENST00000588210 OR2V1Q8NHB1 315 aa12.67□□□□□ -0.38
CCDC43-203ENST00000588210 MBD3L2Q8NHZ7 208 aaPredicted RBP12.67□□□□□ -0.38
CCDC43-203ENST00000588210 WNT2BQ93097 391 aa12.67□□□□□ -0.38
CCDC43-203ENST00000588210 RRNAD1Q96FB5 475 aaKnown RBP12.67□□□□□ -0.38
CCDC43-203ENST00000588210 CYTL1Q9NRR1 136 aa12.67□□□□□ -0.38
CCDC43-203ENST00000588210 CLCF1Q9UBD9 225 aa12.67□□□□□ -0.38
CCDC43-203ENST00000588210 NUDT19A8MXV4 375 aa12.66□□□□□ -0.38
CCDC43-203ENST00000588210 ABCD4O14678 606 aa12.66□□□□□ -0.38
CCDC43-203ENST00000588210 TNFSF11O14788 317 aa12.66□□□□□ -0.38
CCDC43-203ENST00000588210 THBS4P35443 961 aa12.66□□□□□ -0.38
CCDC43-203ENST00000588210 TAS2R46P59540 309 aa12.66□□□□□ -0.38
CCDC43-203ENST00000588210 SLC35A1P78382 337 aa12.66□□□□□ -0.38
CCDC43-203ENST00000588210 ECH1Q13011 328 aa12.66□□□□□ -0.38
CCDC43-203ENST00000588210 ARFRP1Q13795 201 aa12.66□□□□□ -0.38
CCDC43-203ENST00000588210 SGCAQ16586 387 aa12.66□□□□□ -0.38
CCDC43-203ENST00000588210 MRGPRGQ86SM5 289 aa12.66□□□□□ -0.38
CCDC43-203ENST00000588210 BAP18Q8IXM2 172 aa12.66□□□□□ -0.38
CCDC43-203ENST00000588210 ZNF808Q8N4W9 903 aaPredicted RBP12.66□□□□□ -0.38
CCDC43-203ENST00000588210 OR5T2Q8NGG2 359 aa12.66□□□□□ -0.38
CCDC43-203ENST00000588210 NARS2Q96I59 477 aaKnown RBP12.66□□□□□ -0.38
CCDC43-203ENST00000588210 RTBDNQ9BSG5 229 aaPredicted RBP12.66□□□□□ -0.38
CCDC43-203ENST00000588210 ZNF175Q9Y473 711 aa12.66□□□□□ -0.38
CCDC43-203ENST00000588210 ARHGAP21Q5T5U3 1957 aa12.66□□□□□ -0.38
CCDC43-203ENST00000588210 TMEM218A2RU14 115 aa12.66□□□□□ -0.38
CCDC43-203ENST00000588210 FAM74A7A6NL05 159 aa12.66□□□□□ -0.38
CCDC43-203ENST00000588210 KCNAB3O43448 404 aa12.66□□□□□ -0.38
CCDC43-203ENST00000588210 ATG12O94817 140 aa12.66□□□□□ -0.38
CCDC43-203ENST00000588210 NAT2P11245 290 aa12.66□□□□□ -0.38
CCDC43-203ENST00000588210 CD79AP11912 226 aa12.66□□□□□ -0.38
CCDC43-203ENST00000588210 CEACAM8P31997 349 aaPredicted RBP12.66□□□□□ -0.38
CCDC43-203ENST00000588210 SLC6A9P48067 706 aa12.66□□□□□ -0.38
CCDC43-203ENST00000588210 CARD18P57730 90 aa12.66□□□□□ -0.38
CCDC43-203ENST00000588210 SLC9A3R2Q15599 337 aa12.66□□□□□ -0.38
CCDC43-203ENST00000588210 STK11Q15831 433 aa12.66□□□□□ -0.38
CCDC43-203ENST00000588210 GFOD2Q3B7J2 385 aa12.66□□□□□ -0.38
CCDC43-203ENST00000588210 FAM74A3Q4VXF1 159 aa12.66□□□□□ -0.38
CCDC43-203ENST00000588210 AADACL3Q5VUY0 350 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms