RNA–Protein interactions for RNA: ENST00000577539.1

VAPA-203, Transcript of VAMP associated protein A, humanhuman

Gene VAPA, Length 3,760 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-203ENST00000577539 OPN1MW3P0DN78 364 aa4.66□□□□□ -1.66
VAPA-203ENST00000577539 B4GALT1P15291 398 aa4.66□□□□□ -1.66
VAPA-203ENST00000577539 CBX5P45973 191 aa4.66□□□□□ -1.66
VAPA-203ENST00000577539 HTR5AP47898 357 aa4.66□□□□□ -1.66
VAPA-203ENST00000577539 RPS16P62249 146 aaKnown RBP4.66□□□□□ -1.66
VAPA-203ENST00000577539 BLOC1S1P78537 153 aa4.66□□□□□ -1.66
VAPA-203ENST00000577539 SMCO1Q147U7 214 aa4.66□□□□□ -1.66
VAPA-203ENST00000577539 IAH1Q2TAA2 248 aaPredicted RBP4.66□□□□□ -1.66
VAPA-203ENST00000577539 ANKRD55Q3KP44 614 aa4.66□□□□□ -1.66
VAPA-203ENST00000577539 ZNF774Q6NX45 483 aa4.66□□□□□ -1.66
VAPA-203ENST00000577539 FAHD2BQ6P2I3 314 aaPredicted RBP4.66□□□□□ -1.66
VAPA-203ENST00000577539 TMEM88Q6PEY1 159 aa4.66□□□□□ -1.66
VAPA-203ENST00000577539 GPR137CQ8N3F9 429 aa4.66□□□□□ -1.66
VAPA-203ENST00000577539 OR5AP2Q8NGF4 316 aa4.66□□□□□ -1.66
VAPA-203ENST00000577539 BORCS8Q96FH0 119 aa4.66□□□□□ -1.66
VAPA-203ENST00000577539 FAHD2AQ96GK7 314 aa4.66□□□□□ -1.66
VAPA-203ENST00000577539 PNRC2Q9NPJ4 139 aaKnown RBP4.66□□□□□ -1.66
VAPA-203ENST00000577539 OR5AC2Q9NZP5 309 aa4.66□□□□□ -1.66
VAPA-203ENST00000577539 MYO15AQ9UKN7 3530 aa4.66□□□□□ -1.66
VAPA-203ENST00000577539 H0YIZ8 118 aa4.66□□□□□ -1.66
VAPA-203ENST00000577539 MFNGO00587 321 aa4.66□□□□□ -1.66
VAPA-203ENST00000577539 FARS2O95363 451 aaKnown RBP4.66□□□□□ -1.66
VAPA-203ENST00000577539 IFNA21P01568 189 aa4.66□□□□□ -1.66
VAPA-203ENST00000577539 H2AFB1P0C5Y9 115 aa4.66□□□□□ -1.66
VAPA-203ENST00000577539 CD37P11049 281 aa4.66□□□□□ -1.66
VAPA-203ENST00000577539 FOLR3P41439 243 aa4.66□□□□□ -1.66
VAPA-203ENST00000577539 RRADP55042 308 aa4.66□□□□□ -1.66
VAPA-203ENST00000577539 SCRN3Q0VDG4 424 aa4.66□□□□□ -1.66
VAPA-203ENST00000577539 ENDOGQ14249 297 aaKnown RBP4.66□□□□□ -1.66
VAPA-203ENST00000577539 ZNF345Q14585 488 aa4.66□□□□□ -1.66
VAPA-203ENST00000577539 ZNF273Q14593 569 aa4.66□□□□□ -1.66
VAPA-203ENST00000577539 PNLIPRP3Q17RR3 467 aa4.66□□□□□ -1.66
VAPA-203ENST00000577539 SNAI3Q3KNW1 292 aa4.66□□□□□ -1.66
VAPA-203ENST00000577539 ABCA11PQ4W5N1 156 aa4.66□□□□□ -1.66
VAPA-203ENST00000577539 INO80CQ6PI98 192 aaPredicted RBP4.66□□□□□ -1.66
VAPA-203ENST00000577539 AAED1Q7RTV5 226 aa4.66□□□□□ -1.66
VAPA-203ENST00000577539 ZSCAN4Q8NAM6 433 aaPredicted RBP4.66□□□□□ -1.66
VAPA-203ENST00000577539 ADPRHL1Q8NDY3 354 aa4.66□□□□□ -1.66
VAPA-203ENST00000577539 MAFAQ8NHW3 353 aaPredicted RBP4.66□□□□□ -1.66
VAPA-203ENST00000577539 TMEM230Q96A57 120 aa4.66□□□□□ -1.66
VAPA-203ENST00000577539 RRNAD1Q96FB5 475 aaKnown RBP4.66□□□□□ -1.66
VAPA-203ENST00000577539 LYZL4Q96KX0 146 aa4.66□□□□□ -1.66
VAPA-203ENST00000577539 C1orf147Q96MC9 270 aaPredicted RBP4.66□□□□□ -1.66
VAPA-203ENST00000577539 CMSS1Q9BQ75 279 aaKnown RBP4.66□□□□□ -1.66
VAPA-203ENST00000577539 PIGQQ9BRB3 760 aa4.66□□□□□ -1.66
VAPA-203ENST00000577539 FAAP24Q9BTP7 215 aa4.66□□□□□ -1.66
VAPA-203ENST00000577539 ADAT1Q9BUB4 502 aaKnown RBP4.66□□□□□ -1.66
VAPA-203ENST00000577539 PECRQ9BY49 303 aa4.66□□□□□ -1.66
VAPA-203ENST00000577539 PARP12Q9H0J9 701 aaKnown RBP4.66□□□□□ -1.66
VAPA-203ENST00000577539 CRLF2Q9HC73 371 aa4.66□□□□□ -1.66
VAPA-203ENST00000577539 NXT1Q9UKK6 140 aaKnown RBP4.66□□□□□ -1.66
VAPA-203ENST00000577539 MEMO1Q9Y316 297 aa4.66□□□□□ -1.66
VAPA-203ENST00000577539 HS3ST3B1Q9Y662 390 aa4.66□□□□□ -1.66
VAPA-203ENST00000577539 FAM74A7A6NL05 159 aa4.65□□□□□ -1.66
VAPA-203ENST00000577539 GPR31O00270 319 aa4.65□□□□□ -1.66
VAPA-203ENST00000577539 VAMP5O95183 116 aa4.65□□□□□ -1.66
VAPA-203ENST00000577539 APOC1P02654 83 aa4.65□□□□□ -1.66
VAPA-203ENST00000577539 LIFP15018 202 aa4.65□□□□□ -1.66
VAPA-203ENST00000577539 THBS4P35443 961 aa4.65□□□□□ -1.66
VAPA-203ENST00000577539 DSCR4P56555 118 aaPredicted RBP4.65□□□□□ -1.66
VAPA-203ENST00000577539 CARD18P57730 90 aa4.65□□□□□ -1.66
VAPA-203ENST00000577539 LSM6P62312 80 aaKnown RBP4.65□□□□□ -1.66
VAPA-203ENST00000577539 SRYQ05066 204 aa4.65□□□□□ -1.66
VAPA-203ENST00000577539 EXT1Q16394 746 aa4.65□□□□□ -1.66
VAPA-203ENST00000577539 SP6Q3SY56 376 aa4.65□□□□□ -1.66
VAPA-203ENST00000577539 FAM74A3Q4VXF1 159 aa4.65□□□□□ -1.66
VAPA-203ENST00000577539 VAX1Q5SQQ9 334 aa4.65□□□□□ -1.66
VAPA-203ENST00000577539 MOB3CQ70IA8 216 aa4.65□□□□□ -1.66
VAPA-203ENST00000577539 SGPP2Q8IWX5 399 aa4.65□□□□□ -1.66
VAPA-203ENST00000577539 SEMA6DQ8NFY4 1073 aa4.65□□□□□ -1.66
VAPA-203ENST00000577539 LHFPL5Q8TAF8 219 aa4.65□□□□□ -1.66
VAPA-203ENST00000577539 FNDC9Q8TBE3 224 aa4.65□□□□□ -1.66
VAPA-203ENST00000577539 PIGCQ92535 297 aa4.65□□□□□ -1.66
VAPA-203ENST00000577539 DYRK2Q92630 601 aa4.65□□□□□ -1.66
VAPA-203ENST00000577539 ARL11Q969Q4 196 aa4.65□□□□□ -1.66
VAPA-203ENST00000577539 PIK3IP1Q96FE7 263 aa4.65□□□□□ -1.66
VAPA-203ENST00000577539 OR10C1Q96KK4 312 aa4.65□□□□□ -1.66
VAPA-203ENST00000577539 SNX22Q96L94 193 aa4.65□□□□□ -1.66
VAPA-203ENST00000577539 PIGMQ9H3S5 423 aa4.65□□□□□ -1.66
VAPA-203ENST00000577539 PISDQ9UG56 409 aa4.65□□□□□ -1.66
VAPA-203ENST00000577539 DOCK7Q96N67 2140 aa4.65□□□□□ -1.66
VAPA-203ENST00000577539 IGKV1D-8A0A087WSZ0 117 aa4.65□□□□□ -1.66
VAPA-203ENST00000577539 IGLV3-32A0A0A0MS00 114 aa4.65□□□□□ -1.66
VAPA-203ENST00000577539 LY6G6EA0A0G2JKS1 128 aa4.65□□□□□ -1.66
VAPA-203ENST00000577539 PCP4L1A6NKN8 68 aa4.65□□□□□ -1.66
VAPA-203ENST00000577539 TOR1AO14656 332 aa4.65□□□□□ -1.66
VAPA-203ENST00000577539 TMEM11P17152 192 aa4.65□□□□□ -1.66
VAPA-203ENST00000577539 SPINK2P20155 84 aa4.65□□□□□ -1.66
VAPA-203ENST00000577539 RFC3P40938 356 aa4.65□□□□□ -1.66
VAPA-203ENST00000577539 AKR1D1P51857 326 aa4.65□□□□□ -1.66
VAPA-203ENST00000577539 PHLDA2Q53GA4 152 aa4.65□□□□□ -1.66
VAPA-203ENST00000577539 PRR31Q5SQ13 230 aa4.65□□□□□ -1.66
VAPA-203ENST00000577539 DRAM2Q6UX65 266 aa4.65□□□□□ -1.66
VAPA-203ENST00000577539 Q7L0L9 218 aa4.65□□□□□ -1.66
VAPA-203ENST00000577539 FADS6Q8N9I5 356 aa4.65□□□□□ -1.66
VAPA-203ENST00000577539 OR5T2Q8NGG2 359 aa4.65□□□□□ -1.66
VAPA-203ENST00000577539 REEP6Q96HR9 211 aa4.65□□□□□ -1.66
VAPA-203ENST00000577539 C2orf50Q96LR7 162 aa4.65□□□□□ -1.66
VAPA-203ENST00000577539 FER1L6-AS2Q96M78 137 aa4.65□□□□□ -1.66
VAPA-203ENST00000577539 RNF126Q9BV68 326 aa4.65□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 189.7 ms