RNA–Protein interactions for RNA: ENST00000582252.1

CCDC47-204, Transcript of coiled-coil domain containing 47, humanhuman

TSL 2 BASIC

Gene CCDC47, Length 1,719 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-204ENST00000582252 PMELP40967 661 aa19.49■□□□□ 0.71
CCDC47-204ENST00000582252 RBM11P57052 281 aaKnown RBP19.49■□□□□ 0.71
CCDC47-204ENST00000582252 H2BFSP57053 126 aa19.49■□□□□ 0.71
CCDC47-204ENST00000582252 ARPC4P59998 168 aa19.49■□□□□ 0.71
CCDC47-204ENST00000582252 HLXQ14774 488 aaPredicted RBP19.49■□□□□ 0.71
CCDC47-204ENST00000582252 MKXQ8IYA7 352 aa19.49■□□□□ 0.71
CCDC47-204ENST00000582252 GCNT2Q8N0V5 402 aa19.49■□□□□ 0.71
CCDC47-204ENST00000582252 MITD1Q8WV92 249 aa19.49■□□□□ 0.71
CCDC47-204ENST00000582252 PRORYQ9H606 182 aa19.49■□□□□ 0.71
CCDC47-204ENST00000582252 RP1L1Q8IWN7 2480 aaPredicted RBP19.48■□□□□ 0.71
CCDC47-204ENST00000582252 PDCD6O75340 191 aa19.48■□□□□ 0.71
CCDC47-204ENST00000582252 WNT5AP41221 380 aa19.48■□□□□ 0.71
CCDC47-204ENST00000582252 PPP1R1AQ13522 171 aa19.48■□□□□ 0.71
CCDC47-204ENST00000582252 SURF2Q15527 256 aaPredicted RBP19.48■□□□□ 0.71
CCDC47-204ENST00000582252 C2orf68Q2NKX9 166 aa19.48■□□□□ 0.71
CCDC47-204ENST00000582252 NSUN5P2Q63ZY6 315 aa19.48■□□□□ 0.71
CCDC47-204ENST00000582252 SIGIRRQ6IA17 410 aa19.48■□□□□ 0.71
CCDC47-204ENST00000582252 FAM180AQ6UWF9 173 aa19.48■□□□□ 0.71
CCDC47-204ENST00000582252 SLC25A26Q70HW3 274 aa19.48■□□□□ 0.71
CCDC47-204ENST00000582252 TMEM200AQ86VY9 491 aa19.48■□□□□ 0.71
CCDC47-204ENST00000582252 LHFPL1Q86WI0 220 aa19.48■□□□□ 0.71
CCDC47-204ENST00000582252 CNEP1R1Q8N9A8 125 aa19.48■□□□□ 0.71
CCDC47-204ENST00000582252 C1orf162Q8NEQ5 155 aaPredicted RBP19.48■□□□□ 0.71
CCDC47-204ENST00000582252 Q8NFD4 153 aa19.48■□□□□ 0.71
CCDC47-204ENST00000582252 OR5M9Q8NGP3 310 aa19.48■□□□□ 0.71
CCDC47-204ENST00000582252 OR5M8Q8NGP6 311 aa19.48■□□□□ 0.71
CCDC47-204ENST00000582252 ZNF75AQ96N20 296 aa19.48■□□□□ 0.71
CCDC47-204ENST00000582252 CDH20Q9HBT6 801 aa19.48■□□□□ 0.71
CCDC47-204ENST00000582252 LUZP4Q9P127 313 aa19.48■□□□□ 0.71
CCDC47-204ENST00000582252 GPR132Q9UNW8 380 aa19.48■□□□□ 0.71
CCDC47-204ENST00000582252 HMSDA8MTL9 139 aa19.48■□□□□ 0.71
CCDC47-204ENST00000582252 GEMIN2O14893 280 aaKnown RBP19.48■□□□□ 0.71
CCDC47-204ENST00000582252 SIX6O95475 246 aa19.48■□□□□ 0.71
CCDC47-204ENST00000582252 FGL1Q08830 312 aa19.48■□□□□ 0.71
CCDC47-204ENST00000582252 TMEM128Q5BJH2 165 aa19.48■□□□□ 0.71
CCDC47-204ENST00000582252 OVCH2Q7RTZ1 564 aa19.48■□□□□ 0.71
CCDC47-204ENST00000582252 CALHM1Q8IU99 346 aa19.48■□□□□ 0.71
CCDC47-204ENST00000582252 SLC7A5P1Q8MH63 180 aa19.48■□□□□ 0.71
CCDC47-204ENST00000582252 NAXEQ8NCW5 288 aa19.48■□□□□ 0.71
CCDC47-204ENST00000582252 TMEM185AQ8NFB2 350 aa19.48■□□□□ 0.71
CCDC47-204ENST00000582252 OR8H1Q8NGG4 311 aa19.48■□□□□ 0.71
CCDC47-204ENST00000582252 FAAP24Q9BTP7 215 aa19.48■□□□□ 0.71
CCDC47-204ENST00000582252 ZNF230Q9UIE0 474 aaPredicted RBP19.48■□□□□ 0.71
CCDC47-204ENST00000582252 AK3Q9UIJ7 227 aa19.48■□□□□ 0.71
CCDC47-204ENST00000582252 PLSCR5A0PG75 271 aa19.47■□□□□ 0.71
CCDC47-204ENST00000582252 OR5B21A6NL26 309 aa19.47■□□□□ 0.71
CCDC47-204ENST00000582252 DUS4LO95620 317 aaKnown RBP19.47■□□□□ 0.71
CCDC47-204ENST00000582252 SFTPBP07988 381 aa19.47■□□□□ 0.71
CCDC47-204ENST00000582252 ZNF14P17017 642 aaPredicted RBP19.47■□□□□ 0.71
CCDC47-204ENST00000582252 AKR1C4P17516 323 aa19.47■□□□□ 0.71
CCDC47-204ENST00000582252 NFYAP23511 347 aaPredicted RBP19.47■□□□□ 0.71
CCDC47-204ENST00000582252 VAMP1P23763 118 aa19.47■□□□□ 0.71
CCDC47-204ENST00000582252 PER3P56645 1201 aa19.47■□□□□ 0.71
CCDC47-204ENST00000582252 PIGYQ3MUY2 71 aa19.47■□□□□ 0.71
CCDC47-204ENST00000582252 ACSF3Q4G176 576 aaPredicted RBP19.47■□□□□ 0.71
CCDC47-204ENST00000582252 ELP2Q6IA86 826 aa19.47■□□□□ 0.71
CCDC47-204ENST00000582252 PEG10Q86TG7 708 aaKnown RBP19.47■□□□□ 0.71
CCDC47-204ENST00000582252 OR10AD1Q8NGE0 317 aa19.47■□□□□ 0.71
CCDC47-204ENST00000582252 LILRB4Q8NHJ6 448 aa19.47■□□□□ 0.71
CCDC47-204ENST00000582252 HPSE2Q8WWQ2 592 aa19.47■□□□□ 0.71
CCDC47-204ENST00000582252 BOD1Q96IK1 185 aa19.47■□□□□ 0.71
CCDC47-204ENST00000582252 ZNF732B4DXR9 585 aa19.46■□□□□ 0.71
CCDC47-204ENST00000582252 L7N2F9 121 aa19.46■□□□□ 0.71
CCDC47-204ENST00000582252 HLA-GP17693 338 aa19.46■□□□□ 0.71
CCDC47-204ENST00000582252 HAAOP46952 286 aa19.46■□□□□ 0.71
CCDC47-204ENST00000582252 GPM6AP51674 278 aa19.46■□□□□ 0.71
CCDC47-204ENST00000582252 GABRA6Q16445 453 aa19.46■□□□□ 0.71
CCDC47-204ENST00000582252 C9orf106Q8NAJ2 232 aa19.46■□□□□ 0.71
CCDC47-204ENST00000582252 OR13G1Q8NGZ3 307 aa19.46■□□□□ 0.71
CCDC47-204ENST00000582252 SLC23A1Q9UHI7 598 aa19.46■□□□□ 0.71
CCDC47-204ENST00000582252 ANXA10Q9UJ72 324 aa19.46■□□□□ 0.71
CCDC47-204ENST00000582252 OSGIN2Q9Y236 505 aa19.46■□□□□ 0.71
CCDC47-204ENST00000582252 ZGRF1Q86YA3 2104 aa19.46■□□□□ 0.71
CCDC47-204ENST00000582252 M0R233 179 aa19.45■□□□□ 0.7
CCDC47-204ENST00000582252 FUT3P21217 361 aa19.45■□□□□ 0.7
CCDC47-204ENST00000582252 NPY4RP50391 375 aa19.45■□□□□ 0.7
CCDC47-204ENST00000582252 SRSF4Q08170 494 aaKnown RBP19.45■□□□□ 0.7
CCDC47-204ENST00000582252 NHLRC3Q5JS37 347 aa19.45■□□□□ 0.7
CCDC47-204ENST00000582252 DCAF12L2Q5VW00 463 aa19.45■□□□□ 0.7
CCDC47-204ENST00000582252 RFPL4BQ6ZWI9 263 aa19.45■□□□□ 0.7
CCDC47-204ENST00000582252 Q8NA96 180 aa19.45■□□□□ 0.7
CCDC47-204ENST00000582252 ADAD2Q8NCV1 583 aaKnown RBP19.45■□□□□ 0.7
CCDC47-204ENST00000582252 MAFIPQ8WZ33 124 aa19.45■□□□□ 0.7
CCDC47-204ENST00000582252 SULT4A1Q9BR01 284 aa19.45■□□□□ 0.7
CCDC47-204ENST00000582252 TRAPPC2LH3BP13 241 aa19.45■□□□□ 0.7
CCDC47-204ENST00000582252 LYZL6O75951 148 aa19.45■□□□□ 0.7
CCDC47-204ENST00000582252 COX5AP20674 150 aa19.45■□□□□ 0.7
CCDC47-204ENST00000582252 KIR2DL2P43627 348 aaPredicted RBP19.45■□□□□ 0.7
CCDC47-204ENST00000582252 SEC61A1P61619 476 aaKnown RBP19.45■□□□□ 0.7
CCDC47-204ENST00000582252 KRTCAP3Q53RY4 240 aa19.45■□□□□ 0.7
CCDC47-204ENST00000582252 FBXW12Q6X9E4 464 aa19.45■□□□□ 0.7
CCDC47-204ENST00000582252 ZNF573Q86YE8 665 aa19.45■□□□□ 0.7
CCDC47-204ENST00000582252 OR5P3Q8WZ94 311 aa19.45■□□□□ 0.7
CCDC47-204ENST00000582252 ELMOD3Q96FG2 381 aa19.45■□□□□ 0.7
CCDC47-204ENST00000582252 PDCD10Q9BUL8 212 aa19.45■□□□□ 0.7
CCDC47-204ENST00000582252 FN3KRPQ9HA64 309 aa19.45■□□□□ 0.7
CCDC47-204ENST00000582252 NECAP2Q9NVZ3 263 aa19.45■□□□□ 0.7
CCDC47-204ENST00000582252 COMMD9Q9P000 198 aa19.45■□□□□ 0.7
CCDC47-204ENST00000582252 C14orf166Q9Y224 244 aaKnown RBP19.45■□□□□ 0.7
CCDC47-204ENST00000582252 ATRXP46100 2492 aa19.45■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms