RNA–Protein interactions for RNA: ENST00000585428.1

SDF2-202, Transcript of stromal cell derived factor 2, humanhuman

TSL 1 (best)

Gene SDF2, Length 924 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-202ENST00000585428 EFNB1P98172 346 aa11.59□□□□□ -0.55
SDF2-202ENST00000585428 DYNC1I2Q13409 638 aaKnown RBP11.59□□□□□ -0.55
SDF2-202ENST00000585428 SNAPC1Q16533 368 aa11.59□□□□□ -0.55
SDF2-202ENST00000585428 TMEM95Q3KNT9 176 aa11.59□□□□□ -0.55
SDF2-202ENST00000585428 GDPD3Q7L5L3 318 aa11.59□□□□□ -0.55
SDF2-202ENST00000585428 SNX22Q96L94 193 aa11.59□□□□□ -0.55
SDF2-202ENST00000585428 TEX12Q9BXU0 123 aa11.59□□□□□ -0.55
SDF2-202ENST00000585428 OR52A1Q9UKL2 312 aa11.59□□□□□ -0.55
SDF2-202ENST00000585428 R4GMQ9 66 aa11.59□□□□□ -0.55
SDF2-202ENST00000585428 COL7A1Q02388 2944 aa11.59□□□□□ -0.55
SDF2-202ENST00000585428 TMEM82A0PJX8 343 aa11.58□□□□□ -0.56
SDF2-202ENST00000585428 LOC110117498-PIK3R3F6TDL0 507 aa11.58□□□□□ -0.56
SDF2-202ENST00000585428 CCL1P22362 96 aa11.58□□□□□ -0.56
SDF2-202ENST00000585428 AZGP1P25311 298 aaKnown RBP11.58□□□□□ -0.56
SDF2-202ENST00000585428 EDDM3BP56851 147 aa11.58□□□□□ -0.56
SDF2-202ENST00000585428 ESRRGP62508 458 aa11.58□□□□□ -0.56
SDF2-202ENST00000585428 UBE2V2Q15819 145 aa11.58□□□□□ -0.56
SDF2-202ENST00000585428 ZNF322Q6U7Q0 402 aaPredicted RBP11.58□□□□□ -0.56
SDF2-202ENST00000585428 CENPVQ7Z7K6 275 aaPredicted RBP11.58□□□□□ -0.56
SDF2-202ENST00000585428 OR8H2Q8N162 312 aa11.58□□□□□ -0.56
SDF2-202ENST00000585428 ASCC1Q8N9N2 400 aaKnown RBP11.58□□□□□ -0.56
SDF2-202ENST00000585428 LRGUKQ96M69 825 aa11.58□□□□□ -0.56
SDF2-202ENST00000585428 ZNF714Q96N38 554 aa11.58□□□□□ -0.56
SDF2-202ENST00000585428 IKZF2Q9UKS7 526 aa11.58□□□□□ -0.56
SDF2-202ENST00000585428 IGKV1-27A0A075B6S5 117 aa11.57□□□□□ -0.56
SDF2-202ENST00000585428 IGHV2-26A0A0B4J1V2 119 aa11.57□□□□□ -0.56
SDF2-202ENST00000585428 A0A1W2PRX2 142 aa11.57□□□□□ -0.56
SDF2-202ENST00000585428 hADV38S2A0JD32 116 aa11.57□□□□□ -0.56
SDF2-202ENST00000585428 AQP12BA6NM10 295 aa11.57□□□□□ -0.56
SDF2-202ENST00000585428 H3BUI4 141 aa11.57□□□□□ -0.56
SDF2-202ENST00000585428 ATP8B1O43520 1251 aa11.57□□□□□ -0.56
SDF2-202ENST00000585428 ALDOBP05062 364 aa11.57□□□□□ -0.56
SDF2-202ENST00000585428 CRISP1P54107 249 aa11.57□□□□□ -0.56
SDF2-202ENST00000585428 KRTAP10-11P60412 298 aa11.57□□□□□ -0.56
SDF2-202ENST00000585428 CXCR4P61073 352 aa11.57□□□□□ -0.56
SDF2-202ENST00000585428 ACTR3P61158 418 aa11.57□□□□□ -0.56
SDF2-202ENST00000585428 SLC34A1Q06495 639 aa11.57□□□□□ -0.56
SDF2-202ENST00000585428 MEPCEQ7L2J0 689 aaKnown RBP11.57□□□□□ -0.56
SDF2-202ENST00000585428 AQP12AQ8IXF9 295 aa11.57□□□□□ -0.56
SDF2-202ENST00000585428 OR52N4Q8NGI2 321 aa11.57□□□□□ -0.56
SDF2-202ENST00000585428 CEP19Q96LK0 163 aa11.57□□□□□ -0.56
SDF2-202ENST00000585428 TTTY10Q9BZA0 68 aa11.57□□□□□ -0.56
SDF2-202ENST00000585428 MOB1AQ9H8S9 216 aa11.57□□□□□ -0.56
SDF2-202ENST00000585428 MRM2Q9UI43 246 aaKnown RBP11.57□□□□□ -0.56
SDF2-202ENST00000585428 SNX5Q9Y5X3 404 aa11.57□□□□□ -0.56
SDF2-202ENST00000585428 LINC00312Q9Y6C7 94 aa11.57□□□□□ -0.56
SDF2-202ENST00000585428 SESN1Q9Y6P5 492 aa11.57□□□□□ -0.56
SDF2-202ENST00000585428 FAM230AA0A1W2PPH8 454 aa11.56□□□□□ -0.56
SDF2-202ENST00000585428 TCRBV4S1A1TA0A5B7 111 aa11.56□□□□□ -0.56
SDF2-202ENST00000585428 F2RL2O00254 374 aa11.56□□□□□ -0.56
SDF2-202ENST00000585428 PRKYO43930 277 aa11.56□□□□□ -0.56
SDF2-202ENST00000585428 MMP23AO75900 390 aa11.56□□□□□ -0.56
SDF2-202ENST00000585428 HOXB6P17509 224 aaKnown RBP11.56□□□□□ -0.56
SDF2-202ENST00000585428 PTGES3Q15185 160 aaKnown RBP11.56□□□□□ -0.56
SDF2-202ENST00000585428 ARSJQ5FYB0 599 aaPredicted RBP11.56□□□□□ -0.56
SDF2-202ENST00000585428 BCL2L15Q5TBC7 163 aa11.56□□□□□ -0.56
SDF2-202ENST00000585428 AADACL4Q5VUY2 407 aa11.56□□□□□ -0.56
SDF2-202ENST00000585428 ZBTB49Q6ZSB9 765 aa11.56□□□□□ -0.56
SDF2-202ENST00000585428 C16orf82Q7Z2V1 217 aa11.56□□□□□ -0.56
SDF2-202ENST00000585428 BCDIN3DQ7Z5W3 292 aaKnown RBP11.56□□□□□ -0.56
SDF2-202ENST00000585428 EGFL6Q8IUX8 553 aa11.56□□□□□ -0.56
SDF2-202ENST00000585428 ZNF676Q8N7Q3 588 aa11.56□□□□□ -0.56
SDF2-202ENST00000585428 OR4P4Q8NGL7 312 aa11.56□□□□□ -0.56
SDF2-202ENST00000585428 RCC1LQ96I51 464 aaKnown RBP11.56□□□□□ -0.56
SDF2-202ENST00000585428 CNN2Q99439 309 aaKnown RBP11.56□□□□□ -0.56
SDF2-202ENST00000585428 MNTQ99583 582 aa11.56□□□□□ -0.56
SDF2-202ENST00000585428 CADM1Q9BY67 442 aaKnown RBP11.56□□□□□ -0.56
SDF2-202ENST00000585428 TMEM133Q9H2Q1 129 aa11.56□□□□□ -0.56
SDF2-202ENST00000585428 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP11.56□□□□□ -0.56
SDF2-202ENST00000585428 SLC7A11Q9UPY5 501 aa11.56□□□□□ -0.56
SDF2-202ENST00000585428 TSSC4Q9Y5U2 329 aaPredicted RBP11.56□□□□□ -0.56
SDF2-202ENST00000585428 WI2-2373I1.2A0A1W2PRP0 233 aa11.55□□□□□ -0.56
SDF2-202ENST00000585428 PSPNO60542 156 aa11.55□□□□□ -0.56
SDF2-202ENST00000585428 IGHA1P01876 353 aa11.55□□□□□ -0.56
SDF2-202ENST00000585428 AMY1AP04745 511 aa11.55□□□□□ -0.56
SDF2-202ENST00000585428 AMY2AP04746 511 aa11.55□□□□□ -0.56
SDF2-202ENST00000585428 CALB2P22676 271 aa11.55□□□□□ -0.56
SDF2-202ENST00000585428 HTR1DP28221 377 aa11.55□□□□□ -0.56
SDF2-202ENST00000585428 FUT6P51993 359 aa11.55□□□□□ -0.56
SDF2-202ENST00000585428 GYS2P54840 703 aa11.55□□□□□ -0.56
SDF2-202ENST00000585428 GNGT1P63211 74 aa11.55□□□□□ -0.56
SDF2-202ENST00000585428 SLC35A2P78381 396 aa11.55□□□□□ -0.56
SDF2-202ENST00000585428 EGFEM1PQ0D2K5 195 aa11.55□□□□□ -0.56
SDF2-202ENST00000585428 DEFB121Q5J5C9 76 aa11.55□□□□□ -0.56
SDF2-202ENST00000585428 PLEKHG7Q6ZR37 379 aa11.55□□□□□ -0.56
SDF2-202ENST00000585428 SLC35F2Q8IXU6 374 aa11.55□□□□□ -0.56
SDF2-202ENST00000585428 TPRX1Q8N7U7 411 aa11.55□□□□□ -0.56
SDF2-202ENST00000585428 NDNFQ8TB73 568 aa11.55□□□□□ -0.56
SDF2-202ENST00000585428 TRMT10AQ8TBZ6 339 aaKnown RBP11.55□□□□□ -0.56
SDF2-202ENST00000585428 MYDGFQ969H8 173 aa11.55□□□□□ -0.56
SDF2-202ENST00000585428 SLAMF9Q96A28 289 aa11.55□□□□□ -0.56
SDF2-202ENST00000585428 CLEC7AQ9BXN2 247 aa11.55□□□□□ -0.56
SDF2-202ENST00000585428 LIN7BQ9HAP6 207 aa11.55□□□□□ -0.56
SDF2-202ENST00000585428 ADGRL4Q9HBW9 690 aa11.55□□□□□ -0.56
SDF2-202ENST00000585428 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.55□□□□□ -0.56
SDF2-202ENST00000585428 INPP5EQ9NRR6 644 aa11.55□□□□□ -0.56
SDF2-202ENST00000585428 CLN6Q9NWW5 311 aa11.55□□□□□ -0.56
SDF2-202ENST00000585428 HHLA2Q9UM44 414 aa11.55□□□□□ -0.56
SDF2-202ENST00000585428 GTF2A1LQ9UNN4 478 aa11.55□□□□□ -0.56
SDF2-202ENST00000585428 DUS4LO95620 317 aaKnown RBP11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms