RNA–Protein interactions for RNA: ENST00000587525.5

CACNA1A-209, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 1 (best)

Gene CACNA1A, Length 3,765 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-209ENST00000587525 LINC00114Q6XXX2 140 aa12.09□□□□□ -0.47
CACNA1A-209ENST00000587525 LYZL2Q7Z4W2 148 aa12.09□□□□□ -0.47
CACNA1A-209ENST00000587525 ZNF501Q96CX3 271 aaPredicted RBP12.09□□□□□ -0.47
CACNA1A-209ENST00000587525 RRNAD1Q96FB5 475 aaKnown RBP12.09□□□□□ -0.47
CACNA1A-209ENST00000587525 PRDM6Q9NQX0 595 aa12.09□□□□□ -0.47
CACNA1A-209ENST00000587525 PPP1R3CQ9UQK1 317 aa12.09□□□□□ -0.47
CACNA1A-209ENST00000587525 LHFPL6Q9Y693 200 aa12.09□□□□□ -0.47
CACNA1A-209ENST00000587525 CYTIPO60759 359 aa12.09□□□□□ -0.47
CACNA1A-209ENST00000587525 IGKV3-11P04433 115 aa12.09□□□□□ -0.47
CACNA1A-209ENST00000587525 FAM189A2Q15884 450 aa12.09□□□□□ -0.47
CACNA1A-209ENST00000587525 MRGPRX4Q96LA9 322 aa12.09□□□□□ -0.47
CACNA1A-209ENST00000587525 ZNF488Q96MN9 340 aa12.09□□□□□ -0.47
CACNA1A-209ENST00000587525 NRIP2Q9BQI9 281 aa12.09□□□□□ -0.47
CACNA1A-209ENST00000587525 TOLLIPQ9H0E2 274 aa12.09□□□□□ -0.47
CACNA1A-209ENST00000587525 ZNF286AQ9HBT8 521 aa12.09□□□□□ -0.47
CACNA1A-209ENST00000587525 FAM24AA6NFZ4 105 aa12.08□□□□□ -0.47
CACNA1A-209ENST00000587525 CYB5BO43169 146 aa12.08□□□□□ -0.47
CACNA1A-209ENST00000587525 TK1P04183 234 aa12.08□□□□□ -0.47
CACNA1A-209ENST00000587525 RNF224P0DH78 156 aa12.08□□□□□ -0.47
CACNA1A-209ENST00000587525 FOSL1P15407 271 aa12.08□□□□□ -0.47
CACNA1A-209ENST00000587525 B2MP61769 119 aa12.08□□□□□ -0.47
CACNA1A-209ENST00000587525 ARG2P78540 354 aa12.08□□□□□ -0.47
CACNA1A-209ENST00000587525 SHBQ15464 509 aa12.08□□□□□ -0.47
CACNA1A-209ENST00000587525 GUK1Q16774 197 aa12.08□□□□□ -0.47
CACNA1A-209ENST00000587525 PABPC1L2AQ5JQF8 200 aa12.08□□□□□ -0.47
CACNA1A-209ENST00000587525 ZNF808Q8N4W9 903 aaPredicted RBP12.08□□□□□ -0.47
CACNA1A-209ENST00000587525 ZNF561Q8N587 486 aa12.08□□□□□ -0.47
CACNA1A-209ENST00000587525 SCGB1C1Q8TD33 95 aa12.08□□□□□ -0.47
CACNA1A-209ENST00000587525 RNF133Q8WVZ7 376 aa12.08□□□□□ -0.47
CACNA1A-209ENST00000587525 OCSTAMPQ9BR26 566 aa12.08□□□□□ -0.47
CACNA1A-209ENST00000587525 ZNF724A8MTY0 619 aa12.08□□□□□ -0.48
CACNA1A-209ENST00000587525 PPP1R2P9O14990 202 aa12.08□□□□□ -0.48
CACNA1A-209ENST00000587525 ACAA1P09110 424 aaPredicted RBP12.08□□□□□ -0.48
CACNA1A-209ENST00000587525 TMEM33P57088 247 aa12.08□□□□□ -0.48
CACNA1A-209ENST00000587525 CHCHD2P9Q5T1J5 151 aaPredicted RBP12.08□□□□□ -0.48
CACNA1A-209ENST00000587525 LILRB2Q8N423 598 aa12.08□□□□□ -0.48
CACNA1A-209ENST00000587525 OR2G3Q8NGZ4 309 aa12.08□□□□□ -0.48
CACNA1A-209ENST00000587525 INTS12Q96CB8 462 aaKnown RBP12.08□□□□□ -0.48
CACNA1A-209ENST00000587525 PIK3IP1Q96FE7 263 aa12.08□□□□□ -0.48
CACNA1A-209ENST00000587525 LPAR5Q9H1C0 372 aa12.08□□□□□ -0.48
CACNA1A-209ENST00000587525 G6PC2Q9NQR9 355 aa12.08□□□□□ -0.48
CACNA1A-209ENST00000587525 TUSC2O75896 110 aa12.08□□□□□ -0.48
CACNA1A-209ENST00000587525 CD63P08962 238 aa12.08□□□□□ -0.48
CACNA1A-209ENST00000587525 LPAR6P43657 344 aa12.08□□□□□ -0.48
CACNA1A-209ENST00000587525 RAB11AP62491 216 aa12.08□□□□□ -0.48
CACNA1A-209ENST00000587525 ANKRD55Q3KP44 614 aa12.08□□□□□ -0.48
CACNA1A-209ENST00000587525 ZNF684Q5T5D7 378 aa12.08□□□□□ -0.48
CACNA1A-209ENST00000587525 TMEM164Q5U3C3 297 aa12.08□□□□□ -0.48
CACNA1A-209ENST00000587525 GGNBP1Q5YKI7 109 aa12.08□□□□□ -0.48
CACNA1A-209ENST00000587525 RPUSD3Q6P087 351 aaKnown RBP12.08□□□□□ -0.48
CACNA1A-209ENST00000587525 GCNT2Q8N0V5 402 aa12.08□□□□□ -0.48
CACNA1A-209ENST00000587525 LRRC75AQ8NAA5 344 aa12.08□□□□□ -0.48
CACNA1A-209ENST00000587525 SH3BGRL2Q9UJC5 107 aa12.08□□□□□ -0.48
CACNA1A-209ENST00000587525 KIAA1671Q9BY89 1806 aa12.08□□□□□ -0.48
CACNA1A-209ENST00000587525 DUS4LO95620 317 aaKnown RBP12.07□□□□□ -0.48
CACNA1A-209ENST00000587525 MKXQ8IYA7 352 aa12.07□□□□□ -0.48
CACNA1A-209ENST00000587525 FRZBQ92765 325 aa12.07□□□□□ -0.48
CACNA1A-209ENST00000587525 LURAP1Q96LR2 239 aa12.07□□□□□ -0.48
CACNA1A-209ENST00000587525 C2orf50Q96LR7 162 aa12.07□□□□□ -0.48
CACNA1A-209ENST00000587525 GSN-AS1Q9NRJ2 163 aa12.07□□□□□ -0.48
CACNA1A-209ENST00000587525 FRMPD3Q5JV73 1810 aa12.07□□□□□ -0.48
CACNA1A-209ENST00000587525 CCDC187A0A096LP49 1063 aa12.07□□□□□ -0.48
CACNA1A-209ENST00000587525 CHATP28329 748 aa12.07□□□□□ -0.48
CACNA1A-209ENST00000587525 POLR2GP62487 172 aaKnown RBP eCLIP12.07□□□□□ -0.48
CACNA1A-209ENST00000587525 ZNF260Q3ZCT1 412 aa12.07□□□□□ -0.48
CACNA1A-209ENST00000587525 MMP26Q9NRE1 261 aa12.07□□□□□ -0.48
CACNA1A-209ENST00000587525 ZNF581Q9P0T4 197 aa12.07□□□□□ -0.48
CACNA1A-209ENST00000587525 TRAPPC2LH3BP13 241 aa12.07□□□□□ -0.48
CACNA1A-209ENST00000587525 IFNA4P05014 189 aa12.07□□□□□ -0.48
CACNA1A-209ENST00000587525 SPINK9Q5DT21 86 aa12.07□□□□□ -0.48
CACNA1A-209ENST00000587525 PLAC9Q5JTB6 97 aa12.07□□□□□ -0.48
CACNA1A-209ENST00000587525 AADACL3Q5VUY0 350 aa12.07□□□□□ -0.48
CACNA1A-209ENST00000587525 ZSCAN4Q8NAM6 433 aaPredicted RBP12.07□□□□□ -0.48
CACNA1A-209ENST00000587525 PSMF1Q92530 271 aa12.07□□□□□ -0.48
CACNA1A-209ENST00000587525 FZR1Q9UM11 496 aa12.07□□□□□ -0.48
CACNA1A-209ENST00000587525 GAB2Q9UQC2 676 aa12.07□□□□□ -0.48
CACNA1A-209ENST00000587525 MTCH2Q9Y6C9 303 aa12.07□□□□□ -0.48
CACNA1A-209ENST00000587525 SIRPB1O00241 398 aa12.06□□□□□ -0.48
CACNA1A-209ENST00000587525 RAB5CP51148 216 aa12.06□□□□□ -0.48
CACNA1A-209ENST00000587525 SNAI3Q3KNW1 292 aa12.06□□□□□ -0.48
CACNA1A-209ENST00000587525 LY6G6FQ5SQ64 297 aa12.06□□□□□ -0.48
CACNA1A-209ENST00000587525 RHBDD2Q6NTF9 364 aa12.06□□□□□ -0.48
CACNA1A-209ENST00000587525 LPCAT3Q6P1A2 487 aa12.06□□□□□ -0.48
CACNA1A-209ENST00000587525 SLC25A42Q86VD7 318 aa12.06□□□□□ -0.48
CACNA1A-209ENST00000587525 D2HGDHQ8N465 521 aa12.06□□□□□ -0.48
CACNA1A-209ENST00000587525 LINC00469Q8N7U9 141 aa12.06□□□□□ -0.48
CACNA1A-209ENST00000587525 ZNF519Q8TB69 540 aa12.06□□□□□ -0.48
CACNA1A-209ENST00000587525 GPX7Q96SL4 187 aaPredicted RBP12.06□□□□□ -0.48
CACNA1A-209ENST00000587525 CREBBPQ92793 2442 aa12.06□□□□□ -0.48
CACNA1A-209ENST00000587525 RNF222A6NCQ9 220 aa12.06□□□□□ -0.48
CACNA1A-209ENST00000587525 ZNF705FA8MVS1 300 aaPredicted RBP12.06□□□□□ -0.48
CACNA1A-209ENST00000587525 ATXN7O15265 892 aaPredicted RBP12.06□□□□□ -0.48
CACNA1A-209ENST00000587525 HPNP05981 417 aa12.06□□□□□ -0.48
CACNA1A-209ENST00000587525 ZNF705DP0CH99 300 aaPredicted RBP12.06□□□□□ -0.48
CACNA1A-209ENST00000587525 ZNF705BP0CI00 300 aaPredicted RBP12.06□□□□□ -0.48
CACNA1A-209ENST00000587525 MMP16P51512 607 aa12.06□□□□□ -0.48
CACNA1A-209ENST00000587525 GRB2P62993 217 aaKnown RBP12.06□□□□□ -0.48
CACNA1A-209ENST00000587525 NHLH2Q02577 135 aa12.06□□□□□ -0.48
CACNA1A-209ENST00000587525 ZNF383Q8NA42 475 aa12.06□□□□□ -0.48
CACNA1A-209ENST00000587525 CPT1CQ8TCG5 803 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms