RNA–Protein interactions for RNA: ENST00000573584.5

NUP88-207, Transcript of nucleoporin 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP88, Length 2,916 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-207ENST00000573584 IGKV1-27A0A075B6S5 117 aa13.6□□□□□ -0.23
NUP88-207ENST00000573584 FAM221AA4D161 298 aa13.6□□□□□ -0.23
NUP88-207ENST00000573584 C1QL1O75973 258 aa13.6□□□□□ -0.23
NUP88-207ENST00000573584 DAOP14920 347 aa13.6□□□□□ -0.23
NUP88-207ENST00000573584 PNLIPP16233 465 aa13.6□□□□□ -0.23
NUP88-207ENST00000573584 UCP2P55851 309 aa13.6□□□□□ -0.23
NUP88-207ENST00000573584 TGIF1Q15583 401 aa13.6□□□□□ -0.23
NUP88-207ENST00000573584 KRBOX4Q5JUW0 171 aa13.6□□□□□ -0.23
NUP88-207ENST00000573584 NAXEQ8NCW5 288 aa13.6□□□□□ -0.23
NUP88-207ENST00000573584 OR5L1Q8NGL2 311 aa13.6□□□□□ -0.23
NUP88-207ENST00000573584 MARS2Q96GW9 593 aaKnown RBP13.6□□□□□ -0.23
NUP88-207ENST00000573584 SUCNR1Q9BXA5 334 aa13.6□□□□□ -0.23
NUP88-207ENST00000573584 SLC2A9Q9NRM0 540 aa13.6□□□□□ -0.23
NUP88-207ENST00000573584 A0A087WZY1 265 aa13.6□□□□□ -0.23
NUP88-207ENST00000573584 H7C1Q1 480 aa13.6□□□□□ -0.23
NUP88-207ENST00000573584 LIAT1Q6ZQX7 453 aa13.6□□□□□ -0.23
NUP88-207ENST00000573584 MAML2Q8IZL2 1156 aaPredicted RBP13.6□□□□□ -0.23
NUP88-207ENST00000573584 OR52M1Q8NGK5 317 aa13.6□□□□□ -0.23
NUP88-207ENST00000573584 NANPQ8TBE9 248 aa13.6□□□□□ -0.23
NUP88-207ENST00000573584 SH3BGRL3Q9H299 93 aa13.6□□□□□ -0.23
NUP88-207ENST00000573584 C19orf12Q9NSK7 152 aa13.6□□□□□ -0.23
NUP88-207ENST00000573584 GEMIN2O14893 280 aaKnown RBP13.6□□□□□ -0.23
NUP88-207ENST00000573584 GLAP06280 429 aa13.6□□□□□ -0.23
NUP88-207ENST00000573584 CELA2AP08217 269 aa13.6□□□□□ -0.23
NUP88-207ENST00000573584 CHATP28329 748 aa13.6□□□□□ -0.23
NUP88-207ENST00000573584 DUSP1P28562 367 aa13.6□□□□□ -0.23
NUP88-207ENST00000573584 GUSBP11Q6P575 273 aa13.6□□□□□ -0.23
NUP88-207ENST00000573584 FBXW12Q6X9E4 464 aa13.6□□□□□ -0.23
NUP88-207ENST00000573584 LRTM2Q8N967 370 aa13.6□□□□□ -0.23
NUP88-207ENST00000573584 HSD17B11Q8NBQ5 300 aa13.6□□□□□ -0.23
NUP88-207ENST00000573584 C18orf12Q96KH6 178 aa13.6□□□□□ -0.23
NUP88-207ENST00000573584 A0A1W2PQM1 296 aa13.59□□□□□ -0.23
NUP88-207ENST00000573584 A6NLC8 198 aa13.59□□□□□ -0.23
NUP88-207ENST00000573584 ST8SIA3O43173 380 aa13.59□□□□□ -0.23
NUP88-207ENST00000573584 RBP2P50120 134 aa13.59□□□□□ -0.23
NUP88-207ENST00000573584 NHLH2Q02577 135 aa13.59□□□□□ -0.23
NUP88-207ENST00000573584 FAM27BQ5VT28 67 aa13.59□□□□□ -0.23
NUP88-207ENST00000573584 SLC22A25Q6T423 547 aa13.59□□□□□ -0.23
NUP88-207ENST00000573584 RBMS3Q6XE24 437 aaKnown RBP13.59□□□□□ -0.23
NUP88-207ENST00000573584 DNASE2BQ8WZ79 361 aa13.59□□□□□ -0.23
NUP88-207ENST00000573584 BORCS8Q96FH0 119 aa13.59□□□□□ -0.23
NUP88-207ENST00000573584 JSRP1Q96MG2 331 aaPredicted RBP13.59□□□□□ -0.23
NUP88-207ENST00000573584 TUBA4BQ9H853 241 aa13.59□□□□□ -0.23
NUP88-207ENST00000573584 FOXD3Q9UJU5 478 aaPredicted RBP13.59□□□□□ -0.23
NUP88-207ENST00000573584 WDFY3Q8IZQ1 3526 aa13.59□□□□□ -0.23
NUP88-207ENST00000573584 CCDC187A0A096LP49 1063 aa13.59□□□□□ -0.23
NUP88-207ENST00000573584 G3V3Y1 287 aa13.59□□□□□ -0.23
NUP88-207ENST00000573584 SGCEO43556 437 aa13.59□□□□□ -0.23
NUP88-207ENST00000573584 S100A9P06702 114 aaKnown RBP13.59□□□□□ -0.23
NUP88-207ENST00000573584 ZNF806P0C7X5 589 aa13.59□□□□□ -0.23
NUP88-207ENST00000573584 AGAP20933 346 aa13.59□□□□□ -0.23
NUP88-207ENST00000573584 SUCLG1P53597 346 aaKnown RBP13.59□□□□□ -0.23
NUP88-207ENST00000573584 CNN3Q15417 329 aaKnown RBP13.59□□□□□ -0.23
NUP88-207ENST00000573584 PIGYQ3MUY2 71 aa13.59□□□□□ -0.23
NUP88-207ENST00000573584 PPP1R3BQ86XI6 285 aa13.59□□□□□ -0.23
NUP88-207ENST00000573584 LGI3Q8N145 548 aa13.59□□□□□ -0.23
NUP88-207ENST00000573584 ZIC4Q8N9L1 334 aa13.59□□□□□ -0.23
NUP88-207ENST00000573584 KDF1Q8NAX2 398 aaPredicted RBP13.59□□□□□ -0.23
NUP88-207ENST00000573584 OR10AD1Q8NGE0 317 aa13.59□□□□□ -0.23
NUP88-207ENST00000573584 MSI2Q96DH6 328 aaKnown RBP13.59□□□□□ -0.23
NUP88-207ENST00000573584 SYT3Q9BQG1 590 aa13.59□□□□□ -0.23
NUP88-207ENST00000573584 ANGPTL4Q9BY76 406 aa13.59□□□□□ -0.23
NUP88-207ENST00000573584 ZDHHC8Q9ULC8 765 aa13.59□□□□□ -0.23
NUP88-207ENST00000573584 IGHV5-10-1A0A0J9YXX1 117 aa13.58□□□□□ -0.24
NUP88-207ENST00000573584 A0A1W2PPH5 198 aa13.58□□□□□ -0.24
NUP88-207ENST00000573584 MED19A0JLT2 244 aaPredicted RBP13.58□□□□□ -0.24
NUP88-207ENST00000573584 UMAD1C9J7I0 102 aa13.58□□□□□ -0.24
NUP88-207ENST00000573584 UBE2CO00762 179 aa13.58□□□□□ -0.24
NUP88-207ENST00000573584 LCATP04180 440 aa13.58□□□□□ -0.24
NUP88-207ENST00000573584 GLP1RP43220 463 aa13.58□□□□□ -0.24
NUP88-207ENST00000573584 RAB5CP51148 216 aa13.58□□□□□ -0.24
NUP88-207ENST00000573584 CCL7P80098 99 aa13.58□□□□□ -0.24
NUP88-207ENST00000573584 MRPS34P82930 218 aaKnown RBP13.58□□□□□ -0.24
NUP88-207ENST00000573584 ZC3HAV1Q7Z2W4 902 aaKnown RBP13.58□□□□□ -0.24
NUP88-207ENST00000573584 OR11L1Q8NGX0 322 aa13.58□□□□□ -0.24
NUP88-207ENST00000573584 NSG1A0A0A6YYJ2 146 aa13.58□□□□□ -0.24
NUP88-207ENST00000573584 S100A8P05109 93 aa13.58□□□□□ -0.24
NUP88-207ENST00000573584 ZNF14P17017 642 aaPredicted RBP13.58□□□□□ -0.24
NUP88-207ENST00000573584 CRYGSP22914 178 aa13.58□□□□□ -0.24
NUP88-207ENST00000573584 IL13RA2Q14627 380 aa13.58□□□□□ -0.24
NUP88-207ENST00000573584 ZNF774Q6NX45 483 aa13.58□□□□□ -0.24
NUP88-207ENST00000573584 SLC16A13Q7RTY0 426 aa13.58□□□□□ -0.24
NUP88-207ENST00000573584 FBXL14Q8N1E6 418 aa13.58□□□□□ -0.24
NUP88-207ENST00000573584 CD300LFQ8TDQ1 290 aa13.58□□□□□ -0.24
NUP88-207ENST00000573584 INTS12Q96CB8 462 aaKnown RBP13.58□□□□□ -0.24
NUP88-207ENST00000573584 FBXO7Q9Y3I1 522 aa13.58□□□□□ -0.24
NUP88-207ENST00000573584 A0A1W2PPE3 182 aa13.57□□□□□ -0.24
NUP88-207ENST00000573584 LINC01387J3KSC0 135 aa13.57□□□□□ -0.24
NUP88-207ENST00000573584 PHF1O43189 567 aaPredicted RBP13.57□□□□□ -0.24
NUP88-207ENST00000573584 ZIC3O60481 467 aa13.57□□□□□ -0.24
NUP88-207ENST00000573584 ONECUT2O95948 504 aa13.57□□□□□ -0.24
NUP88-207ENST00000573584 CCL3P10147 92 aa13.57□□□□□ -0.24
NUP88-207ENST00000573584 TAAR9Q96RI9 348 aa13.57□□□□□ -0.24
NUP88-207ENST00000573584 KCNJ16Q9NPI9 418 aa13.57□□□□□ -0.24
NUP88-207ENST00000573584 STRAPQ9Y3F4 350 aaKnown RBP13.57□□□□□ -0.24
NUP88-207ENST00000573584 A0A1B0GV50 99 aa13.57□□□□□ -0.24
NUP88-207ENST00000573584 CCDC85CA6NKD9 419 aa13.57□□□□□ -0.24
NUP88-207ENST00000573584 TNFSF11O14788 317 aa13.57□□□□□ -0.24
NUP88-207ENST00000573584 SMIM6P0DI80 62 aa13.57□□□□□ -0.24
NUP88-207ENST00000573584 RAB35Q15286 201 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms