RNA–Protein interactions for RNA: ENST00000587945.1

VMP1-206, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-206ENST00000587945 LOC107986453A0A1B0GWG9 222 aa11.61□□□□□ -0.55
VMP1-206ENST00000587945 TMEM82A0PJX8 343 aa11.61□□□□□ -0.55
VMP1-206ENST00000587945 FAM90A8PA6NJQ4 464 aa11.61□□□□□ -0.55
VMP1-206ENST00000587945 C17orf98A8MV24 154 aa11.61□□□□□ -0.55
VMP1-206ENST00000587945 SULT1C4O75897 302 aa11.61□□□□□ -0.55
VMP1-206ENST00000587945 ARG1P05089 322 aa11.61□□□□□ -0.55
VMP1-206ENST00000587945 CHRM2P08172 466 aa11.61□□□□□ -0.55
VMP1-206ENST00000587945 CSF1P09603 554 aa11.61□□□□□ -0.55
VMP1-206ENST00000587945 ZNF728P0DKX0 622 aa11.61□□□□□ -0.55
VMP1-206ENST00000587945 CALCBP10092 127 aa11.61□□□□□ -0.55
VMP1-206ENST00000587945 FCGR1AP12314 374 aa11.61□□□□□ -0.55
VMP1-206ENST00000587945 KIR3DL2P43630 455 aa11.61□□□□□ -0.55
VMP1-206ENST00000587945 FUT6P51993 359 aa11.61□□□□□ -0.55
VMP1-206ENST00000587945 ZNF85Q03923 595 aa11.61□□□□□ -0.55
VMP1-206ENST00000587945 HERPUD1Q15011 391 aa11.61□□□□□ -0.55
VMP1-206ENST00000587945 AANATQ16613 207 aa11.61□□□□□ -0.55
VMP1-206ENST00000587945 LDLRAD2Q5SZI1 272 aa11.61□□□□□ -0.55
VMP1-206ENST00000587945 Q6ZTK2 550 aa11.61□□□□□ -0.55
VMP1-206ENST00000587945 SLC25A26Q70HW3 274 aa11.61□□□□□ -0.55
VMP1-206ENST00000587945 KLHDC1Q8N7A1 406 aa11.61□□□□□ -0.55
VMP1-206ENST00000587945 RNF166Q96A37 237 aaPredicted RBP11.61□□□□□ -0.55
VMP1-206ENST00000587945 GABARAPL3Q9BY60 117 aa11.61□□□□□ -0.55
VMP1-206ENST00000587945 GNG8Q9UK08 70 aa11.61□□□□□ -0.55
VMP1-206ENST00000587945 GATBO75879 557 aaKnown RBP11.6□□□□□ -0.55
VMP1-206ENST00000587945 VSIG10L2P0DP72 767 aa11.6□□□□□ -0.55
VMP1-206ENST00000587945 DUSP1P28562 367 aa11.6□□□□□ -0.55
VMP1-206ENST00000587945 NPBWR2P48146 333 aa11.6□□□□□ -0.55
VMP1-206ENST00000587945 EDDM3AQ14507 147 aa11.6□□□□□ -0.55
VMP1-206ENST00000587945 HABP2Q14520 560 aaPredicted RBP11.6□□□□□ -0.55
VMP1-206ENST00000587945 FAM189A2Q15884 450 aa11.6□□□□□ -0.55
VMP1-206ENST00000587945 CCBE1Q6UXH8 406 aaPredicted RBP11.6□□□□□ -0.55
VMP1-206ENST00000587945 GDPD3Q7L5L3 318 aa11.6□□□□□ -0.55
VMP1-206ENST00000587945 TCF23Q7RTU1 214 aa11.6□□□□□ -0.55
VMP1-206ENST00000587945 EGFL6Q8IUX8 553 aa11.6□□□□□ -0.55
VMP1-206ENST00000587945 TPRX1Q8N7U7 411 aa11.6□□□□□ -0.55
VMP1-206ENST00000587945 OR8J1Q8NGP2 316 aa11.6□□□□□ -0.55
VMP1-206ENST00000587945 OR2T6Q8NHC8 308 aa11.6□□□□□ -0.55
VMP1-206ENST00000587945 EMG1Q92979 244 aaKnown RBP11.6□□□□□ -0.55
VMP1-206ENST00000587945 ADAT3Q96EY9 351 aaPredicted RBP11.6□□□□□ -0.55
VMP1-206ENST00000587945 BORCS8Q96FH0 119 aa11.6□□□□□ -0.55
VMP1-206ENST00000587945 CENPNQ96H22 339 aaPredicted RBP11.6□□□□□ -0.55
VMP1-206ENST00000587945 OSBPL10Q9BXB5 764 aa11.6□□□□□ -0.55
VMP1-206ENST00000587945 CHST5Q9GZS9 411 aa11.6□□□□□ -0.55
VMP1-206ENST00000587945 RAB18Q9NP72 206 aa11.6□□□□□ -0.55
VMP1-206ENST00000587945 IGKV1-9A0A0C4DH69 117 aa11.59□□□□□ -0.55
VMP1-206ENST00000587945 ODF3BA8MYP8 253 aa11.59□□□□□ -0.55
VMP1-206ENST00000587945 HAND1O96004 215 aa11.59□□□□□ -0.55
VMP1-206ENST00000587945 SERPINA3P01011 423 aa11.59□□□□□ -0.55
VMP1-206ENST00000587945 IGHA1P01876 353 aa11.59□□□□□ -0.55
VMP1-206ENST00000587945 JUNBP17275 347 aaPredicted RBP11.59□□□□□ -0.55
VMP1-206ENST00000587945 POU3F4P49335 361 aa11.59□□□□□ -0.55
VMP1-206ENST00000587945 RASSF2P50749 326 aa11.59□□□□□ -0.55
VMP1-206ENST00000587945 SNU13P55769 128 aaKnown RBP11.59□□□□□ -0.55
VMP1-206ENST00000587945 ISL1P61371 349 aa11.59□□□□□ -0.55
VMP1-206ENST00000587945 DYNC1I2Q13409 638 aaKnown RBP11.59□□□□□ -0.55
VMP1-206ENST00000587945 SSX2Q16385 188 aa11.59□□□□□ -0.55
VMP1-206ENST00000587945 FAM220AQ7Z4H9 259 aa11.59□□□□□ -0.55
VMP1-206ENST00000587945 TMEM219Q86XT9 240 aa11.59□□□□□ -0.55
VMP1-206ENST00000587945 OR8H2Q8N162 312 aa11.59□□□□□ -0.55
VMP1-206ENST00000587945 LYG1Q8N1E2 194 aa11.59□□□□□ -0.55
VMP1-206ENST00000587945 OR52N4Q8NGI2 321 aa11.59□□□□□ -0.55
VMP1-206ENST00000587945 OR13D1Q8NGV5 346 aa11.59□□□□□ -0.55
VMP1-206ENST00000587945 OR2G2Q8NGZ5 317 aa11.59□□□□□ -0.55
VMP1-206ENST00000587945 RFKQ969G6 155 aa11.59□□□□□ -0.55
VMP1-206ENST00000587945 SNX22Q96L94 193 aa11.59□□□□□ -0.55
VMP1-206ENST00000587945 NPFFR1Q9GZQ6 430 aa11.59□□□□□ -0.55
VMP1-206ENST00000587945 CHST6Q9GZX3 395 aa11.59□□□□□ -0.55
VMP1-206ENST00000587945 RANBP3Q9H6Z4 567 aaPredicted RBP11.59□□□□□ -0.55
VMP1-206ENST00000587945 RBFOX1Q9NWB1 397 aaKnown RBP11.59□□□□□ -0.55
VMP1-206ENST00000587945 VGLL3A8MV65 326 aa11.58□□□□□ -0.56
VMP1-206ENST00000587945 ENTPD6O75354 484 aa11.58□□□□□ -0.56
VMP1-206ENST00000587945 ATP5HO75947 161 aa11.58□□□□□ -0.56
VMP1-206ENST00000587945 UBCP0CG48 685 aaKnown RBP11.58□□□□□ -0.56
VMP1-206ENST00000587945 IGHV1-8P0DP01 117 aa11.58□□□□□ -0.56
VMP1-206ENST00000587945 BCL3P20749 454 aa11.58□□□□□ -0.56
VMP1-206ENST00000587945 GABRR1P24046 479 aa11.58□□□□□ -0.56
VMP1-206ENST00000587945 CDC42P60953 191 aa11.58□□□□□ -0.56
VMP1-206ENST00000587945 TMED1Q13445 227 aa11.58□□□□□ -0.56
VMP1-206ENST00000587945 GRK1Q15835 563 aa11.58□□□□□ -0.56
VMP1-206ENST00000587945 ZNF626Q68DY1 528 aa11.58□□□□□ -0.56
VMP1-206ENST00000587945 LIAT1Q6ZQX7 453 aa11.58□□□□□ -0.56
VMP1-206ENST00000587945 CCDC54Q8NEL0 328 aa11.58□□□□□ -0.56
VMP1-206ENST00000587945 OR11H6Q8NGC7 330 aa11.58□□□□□ -0.56
VMP1-206ENST00000587945 PYDC1Q8WXC3 89 aa11.58□□□□□ -0.56
VMP1-206ENST00000587945 CFHR4Q92496 578 aa11.58□□□□□ -0.56
VMP1-206ENST00000587945 FGGYQ96C11 551 aa11.58□□□□□ -0.56
VMP1-206ENST00000587945 RNFT2Q96EX2 444 aa11.58□□□□□ -0.56
VMP1-206ENST00000587945 ZNF714Q96N38 554 aa11.58□□□□□ -0.56
VMP1-206ENST00000587945 ZNF702PQ9H963 129 aa11.58□□□□□ -0.56
VMP1-206ENST00000587945 FRRS1LQ9P0K9 344 aa11.58□□□□□ -0.56
VMP1-206ENST00000587945 TCF19Q9Y242 345 aa11.58□□□□□ -0.56
VMP1-206ENST00000587945 TBL2Q9Y4P3 447 aaKnown RBP11.58□□□□□ -0.56
VMP1-206ENST00000587945 A6NDX4 124 aa11.57□□□□□ -0.56
VMP1-206ENST00000587945 PSPNO60542 156 aa11.57□□□□□ -0.56
VMP1-206ENST00000587945 CIB2O75838 187 aa11.57□□□□□ -0.56
VMP1-206ENST00000587945 PRKACAP17612 351 aa11.57□□□□□ -0.56
VMP1-206ENST00000587945 ATF1P18846 271 aa11.57□□□□□ -0.56
VMP1-206ENST00000587945 RBP2P50120 134 aa11.57□□□□□ -0.56
VMP1-206ENST00000587945 ATP1B3P54709 279 aa11.57□□□□□ -0.56
VMP1-206ENST00000587945 MTCP1P56278 107 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms