RNA–Protein interactions for RNA: ENST00000578700.5

SS18-210, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-210ENST00000578700 ZNF584Q8IVC4 421 aa8.67□□□□□ -1.02
SS18-210ENST00000578700 ZDHHC23Q8IYP9 409 aa8.67□□□□□ -1.02
SS18-210ENST00000578700 FAM169BQ8N8A8 192 aa8.67□□□□□ -1.02
SS18-210ENST00000578700 FAM168AQ92567 244 aa8.67□□□□□ -1.02
SS18-210ENST00000578700 YIPF5Q969M3 257 aa8.67□□□□□ -1.02
SS18-210ENST00000578700 PPP1R14BQ96C90 147 aa8.67□□□□□ -1.02
SS18-210ENST00000578700 ITPKCQ96DU7 683 aa8.67□□□□□ -1.02
SS18-210ENST00000578700 SPACA5Q96QH8 159 aa8.67□□□□□ -1.02
SS18-210ENST00000578700 GAL3ST1Q99999 423 aa8.67□□□□□ -1.02
SS18-210ENST00000578700 NUDT16L1Q9BRJ7 211 aaKnown RBP8.67□□□□□ -1.02
SS18-210ENST00000578700 COPZ2Q9P299 210 aa8.67□□□□□ -1.02
SS18-210ENST00000578700 MYEF2Q9P2K5 600 aaKnown RBP8.67□□□□□ -1.02
SS18-210ENST00000578700 STARD10Q9Y365 291 aa8.67□□□□□ -1.02
SS18-210ENST00000578700 SPEF1Q9Y4P9 236 aa8.67□□□□□ -1.02
SS18-210ENST00000578700 MPC1Q9Y5U8 109 aa8.67□□□□□ -1.02
SS18-210ENST00000578700 MEGF8Q7Z7M0 2845 aa8.66□□□□□ -1.02
SS18-210ENST00000578700 A0A096LNT2 108 aa8.66□□□□□ -1.02
SS18-210ENST00000578700 A0A1W2PR80 420 aa8.66□□□□□ -1.02
SS18-210ENST00000578700 ZNF850A8MQ14 1090 aa8.66□□□□□ -1.02
SS18-210ENST00000578700 E7EQL1 145 aa8.66□□□□□ -1.02
SS18-210ENST00000578700 WIPF1O43516 503 aa8.66□□□□□ -1.02
SS18-210ENST00000578700 ORC5O43913 435 aa8.66□□□□□ -1.02
SS18-210ENST00000578700 ICMTO60725 284 aa8.66□□□□□ -1.02
SS18-210ENST00000578700 CDC14BO60729 498 aa8.66□□□□□ -1.02
SS18-210ENST00000578700 CST4P01036 141 aa8.66□□□□□ -1.02
SS18-210ENST00000578700 LPLP06858 475 aa8.66□□□□□ -1.02
SS18-210ENST00000578700 ANOS1P23352 680 aa8.66□□□□□ -1.02
SS18-210ENST00000578700 GDNFP39905 211 aa8.66□□□□□ -1.02
SS18-210ENST00000578700 ALDH3B1P43353 468 aa8.66□□□□□ -1.02
SS18-210ENST00000578700 FABP6P51161 128 aa8.66□□□□□ -1.02
SS18-210ENST00000578700 BCAP31P51572 246 aa8.66□□□□□ -1.02
SS18-210ENST00000578700 PPP1CBP62140 327 aa8.66□□□□□ -1.02
SS18-210ENST00000578700 SNTB2Q13425 540 aaKnown RBP8.66□□□□□ -1.02
SS18-210ENST00000578700 SLC22A6Q4U2R8 563 aa8.66□□□□□ -1.02
SS18-210ENST00000578700 TIMM23BQ5SRD1 257 aa8.66□□□□□ -1.02
SS18-210ENST00000578700 SLC22A25Q6T423 547 aa8.66□□□□□ -1.02
SS18-210ENST00000578700 FBXL14Q8N1E6 418 aa8.66□□□□□ -1.02
SS18-210ENST00000578700 OR56B2PQ8NGI1 322 aa8.66□□□□□ -1.02
SS18-210ENST00000578700 OR51T1Q8NGJ9 327 aa8.66□□□□□ -1.02
SS18-210ENST00000578700 OR5D18Q8NGL1 313 aa8.66□□□□□ -1.02
SS18-210ENST00000578700 OR10R2Q8NGX6 335 aa8.66□□□□□ -1.02
SS18-210ENST00000578700 OR52I2Q8NH67 350 aa8.66□□□□□ -1.02
SS18-210ENST00000578700 TRIM63Q969Q1 353 aa8.66□□□□□ -1.02
SS18-210ENST00000578700 NKX3-1Q99801 234 aaPredicted RBP8.66□□□□□ -1.02
SS18-210ENST00000578700 BCL2L14Q9BZR8 327 aa8.66□□□□□ -1.02
SS18-210ENST00000578700 DPAGT1Q9H3H5 408 aa8.66□□□□□ -1.02
SS18-210ENST00000578700 AUNIPQ9H7T9 357 aa8.66□□□□□ -1.02
SS18-210ENST00000578700 TMEM160Q9NX00 188 aa8.66□□□□□ -1.02
SS18-210ENST00000578700 KCNS2Q9ULS6 477 aa8.66□□□□□ -1.02
SS18-210ENST00000578700 RHBDD3Q9Y3P4 386 aa8.66□□□□□ -1.02
SS18-210ENST00000578700 FUOMA2VDF0 154 aa8.65□□□□□ -1.02
SS18-210ENST00000578700 CD300LBA8K4G0 201 aa8.65□□□□□ -1.02
SS18-210ENST00000578700 TMEM14DPA8MWL7 114 aa8.65□□□□□ -1.02
SS18-210ENST00000578700 H3BUI4 141 aa8.65□□□□□ -1.02
SS18-210ENST00000578700 PLA2G10O15496 165 aa8.65□□□□□ -1.02
SS18-210ENST00000578700 LY6HO94772 140 aa8.65□□□□□ -1.02
SS18-210ENST00000578700 NGFP01138 241 aa8.65□□□□□ -1.02
SS18-210ENST00000578700 IGKV3-15P01624 115 aa8.65□□□□□ -1.02
SS18-210ENST00000578700 NAT2P11245 290 aa8.65□□□□□ -1.02
SS18-210ENST00000578700 GTF2F2P13984 249 aa8.65□□□□□ -1.02
SS18-210ENST00000578700 RAC2P15153 192 aa8.65□□□□□ -1.02
SS18-210ENST00000578700 SLC25A16P16260 332 aa8.65□□□□□ -1.02
SS18-210ENST00000578700 USF1P22415 310 aaPredicted RBP8.65□□□□□ -1.02
SS18-210ENST00000578700 CPT2P23786 658 aa8.65□□□□□ -1.02
SS18-210ENST00000578700 GCH1P30793 250 aa8.65□□□□□ -1.02
SS18-210ENST00000578700 RCVRNP35243 200 aa8.65□□□□□ -1.02
SS18-210ENST00000578700 WNT5AP41221 380 aa8.65□□□□□ -1.02
SS18-210ENST00000578700 VEGFCP49767 419 aa8.65□□□□□ -1.02
SS18-210ENST00000578700 ZNF83P51522 516 aa8.65□□□□□ -1.02
SS18-210ENST00000578700 UCP2P55851 309 aa8.65□□□□□ -1.02
SS18-210ENST00000578700 RPS27AP62979 156 aaKnown RBP8.65□□□□□ -1.02
SS18-210ENST00000578700 PRDX4Q13162 271 aa8.65□□□□□ -1.02
SS18-210ENST00000578700 HLXQ14774 488 aaPredicted RBP8.65□□□□□ -1.02
SS18-210ENST00000578700 CARTPTQ16568 116 aa8.65□□□□□ -1.02
SS18-210ENST00000578700 CEACAM21Q3KPI0 293 aa8.65□□□□□ -1.02
SS18-210ENST00000578700 CDNFQ49AH0 187 aa8.65□□□□□ -1.02
SS18-210ENST00000578700 FAM120AOSQ5T036 256 aa8.65□□□□□ -1.02
SS18-210ENST00000578700 OR10K2Q6IF99 312 aa8.65□□□□□ -1.02
SS18-210ENST00000578700 FBXW12Q6X9E4 464 aa8.65□□□□□ -1.02
SS18-210ENST00000578700 MUC15Q8N387 334 aa8.65□□□□□ -1.02
SS18-210ENST00000578700 OR1J1Q8NGS3 322 aa8.65□□□□□ -1.02
SS18-210ENST00000578700 RAB3CQ96E17 227 aa8.65□□□□□ -1.02
SS18-210ENST00000578700 MRPS24Q96EL2 167 aaKnown RBP8.65□□□□□ -1.02
SS18-210ENST00000578700 C1QTNF6Q9BXI9 259 aa8.65□□□□□ -1.02
SS18-210ENST00000578700 KRTAP3-3Q9BYR6 98 aa8.65□□□□□ -1.02
SS18-210ENST00000578700 KRTAP3-2Q9BYR7 98 aa8.65□□□□□ -1.02
SS18-210ENST00000578700 OR51B6Q9H340 312 aa8.65□□□□□ -1.02
SS18-210ENST00000578700 KCNK15Q9H427 330 aa8.65□□□□□ -1.02
SS18-210ENST00000578700 CBLN4Q9NTU7 201 aa8.65□□□□□ -1.02
SS18-210ENST00000578700 NKIRAS2Q9NYR9 191 aa8.65□□□□□ -1.02
SS18-210ENST00000578700 NPAP1Q9NZP6 1156 aa8.65□□□□□ -1.02
SS18-210ENST00000578700 ATP23Q9Y6H3 246 aa8.65□□□□□ -1.02
SS18-210ENST00000578700 PKD1L1Q8TDX9 2849 aa8.65□□□□□ -1.03
SS18-210ENST00000578700 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP8.64□□□□□ -1.03
SS18-210ENST00000578700 OR5B21A6NL26 309 aa8.64□□□□□ -1.03
SS18-210ENST00000578700 H7C417 338 aa8.64□□□□□ -1.03
SS18-210ENST00000578700 M0R1B8 84 aa8.64□□□□□ -1.03
SS18-210ENST00000578700 LANCL1O43813 399 aa8.64□□□□□ -1.03
SS18-210ENST00000578700 HTR3BO95264 441 aa8.64□□□□□ -1.03
SS18-210ENST00000578700 DHFRP00374 187 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms