RNA–Protein interactions for RNA: ENST00000575830.2

CDC27-218, Transcript of cell division cycle 27, humanhuman

TSL 5

Gene CDC27, Length 397 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-218ENST00000575830 THADAQ6YHU6 1953 aa1.32□□□□□ -2.2
CDC27-218ENST00000575830 UBR2Q8IWV8 1755 aa1.32□□□□□ -2.2
CDC27-218ENST00000575830 IGKV2-24A0A0C4DH68 120 aa1.32□□□□□ -2.2
CDC27-218ENST00000575830 A0A1W2PNN7 141 aa1.32□□□□□ -2.2
CDC27-218ENST00000575830 NCBP2LA6PVI3 153 aaKnown RBP1.32□□□□□ -2.2
CDC27-218ENST00000575830 GABRR3A8MPY1 467 aa1.32□□□□□ -2.2
CDC27-218ENST00000575830 LYRM9A8MSI8 78 aa1.32□□□□□ -2.2
CDC27-218ENST00000575830 BTNL10A8MVZ5 291 aa1.32□□□□□ -2.2
CDC27-218ENST00000575830 WRBO00258 174 aa1.32□□□□□ -2.2
CDC27-218ENST00000575830 SCAMP2O15127 329 aaKnown RBP1.32□□□□□ -2.2
CDC27-218ENST00000575830 CLDN11O75508 207 aa1.32□□□□□ -2.2
CDC27-218ENST00000575830 CD160O95971 181 aa1.32□□□□□ -2.2
CDC27-218ENST00000575830 CRYGCP07315 174 aa1.32□□□□□ -2.2
CDC27-218ENST00000575830 ERCC1P07992 297 aaPredicted RBP1.32□□□□□ -2.2
CDC27-218ENST00000575830 STAG3L3P0CL85 134 aa1.32□□□□□ -2.2
CDC27-218ENST00000575830 CD99P14209 185 aa1.32□□□□□ -2.2
CDC27-218ENST00000575830 SRMP19623 302 aa1.32□□□□□ -2.2
CDC27-218ENST00000575830 GSTM3P21266 225 aa1.32□□□□□ -2.2
CDC27-218ENST00000575830 PRLHRP49683 370 aa1.32□□□□□ -2.2
CDC27-218ENST00000575830 CRISP1P54107 249 aa1.32□□□□□ -2.2
CDC27-218ENST00000575830 CDKN2DP55273 166 aa1.32□□□□□ -2.2
CDC27-218ENST00000575830 RGS8P57771 180 aaPredicted RBP1.32□□□□□ -2.2
CDC27-218ENST00000575830 RPL23P62829 140 aaKnown RBP1.32□□□□□ -2.2
CDC27-218ENST00000575830 IFT88Q13099 833 aa1.32□□□□□ -2.2
CDC27-218ENST00000575830 NKAIN1Q4KMZ8 207 aa1.32□□□□□ -2.2
CDC27-218ENST00000575830 PIP5KL1Q5T9C9 394 aa1.32□□□□□ -2.2
CDC27-218ENST00000575830 C9orf135Q5VTT2 229 aa1.32□□□□□ -2.2
CDC27-218ENST00000575830 STUMQ69YW2 141 aa1.32□□□□□ -2.2
CDC27-218ENST00000575830 SSX9Q7RTT3 188 aa1.32□□□□□ -2.2
CDC27-218ENST00000575830 SLC16A14Q7RTX9 510 aa1.32□□□□□ -2.2
CDC27-218ENST00000575830 APRG1Q8IVJ8 170 aa1.32□□□□□ -2.2
CDC27-218ENST00000575830 CHST4Q8NCG5 386 aa1.32□□□□□ -2.2
CDC27-218ENST00000575830 BPIFCQ8NFQ6 507 aa1.32□□□□□ -2.2
CDC27-218ENST00000575830 OR11H7Q8NGC8 314 aa1.32□□□□□ -2.2
CDC27-218ENST00000575830 OR56A4Q8NGH8 313 aa1.32□□□□□ -2.2
CDC27-218ENST00000575830 OR4A4PQ8NGN8 299 aa1.32□□□□□ -2.2
CDC27-218ENST00000575830 TMEM230Q96A57 120 aa1.32□□□□□ -2.2
CDC27-218ENST00000575830 ISG20Q96AZ6 181 aaKnown RBP1.32□□□□□ -2.2
CDC27-218ENST00000575830 GLT1D1Q96MS3 346 aa1.32□□□□□ -2.2
CDC27-218ENST00000575830 C18orf15Q96N68 181 aa1.32□□□□□ -2.2
CDC27-218ENST00000575830 PRSS16Q9NQE7 514 aa1.32□□□□□ -2.2
CDC27-218ENST00000575830 C20orf96Q9NUD7 363 aaPredicted RBP1.32□□□□□ -2.2
CDC27-218ENST00000575830 LYARQ9NX58 379 aaKnown RBP1.32□□□□□ -2.2
CDC27-218ENST00000575830 ZNF586Q9NXT0 402 aa1.32□□□□□ -2.2
CDC27-218ENST00000575830 ZNF391Q9UJN7 358 aa1.32□□□□□ -2.2
CDC27-218ENST00000575830 PTPRFP10586 1907 aa1.32□□□□□ -2.2
CDC27-218ENST00000575830 KMT2AQ03164 3969 aa1.32□□□□□ -2.2
CDC27-218ENST00000575830 ANKRD36CQ5JPF3 1778 aa1.31□□□□□ -2.2
CDC27-218ENST00000575830 DOCK2Q92608 1830 aa1.31□□□□□ -2.2
CDC27-218ENST00000575830 MIA3Q5JRA6 1907 aa1.31□□□□□ -2.2
CDC27-218ENST00000575830 IGHV1-3A0A0C4DH29 117 aa1.31□□□□□ -2.2
CDC27-218ENST00000575830 A0A1B0GUH1 482 aa1.31□□□□□ -2.2
CDC27-218ENST00000575830 OR5H1A6NKK0 313 aa1.31□□□□□ -2.2
CDC27-218ENST00000575830 PDZK1P1A8MUH7 402 aa1.31□□□□□ -2.2
CDC27-218ENST00000575830 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP1.31□□□□□ -2.2
CDC27-218ENST00000575830 TNFRSF11BO00300 401 aa1.31□□□□□ -2.2
CDC27-218ENST00000575830 TAAR5O14804 337 aa1.31□□□□□ -2.2
CDC27-218ENST00000575830 ERI3O43414 337 aaKnown RBP1.31□□□□□ -2.2
CDC27-218ENST00000575830 FKBP6O75344 327 aa1.31□□□□□ -2.2
CDC27-218ENST00000575830 SNAI1O95863 264 aaPredicted RBP1.31□□□□□ -2.2
CDC27-218ENST00000575830 EIF4EP06730 217 aaKnown RBP1.31□□□□□ -2.2
CDC27-218ENST00000575830 ANXA5P08758 320 aa1.31□□□□□ -2.2
CDC27-218ENST00000575830 HOXB8P17481 243 aaPredicted RBP1.31□□□□□ -2.2
CDC27-218ENST00000575830 TNNI1P19237 187 aa1.31□□□□□ -2.2
CDC27-218ENST00000575830 U2AF2P26368 475 aaKnown RBP eCLIP1.31□□□□□ -2.22e-6■■■■■ 28.2
CDC27-218ENST00000575830 PSMB5P28074 263 aa1.31□□□□□ -2.2
CDC27-218ENST00000575830 POLR2IP36954 125 aaKnown RBP1.31□□□□□ -2.2
CDC27-218ENST00000575830 PEX19P40855 299 aa1.31□□□□□ -2.2
CDC27-218ENST00000575830 SLC1A1P43005 524 aa1.31□□□□□ -2.2
CDC27-218ENST00000575830 MRPL19P49406 292 aaKnown RBP1.31□□□□□ -2.2
CDC27-218ENST00000575830 DAOAP59103 153 aa1.31□□□□□ -2.2
CDC27-218ENST00000575830 EIF3EP60228 445 aaKnown RBP1.31□□□□□ -2.2
CDC27-218ENST00000575830 STXBP1P61764 594 aaKnown RBP1.31□□□□□ -2.2
CDC27-218ENST00000575830 HIKESHIQ53FT3 197 aa1.31□□□□□ -2.2
CDC27-218ENST00000575830 TMEM136Q6ZRR5 245 aa1.31□□□□□ -2.2
CDC27-218ENST00000575830 OTUD6AQ7L8S5 288 aa1.31□□□□□ -2.2
CDC27-218ENST00000575830 FAM122BQ7Z309 247 aa1.31□□□□□ -2.2
CDC27-218ENST00000575830 NT5DC3Q86UY8 548 aa1.31□□□□□ -2.2
CDC27-218ENST00000575830 CBLN2Q8IUK8 224 aa1.31□□□□□ -2.2
CDC27-218ENST00000575830 OR52E2Q8NGJ4 325 aa1.31□□□□□ -2.2
CDC27-218ENST00000575830 OR9G4Q8NGQ1 327 aa1.31□□□□□ -2.2
CDC27-218ENST00000575830 OR52E5Q8NH55 327 aa1.31□□□□□ -2.2
CDC27-218ENST00000575830 OR10G6Q8NH81 332 aa1.31□□□□□ -2.2
CDC27-218ENST00000575830 ZNF75CPQ92670 426 aaPredicted RBP1.31□□□□□ -2.2
CDC27-218ENST00000575830 OPALINQ96PE5 141 aa1.31□□□□□ -2.2
CDC27-218ENST00000575830 OR5B12Q96R08 314 aa1.31□□□□□ -2.2
CDC27-218ENST00000575830 EDA2RQ9HAV5 297 aa1.31□□□□□ -2.2
CDC27-218ENST00000575830 HRASLS2Q9NWW9 162 aa1.31□□□□□ -2.2
CDC27-218ENST00000575830 C21orf62Q9NYP8 219 aa1.31□□□□□ -2.2
CDC27-218ENST00000575830 AHSPQ9NZD4 102 aa1.31□□□□□ -2.2
CDC27-218ENST00000575830 UXTQ9UBK9 157 aaPredicted RBP1.31□□□□□ -2.2
CDC27-218ENST00000575830 FAT4Q6V0I7 4981 aa1.31□□□□□ -2.2
CDC27-218ENST00000575830 RNF213Q63HN8 5207 aa1.3□□□□□ -2.2
CDC27-218ENST00000575830 TRAV19A0A0A6YYK7 116 aa1.3□□□□□ -2.2
CDC27-218ENST00000575830 SMCO3A2RU48 225 aa1.3□□□□□ -2.2
CDC27-218ENST00000575830 GOLGA8TH3BQL2 631 aa1.3□□□□□ -2.2
CDC27-218ENST00000575830 TEX46H3BTG2 121 aa1.3□□□□□ -2.2
CDC27-218ENST00000575830 HUS1O60921 280 aa1.3□□□□□ -2.2
CDC27-218ENST00000575830 CYB5R3P00387 301 aaPredicted RBP1.3□□□□□ -2.2
CDC27-218ENST00000575830 PAHP00439 452 aa1.3□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms