RNA–Protein interactions for RNA: ENST00000577085.1

SF3B3-215, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 529 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-215ENST00000577085 EMG1Q92979 244 aaKnown RBP12.7□□□□□ -0.38
SF3B3-215ENST00000577085 FGGYQ96C11 551 aa12.7□□□□□ -0.38
SF3B3-215ENST00000577085 LGALS12Q96DT0 336 aa12.7□□□□□ -0.38
SF3B3-215ENST00000577085 ALG8Q9BVK2 526 aa12.7□□□□□ -0.38
SF3B3-215ENST00000577085 MTCH1Q9NZJ7 389 aa12.7□□□□□ -0.38
SF3B3-215ENST00000577085 ZNRD1Q9P1U0 126 aa12.7□□□□□ -0.38
SF3B3-215ENST00000577085 AASSQ9UDR5 926 aa12.7□□□□□ -0.38
SF3B3-215ENST00000577085 GLS2Q9UI32 602 aa12.7□□□□□ -0.38
SF3B3-215ENST00000577085 EXOGQ9Y2C4 368 aaKnown RBP12.7□□□□□ -0.38
SF3B3-215ENST00000577085 MMP24Q9Y5R2 645 aa12.7□□□□□ -0.38
SF3B3-215ENST00000577085 J3QRE1 110 aa12.69□□□□□ -0.38
SF3B3-215ENST00000577085 NDUFA7O95182 113 aa12.69□□□□□ -0.38
SF3B3-215ENST00000577085 RPSAP08865 295 aaKnown RBP12.69□□□□□ -0.38
SF3B3-215ENST00000577085 AZGP1P25311 298 aaKnown RBP12.69□□□□□ -0.38
SF3B3-215ENST00000577085 POU3F4P49335 361 aa12.69□□□□□ -0.38
SF3B3-215ENST00000577085 CCR9P51686 369 aa12.69□□□□□ -0.38
SF3B3-215ENST00000577085 EDDM3BP56851 147 aa12.69□□□□□ -0.38
SF3B3-215ENST00000577085 ERVFRD-1P60508 538 aa12.69□□□□□ -0.38
SF3B3-215ENST00000577085 ERVK11-1P61568 191 aa12.69□□□□□ -0.38
SF3B3-215ENST00000577085 MIDNQ504T8 468 aa12.69□□□□□ -0.38
SF3B3-215ENST00000577085 OLFML2AQ68BL7 652 aa12.69□□□□□ -0.38
SF3B3-215ENST00000577085 FDX2Q6P4F2 183 aa12.69□□□□□ -0.38
SF3B3-215ENST00000577085 LHFPL2Q6ZUX7 228 aa12.69□□□□□ -0.38
SF3B3-215ENST00000577085 LHFPL3Q86UP9 236 aa12.69□□□□□ -0.38
SF3B3-215ENST00000577085 ZSCAN4Q8NAM6 433 aaPredicted RBP12.69□□□□□ -0.38
SF3B3-215ENST00000577085 DNAAF1Q8NEP3 725 aa12.69□□□□□ -0.38
SF3B3-215ENST00000577085 OR5R1Q8NH85 324 aa12.69□□□□□ -0.38
SF3B3-215ENST00000577085 TNFRSF14Q92956 283 aa12.69□□□□□ -0.38
SF3B3-215ENST00000577085 SPSB1Q96BD6 273 aa12.69□□□□□ -0.38
SF3B3-215ENST00000577085 ADAT3Q96EY9 351 aaPredicted RBP12.69□□□□□ -0.38
SF3B3-215ENST00000577085 PELI1Q96FA3 418 aa12.69□□□□□ -0.38
SF3B3-215ENST00000577085 SLITRK2Q9H156 845 aa12.69□□□□□ -0.38
SF3B3-215ENST00000577085 INPP5EQ9NRR6 644 aa12.69□□□□□ -0.38
SF3B3-215ENST00000577085 VPREB3Q9UKI3 123 aa12.69□□□□□ -0.38
SF3B3-215ENST00000577085 RPL36Q9Y3U8 105 aaKnown RBP12.69□□□□□ -0.38
SF3B3-215ENST00000577085 TENM1Q9UKZ4 2725 aa12.68□□□□□ -0.38
SF3B3-215ENST00000577085 IGKV1-27A0A075B6S5 117 aa12.68□□□□□ -0.38
SF3B3-215ENST00000577085 CLPSL1A2RUU4 121 aa12.68□□□□□ -0.38
SF3B3-215ENST00000577085 K7N7A8 449 aa12.68□□□□□ -0.38
SF3B3-215ENST00000577085 ATF1P18846 271 aa12.68□□□□□ -0.38
SF3B3-215ENST00000577085 GABRR1P24046 479 aa12.68□□□□□ -0.38
SF3B3-215ENST00000577085 COX7A1P24310 79 aa12.68□□□□□ -0.38
SF3B3-215ENST00000577085 NANOS3P60323 173 aaKnown RBP12.68□□□□□ -0.38
SF3B3-215ENST00000577085 RAB40BQ12829 278 aa12.68□□□□□ -0.38
SF3B3-215ENST00000577085 MRPL28Q13084 256 aaKnown RBP12.68□□□□□ -0.38
SF3B3-215ENST00000577085 ALKBH1Q13686 389 aaKnown RBP12.68□□□□□ -0.38
SF3B3-215ENST00000577085 GALEQ14376 348 aa12.68□□□□□ -0.38
SF3B3-215ENST00000577085 ZSCAN26Q16670 478 aa12.68□□□□□ -0.38
SF3B3-215ENST00000577085 KLHL22Q53GT1 634 aa12.68□□□□□ -0.38
SF3B3-215ENST00000577085 UTS2BQ765I0 119 aa12.68□□□□□ -0.38
SF3B3-215ENST00000577085 RHOXF1Q8NHV9 184 aa12.68□□□□□ -0.38
SF3B3-215ENST00000577085 OPALINQ96PE5 141 aa12.68□□□□□ -0.38
SF3B3-215ENST00000577085 SLC29A1Q99808 456 aa12.68□□□□□ -0.38
SF3B3-215ENST00000577085 COMMD4Q9H0A8 199 aa12.68□□□□□ -0.38
SF3B3-215ENST00000577085 AMBNQ9NP70 447 aa12.68□□□□□ -0.38
SF3B3-215ENST00000577085 FAM118AQ9NWS6 357 aa12.68□□□□□ -0.38
SF3B3-215ENST00000577085 PCDHGB5Q9Y5G0 923 aa12.68□□□□□ -0.38
SF3B3-215ENST00000577085 CCL3L1P16619 93 aa12.67□□□□□ -0.38
SF3B3-215ENST00000577085 GBX2P52951 348 aaPredicted RBP12.67□□□□□ -0.38
SF3B3-215ENST00000577085 RELBQ01201 579 aa12.67□□□□□ -0.38
SF3B3-215ENST00000577085 EDDM3AQ14507 147 aa12.67□□□□□ -0.38
SF3B3-215ENST00000577085 TAF9Q16594 264 aa12.67□□□□□ -0.38
SF3B3-215ENST00000577085 BRICD5Q6PL45 260 aa12.67□□□□□ -0.38
SF3B3-215ENST00000577085 FAM58AQ8N1B3 248 aa12.67□□□□□ -0.38
SF3B3-215ENST00000577085 SYS1Q8N2H4 156 aa12.67□□□□□ -0.38
SF3B3-215ENST00000577085 BEND2Q8NDZ0 799 aa12.67□□□□□ -0.38
SF3B3-215ENST00000577085 ZNF696Q9H7X3 374 aa12.67□□□□□ -0.38
SF3B3-215ENST00000577085 SMPD3Q9NY59 655 aaPredicted RBP12.67□□□□□ -0.38
SF3B3-215ENST00000577085 RNF114Q9Y508 228 aa12.67□□□□□ -0.38
SF3B3-215ENST00000577085 TMEM212A6NML5 194 aa12.66□□□□□ -0.38
SF3B3-215ENST00000577085 E9PQ18 207 aa12.66□□□□□ -0.38
SF3B3-215ENST00000577085 F8VVB4 439 aa12.66□□□□□ -0.38
SF3B3-215ENST00000577085 F8VWA3 439 aa12.66□□□□□ -0.38
SF3B3-215ENST00000577085 HAND1O96004 215 aa12.66□□□□□ -0.38
SF3B3-215ENST00000577085 HCKP08631 526 aa12.66□□□□□ -0.38
SF3B3-215ENST00000577085 CCDC159P0C7I6 412 aa12.66□□□□□ -0.38
SF3B3-215ENST00000577085 PRKACAP17612 351 aa12.66□□□□□ -0.38
SF3B3-215ENST00000577085 GABRB1P18505 474 aa12.66□□□□□ -0.38
SF3B3-215ENST00000577085 BCL3P20749 454 aa12.66□□□□□ -0.38
SF3B3-215ENST00000577085 PEX2P28328 305 aa12.66□□□□□ -0.38
SF3B3-215ENST00000577085 TGFBR2P37173 567 aa12.66□□□□□ -0.38
SF3B3-215ENST00000577085 SNU13P55769 128 aaKnown RBP12.66□□□□□ -0.38
SF3B3-215ENST00000577085 ZNF273Q14593 569 aa12.66□□□□□ -0.38
SF3B3-215ENST00000577085 PRR31Q5SQ13 230 aa12.66□□□□□ -0.38
SF3B3-215ENST00000577085 ZNF782Q6ZMW2 699 aaPredicted RBP12.66□□□□□ -0.38
SF3B3-215ENST00000577085 OR8H2Q8N162 312 aa12.66□□□□□ -0.38
SF3B3-215ENST00000577085 OR51A4Q8NGJ6 313 aa12.66□□□□□ -0.38
SF3B3-215ENST00000577085 OR5D14Q8NGL3 314 aa12.66□□□□□ -0.38
SF3B3-215ENST00000577085 OR13C9Q8NGT0 318 aa12.66□□□□□ -0.38
SF3B3-215ENST00000577085 OR5AK2Q8NH90 309 aa12.66□□□□□ -0.38
SF3B3-215ENST00000577085 PPP1R35Q8TAP8 253 aa12.66□□□□□ -0.38
SF3B3-215ENST00000577085 HAVCR2Q8TDQ0 301 aa12.66□□□□□ -0.38
SF3B3-215ENST00000577085 TSEN15Q8WW01 171 aaKnown RBP12.66□□□□□ -0.38
SF3B3-215ENST00000577085 RNF166Q96A37 237 aaPredicted RBP12.66□□□□□ -0.38
SF3B3-215ENST00000577085 RFT1Q96AA3 541 aa12.66□□□□□ -0.38
SF3B3-215ENST00000577085 SNX22Q96L94 193 aa12.66□□□□□ -0.38
SF3B3-215ENST00000577085 RDH12Q96NR8 316 aa12.66□□□□□ -0.38
SF3B3-215ENST00000577085 ISG20L2Q9H9L3 353 aaKnown RBP12.66□□□□□ -0.38
SF3B3-215ENST00000577085 RBFOX1Q9NWB1 397 aaKnown RBP12.66□□□□□ -0.38
SF3B3-215ENST00000577085 ERVK13-1Q9NX77 482 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms