RNA–Protein interactions for RNA: ENST00000572365.1

SF3B3-214, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-214ENST00000572365 RAB1BQ9H0U4 201 aa4.37□□□□□ -1.71
SF3B3-214ENST00000572365 ZNF385DQ9H6B1 395 aa4.37□□□□□ -1.71
SF3B3-214ENST00000572365 MID1IP1Q9NPA3 183 aa4.37□□□□□ -1.71
SF3B3-214ENST00000572365 ZNF275Q9NSD4 429 aaPredicted RBP4.37□□□□□ -1.71
SF3B3-214ENST00000572365 OPN4Q9UHM6 478 aa4.37□□□□□ -1.71
SF3B3-214ENST00000572365 AURKCQ9UQB9 309 aa4.37□□□□□ -1.71
SF3B3-214ENST00000572365 HSPB11Q9Y547 144 aa4.37□□□□□ -1.71
SF3B3-214ENST00000572365 IGHV4-4A0A075B6R2 117 aa4.36□□□□□ -1.71
SF3B3-214ENST00000572365 A0A0G2JMP0 313 aa4.36□□□□□ -1.71
SF3B3-214ENST00000572365 TMEM129A0AVI4 362 aa4.36□□□□□ -1.71
SF3B3-214ENST00000572365 SMIM30A4D0T7 59 aa4.36□□□□□ -1.71
SF3B3-214ENST00000572365 TRAPPC13A5PLN9 417 aa4.36□□□□□ -1.71
SF3B3-214ENST00000572365 ZNF729A6NN14 1252 aaPredicted RBP4.36□□□□□ -1.71
SF3B3-214ENST00000572365 ERI2A8K979 691 aaKnown RBP4.36□□□□□ -1.71
SF3B3-214ENST00000572365 G3V2T6 193 aa4.36□□□□□ -1.71
SF3B3-214ENST00000572365 EI24O14681 340 aa4.36□□□□□ -1.71
SF3B3-214ENST00000572365 FADS1O60427 444 aa4.36□□□□□ -1.71
SF3B3-214ENST00000572365 KERAO60938 352 aa4.36□□□□□ -1.71
SF3B3-214ENST00000572365 SCN2BO60939 215 aa4.36□□□□□ -1.71
SF3B3-214ENST00000572365 CRCPO75575 148 aa4.36□□□□□ -1.71
SF3B3-214ENST00000572365 SBK2P0C263 348 aa4.36□□□□□ -1.71
SF3B3-214ENST00000572365 ADORA3P0DMS8 318 aa4.36□□□□□ -1.71
SF3B3-214ENST00000572365 CT45A8P0DMV1 189 aa4.36□□□□□ -1.71
SF3B3-214ENST00000572365 CT45A9P0DMV2 189 aa4.36□□□□□ -1.71
SF3B3-214ENST00000572365 PRG2P13727 222 aa4.36□□□□□ -1.71
SF3B3-214ENST00000572365 SELEP16581 610 aa4.36□□□□□ -1.71
SF3B3-214ENST00000572365 CD36P16671 472 aa4.36□□□□□ -1.71
SF3B3-214ENST00000572365 SPI1P17947 270 aa4.36□□□□□ -1.71
SF3B3-214ENST00000572365 DRD5P21918 477 aa4.36□□□□□ -1.71
SF3B3-214ENST00000572365 PSMB9P28065 219 aa4.36□□□□□ -1.71
SF3B3-214ENST00000572365 PPICP45877 212 aa4.36□□□□□ -1.71
SF3B3-214ENST00000572365 GPR6P46095 362 aaPredicted RBP4.36□□□□□ -1.71
SF3B3-214ENST00000572365 OR3A2P47893 321 aa4.36□□□□□ -1.71
SF3B3-214ENST00000572365 MRPL19P49406 292 aaKnown RBP4.36□□□□□ -1.71
SF3B3-214ENST00000572365 RORCP51449 518 aa4.36□□□□□ -1.71
SF3B3-214ENST00000572365 PKNOX1P55347 436 aa4.36□□□□□ -1.71
SF3B3-214ENST00000572365 RAG2P55895 527 aa4.36□□□□□ -1.71
SF3B3-214ENST00000572365 RAB10P61026 200 aa4.36□□□□□ -1.71
SF3B3-214ENST00000572365 LCN2P80188 198 aa4.36□□□□□ -1.71
SF3B3-214ENST00000572365 IRF8Q02556 426 aa4.36□□□□□ -1.71
SF3B3-214ENST00000572365 EMX1Q04741 257 aaPredicted RBP4.36□□□□□ -1.71
SF3B3-214ENST00000572365 SRSF9Q13242 221 aaKnown RBP eCLIP4.36□□□□□ -1.71
SF3B3-214ENST00000572365 SCGB2A2Q13296 93 aa4.36□□□□□ -1.71
SF3B3-214ENST00000572365 BTN1A1Q13410 526 aa4.36□□□□□ -1.71
SF3B3-214ENST00000572365 AQP6Q13520 282 aa4.36□□□□□ -1.71
SF3B3-214ENST00000572365 SMCO1Q147U7 214 aa4.36□□□□□ -1.71
SF3B3-214ENST00000572365 LASP1Q14847 261 aaKnown RBP4.36□□□□□ -1.71
SF3B3-214ENST00000572365 TSNQ15631 228 aaKnown RBP4.36□□□□□ -1.71
SF3B3-214ENST00000572365 ZNF74Q16587 644 aa4.36□□□□□ -1.71
SF3B3-214ENST00000572365 TAF9Q16594 264 aa4.36□□□□□ -1.71
SF3B3-214ENST00000572365 CYP51A1Q16850 503 aa4.36□□□□□ -1.71
SF3B3-214ENST00000572365 ALKBH6Q3KRA9 238 aa4.36□□□□□ -1.71
SF3B3-214ENST00000572365 AARDQ4LEZ3 155 aa4.36□□□□□ -1.71
SF3B3-214ENST00000572365 CT45A2Q5DJT8 189 aa4.36□□□□□ -1.71
SF3B3-214ENST00000572365 ZNF691Q5VV52 312 aa4.36□□□□□ -1.71
SF3B3-214ENST00000572365 REP15Q6BDI9 236 aa4.36□□□□□ -1.71
SF3B3-214ENST00000572365 SLC27A4Q6P1M0 643 aa4.36□□□□□ -1.71
SF3B3-214ENST00000572365 ERICH5Q6P6B1 374 aa4.36□□□□□ -1.71
SF3B3-214ENST00000572365 TMPRSS11AQ6ZMR5 421 aa4.36□□□□□ -1.71
SF3B3-214ENST00000572365 Q6ZT83 130 aa4.36□□□□□ -1.71
SF3B3-214ENST00000572365 RASSF6Q6ZTQ3 369 aa4.36□□□□□ -1.71
SF3B3-214ENST00000572365 LRRC70Q7Z2Q7 622 aa4.36□□□□□ -1.71
SF3B3-214ENST00000572365 TMEM17Q86X19 198 aa4.36□□□□□ -1.71
SF3B3-214ENST00000572365 SLC22A9Q8IVM8 553 aa4.36□□□□□ -1.71
SF3B3-214ENST00000572365 LYG1Q8N1E2 194 aa4.36□□□□□ -1.71
SF3B3-214ENST00000572365 YIPF7Q8N8F6 280 aa4.36□□□□□ -1.71
SF3B3-214ENST00000572365 OR5AP2Q8NGF4 316 aa4.36□□□□□ -1.71
SF3B3-214ENST00000572365 OR4C15Q8NGM1 316 aa4.36□□□□□ -1.71
SF3B3-214ENST00000572365 OR10G8Q8NGN5 311 aa4.36□□□□□ -1.71
SF3B3-214ENST00000572365 OR5K1Q8NHB7 308 aa4.36□□□□□ -1.71
SF3B3-214ENST00000572365 GATAD1Q8WUU5 269 aa4.36□□□□□ -1.71
SF3B3-214ENST00000572365 ASB13Q8WXK3 278 aa4.36□□□□□ -1.71
SF3B3-214ENST00000572365 RFT1Q96AA3 541 aa4.36□□□□□ -1.71
SF3B3-214ENST00000572365 SLCO4A1Q96BD0 722 aa4.36□□□□□ -1.71
SF3B3-214ENST00000572365 CITED1Q99966 193 aa4.36□□□□□ -1.71
SF3B3-214ENST00000572365 SAV1Q9H4B6 383 aaPredicted RBP4.36□□□□□ -1.71
SF3B3-214ENST00000572365 DUSP21Q9H596 190 aa4.36□□□□□ -1.71
SF3B3-214ENST00000572365 ELOVL6Q9H5J4 265 aa4.36□□□□□ -1.71
SF3B3-214ENST00000572365 C5orf66Q9H5L9 145 aa4.36□□□□□ -1.71
SF3B3-214ENST00000572365 EGLN3Q9H6Z9 239 aa4.36□□□□□ -1.71
SF3B3-214ENST00000572365 PTGES2Q9H7Z7 377 aa4.36□□□□□ -1.71
SF3B3-214ENST00000572365 C19orf12Q9NSK7 152 aa4.36□□□□□ -1.71
SF3B3-214ENST00000572365 PLCXD1Q9NUJ7 323 aa4.36□□□□□ -1.71
SF3B3-214ENST00000572365 COA4Q9NYJ1 87 aa4.36□□□□□ -1.71
SF3B3-214ENST00000572365 TAS2R13Q9NYV9 303 aa4.36□□□□□ -1.71
SF3B3-214ENST00000572365 OPTCQ9UBM4 332 aa4.36□□□□□ -1.71
SF3B3-214ENST00000572365 PURGQ9UJV8 347 aaKnown RBP4.36□□□□□ -1.71
SF3B3-214ENST00000572365 FZR1Q9UM11 496 aa4.36□□□□□ -1.71
SF3B3-214ENST00000572365 ACOT9Q9Y305 439 aa4.36□□□□□ -1.71
SF3B3-214ENST00000572365 OR10H1Q9Y4A9 318 aa4.36□□□□□ -1.71
SF3B3-214ENST00000572365 LOC100130705A0A1B0GUX0 176 aa4.35□□□□□ -1.71
SF3B3-214ENST00000572365 NR5A2O00482 541 aa4.35□□□□□ -1.71
SF3B3-214ENST00000572365 GNGT2O14610 69 aa4.35□□□□□ -1.71
SF3B3-214ENST00000572365 SGCEO43556 437 aa4.35□□□□□ -1.71
SF3B3-214ENST00000572365 MPZL2O60487 215 aa4.35□□□□□ -1.71
SF3B3-214ENST00000572365 EIF1BO60739 113 aaKnown RBP4.35□□□□□ -1.71
SF3B3-214ENST00000572365 LGI1O95970 557 aa4.35□□□□□ -1.71
SF3B3-214ENST00000572365 KLK1P06870 262 aa4.35□□□□□ -1.71
SF3B3-214ENST00000572365 GNAO1P09471 354 aa4.35□□□□□ -1.71
SF3B3-214ENST00000572365 SLC2A2P11168 524 aaPredicted RBP4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms