RNA–Protein interactions for RNA: ENST00000576921.1

HCFC1R1-209, Transcript of host cell factor C1 regulator 1, humanhuman

TSL 1 (best)

Gene HCFC1R1, Length 1,199 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1R1-209ENST00000576921 RPL36Q9Y3U8 105 aaKnown RBP17.32■□□□□ 0.36
HCFC1R1-209ENST00000576921 IGKV1-9A0A0C4DH69 117 aa17.31■□□□□ 0.36
HCFC1R1-209ENST00000576921 MEIOCA2RUB1 952 aa17.31■□□□□ 0.36
HCFC1R1-209ENST00000576921 OR4C45A6NMZ5 311 aa17.31■□□□□ 0.36
HCFC1R1-209ENST00000576921 ANGPTL7O43827 346 aa17.31■□□□□ 0.36
HCFC1R1-209ENST00000576921 CYB5AP00167 134 aa17.31■□□□□ 0.36
HCFC1R1-209ENST00000576921 PAHP00439 452 aa17.31■□□□□ 0.36
HCFC1R1-209ENST00000576921 TK1P04183 234 aa17.31■□□□□ 0.36
HCFC1R1-209ENST00000576921 FBP1P09467 338 aa17.31■□□□□ 0.36
HCFC1R1-209ENST00000576921 ATF1P18846 271 aa17.31■□□□□ 0.36
HCFC1R1-209ENST00000576921 MDKP21741 143 aaPredicted RBP17.31■□□□□ 0.36
HCFC1R1-209ENST00000576921 SAA4P35542 130 aa17.31■□□□□ 0.36
HCFC1R1-209ENST00000576921 MTCP1P56278 107 aa17.31■□□□□ 0.36
HCFC1R1-209ENST00000576921 SMN1Q16637 294 aaKnown RBP17.31■□□□□ 0.36
HCFC1R1-209ENST00000576921 LPCAT4Q643R3 524 aa17.31■□□□□ 0.36
HCFC1R1-209ENST00000576921 UTS2BQ765I0 119 aa17.31■□□□□ 0.36
HCFC1R1-209ENST00000576921 LDLRAD3Q86YD5 345 aa17.31■□□□□ 0.36
HCFC1R1-209ENST00000576921 EGFL6Q8IUX8 553 aa17.31■□□□□ 0.36
HCFC1R1-209ENST00000576921 DNAAF1Q8NEP3 725 aa17.31■□□□□ 0.36
HCFC1R1-209ENST00000576921 OR5D13Q8NGL4 314 aa17.31■□□□□ 0.36
HCFC1R1-209ENST00000576921 CYGBQ8WWM9 190 aa17.31■□□□□ 0.36
HCFC1R1-209ENST00000576921 RFT1Q96AA3 541 aa17.31■□□□□ 0.36
HCFC1R1-209ENST00000576921 A0A1W2PPH5 198 aa17.3■□□□□ 0.36
HCFC1R1-209ENST00000576921 SPRY1O43609 319 aaPredicted RBP17.3■□□□□ 0.36
HCFC1R1-209ENST00000576921 CLIC3O95833 236 aa17.3■□□□□ 0.36
HCFC1R1-209ENST00000576921 PRKACBP22694 351 aa17.3■□□□□ 0.36
HCFC1R1-209ENST00000576921 SNU13P55769 128 aaKnown RBP17.3■□□□□ 0.36
HCFC1R1-209ENST00000576921 RCN1Q15293 331 aa17.3■□□□□ 0.36
HCFC1R1-209ENST00000576921 TMEM200BQ69YZ2 307 aa17.3■□□□□ 0.36
HCFC1R1-209ENST00000576921 LHFPL2Q6ZUX7 228 aa17.3■□□□□ 0.36
HCFC1R1-209ENST00000576921 OR13C9Q8NGT0 318 aa17.3■□□□□ 0.36
HCFC1R1-209ENST00000576921 OPALINQ96PE5 141 aa17.3■□□□□ 0.36
HCFC1R1-209ENST00000576921 ZNF747Q9BV97 191 aa17.3■□□□□ 0.36
HCFC1R1-209ENST00000576921 IL36RNQ9UBH0 155 aa17.3■□□□□ 0.36
HCFC1R1-209ENST00000576921 E9PI62 339 aa17.29■□□□□ 0.36
HCFC1R1-209ENST00000576921 WBP4O75554 376 aaKnown RBP17.29■□□□□ 0.36
HCFC1R1-209ENST00000576921 CCL3L1P16619 93 aa17.29■□□□□ 0.36
HCFC1R1-209ENST00000576921 BCL3P20749 454 aa17.29■□□□□ 0.36
HCFC1R1-209ENST00000576921 PEX2P28328 305 aa17.29■□□□□ 0.36
HCFC1R1-209ENST00000576921 IER3P46695 156 aa17.29■□□□□ 0.36
HCFC1R1-209ENST00000576921 UBE2E1P51965 193 aa17.29■□□□□ 0.36
HCFC1R1-209ENST00000576921 GBX2P52951 348 aaPredicted RBP17.29■□□□□ 0.36
HCFC1R1-209ENST00000576921 KLHL22Q53GT1 634 aa17.29■□□□□ 0.36
HCFC1R1-209ENST00000576921 MKXQ8IYA7 352 aa17.29■□□□□ 0.36
HCFC1R1-209ENST00000576921 CNIH3Q8TBE1 160 aa17.29■□□□□ 0.36
HCFC1R1-209ENST00000576921 TSEN15Q8WW01 171 aaKnown RBP17.29■□□□□ 0.36
HCFC1R1-209ENST00000576921 SPSB1Q96BD6 273 aa17.29■□□□□ 0.36
HCFC1R1-209ENST00000576921 SPACA5Q96QH8 159 aa17.29■□□□□ 0.36
HCFC1R1-209ENST00000576921 ZNF649Q9BS31 505 aa17.29■□□□□ 0.36
HCFC1R1-209ENST00000576921 COMMD4Q9H0A8 199 aa17.29■□□□□ 0.36
HCFC1R1-209ENST00000576921 FAM234AQ9H0X4 552 aa17.29■□□□□ 0.36
HCFC1R1-209ENST00000576921 DPAGT1Q9H3H5 408 aa17.29■□□□□ 0.36
HCFC1R1-209ENST00000576921 RBFOX1Q9NWB1 397 aaKnown RBP17.29■□□□□ 0.36
HCFC1R1-209ENST00000576921 ZNRD1Q9P1U0 126 aa17.29■□□□□ 0.36
HCFC1R1-209ENST00000576921 MEX3AA1L020 520 aaKnown RBP17.28■□□□□ 0.36
HCFC1R1-209ENST00000576921 BTBD17A6NE02 478 aa17.28■□□□□ 0.36
HCFC1R1-209ENST00000576921 K7N7A8 449 aa17.28■□□□□ 0.36
HCFC1R1-209ENST00000576921 GPR137BO60478 399 aa17.28■□□□□ 0.36
HCFC1R1-209ENST00000576921 CHRM2P08172 466 aa17.28■□□□□ 0.36
HCFC1R1-209ENST00000576921 CALCBP10092 127 aa17.28■□□□□ 0.36
HCFC1R1-209ENST00000576921 NPBWR2P48146 333 aa17.28■□□□□ 0.36
HCFC1R1-209ENST00000576921 RAG2P55895 527 aa17.28■□□□□ 0.36
HCFC1R1-209ENST00000576921 EDDM3BP56851 147 aa17.28■□□□□ 0.36
HCFC1R1-209ENST00000576921 ZNF273Q14593 569 aa17.28■□□□□ 0.36
HCFC1R1-209ENST00000576921 ZNF691Q5VV52 312 aa17.28■□□□□ 0.36
HCFC1R1-209ENST00000576921 Q8IYB0 196 aa17.28■□□□□ 0.36
HCFC1R1-209ENST00000576921 OR5AK2Q8NH90 309 aa17.28■□□□□ 0.36
HCFC1R1-209ENST00000576921 PDCD1LG2Q9BQ51 273 aa17.28■□□□□ 0.36
HCFC1R1-209ENST00000576921 NEK6Q9HC98 313 aa17.28■□□□□ 0.36
HCFC1R1-209ENST00000576921 MRPS18AQ9NVS2 196 aaKnown RBP17.28■□□□□ 0.36
HCFC1R1-209ENST00000576921 SF3B6Q9Y3B4 125 aaKnown RBP17.28■□□□□ 0.36
HCFC1R1-209ENST00000576921 TMEM212A6NML5 194 aa17.27■□□□□ 0.36
HCFC1R1-209ENST00000576921 ZFPL1O95159 310 aa17.27■□□□□ 0.36
HCFC1R1-209ENST00000576921 HAND1O96004 215 aa17.27■□□□□ 0.36
HCFC1R1-209ENST00000576921 CCDC159P0C7I6 412 aa17.27■□□□□ 0.36
HCFC1R1-209ENST00000576921 PRKACAP17612 351 aa17.27■□□□□ 0.36
HCFC1R1-209ENST00000576921 ACSM1Q08AH1 577 aa17.27■□□□□ 0.36
HCFC1R1-209ENST00000576921 MRPL28Q13084 256 aaKnown RBP17.27■□□□□ 0.36
HCFC1R1-209ENST00000576921 EDDM3AQ14507 147 aa17.27■□□□□ 0.36
HCFC1R1-209ENST00000576921 HCP5Q6MZN7 132 aa17.27■□□□□ 0.36
HCFC1R1-209ENST00000576921 SHISA2Q6UWI4 295 aa17.27■□□□□ 0.36
HCFC1R1-209ENST00000576921 GDPD3Q7L5L3 318 aa17.27■□□□□ 0.36
HCFC1R1-209ENST00000576921 FAM58AQ8N1B3 248 aa17.27■□□□□ 0.36
HCFC1R1-209ENST00000576921 OR5D18Q8NGL1 313 aa17.27■□□□□ 0.36
HCFC1R1-209ENST00000576921 OR4F5Q8NH21 305 aa17.27■□□□□ 0.36
HCFC1R1-209ENST00000576921 DYRK2Q92630 601 aa17.27■□□□□ 0.36
HCFC1R1-209ENST00000576921 C1RLQ9NZP8 487 aa17.27■□□□□ 0.36
HCFC1R1-209ENST00000576921 DHDHQ9UQ10 334 aa17.27■□□□□ 0.36
HCFC1R1-209ENST00000576921 TRBV2A0A0J9YWF9 115 aa17.26■□□□□ 0.35
HCFC1R1-209ENST00000576921 hCG_1809904A0A1W2PP81 198 aa17.26■□□□□ 0.35
HCFC1R1-209ENST00000576921 A0A1W2PPE2 198 aa17.26■□□□□ 0.35
HCFC1R1-209ENST00000576921 A0A1W2PR64 198 aa17.26■□□□□ 0.35
HCFC1R1-209ENST00000576921 A0A1W2PRV1 198 aa17.26■□□□□ 0.35
HCFC1R1-209ENST00000576921 ZNF737O75373 536 aa17.26■□□□□ 0.35
HCFC1R1-209ENST00000576921 HCKP08631 526 aa17.26■□□□□ 0.35
HCFC1R1-209ENST00000576921 LIMS3P0CW19 117 aa17.26■□□□□ 0.35
HCFC1R1-209ENST00000576921 LIMS4P0CW20 117 aa17.26■□□□□ 0.35
HCFC1R1-209ENST00000576921 GABRR1P24046 479 aa17.26■□□□□ 0.35
HCFC1R1-209ENST00000576921 COX7A1P24310 79 aa17.26■□□□□ 0.35
HCFC1R1-209ENST00000576921 DUSP1P28562 367 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms