RNA–Protein interactions for RNA: ENST00000570758.1

CHD3-212, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 174 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-212ENST00000570758 KRTAP10-3P60369 221 aa4.41□□□□□ -1.7
CHD3-212ENST00000570758 ACTA2P62736 377 aa4.41□□□□□ -1.7
CHD3-212ENST00000570758 RPL31P62899 125 aaKnown RBP4.41□□□□□ -1.7
CHD3-212ENST00000570758 ACTG2P63267 376 aa4.41□□□□□ -1.7
CHD3-212ENST00000570758 GUCA2AQ02747 115 aa4.41□□□□□ -1.7
CHD3-212ENST00000570758 ALKBH1Q13686 389 aaKnown RBP4.41□□□□□ -1.7
CHD3-212ENST00000570758 BLMHQ13867 455 aa4.41□□□□□ -1.7
CHD3-212ENST00000570758 GALEQ14376 348 aa4.41□□□□□ -1.7
CHD3-212ENST00000570758 CNN3Q15417 329 aaKnown RBP4.41□□□□□ -1.7
CHD3-212ENST00000570758 SMN1Q16637 294 aaKnown RBP4.41□□□□□ -1.7
CHD3-212ENST00000570758 TMEM244Q5VVB8 128 aa4.41□□□□□ -1.7
CHD3-212ENST00000570758 LPCAT4Q643R3 524 aa4.41□□□□□ -1.7
CHD3-212ENST00000570758 NCR3LG1Q68D85 454 aa4.41□□□□□ -1.7
CHD3-212ENST00000570758 CRIP3Q6Q6R5 217 aa4.41□□□□□ -1.7
CHD3-212ENST00000570758 SHISA2Q6UWI4 295 aa4.41□□□□□ -1.7
CHD3-212ENST00000570758 UTS2BQ765I0 119 aa4.41□□□□□ -1.7
CHD3-212ENST00000570758 TCF23Q7RTU1 214 aa4.41□□□□□ -1.7
CHD3-212ENST00000570758 KCTD20Q7Z5Y7 419 aa4.41□□□□□ -1.7
CHD3-212ENST00000570758 EGFL6Q8IUX8 553 aa4.41□□□□□ -1.7
CHD3-212ENST00000570758 C10orf67Q8IYJ2 551 aa4.41□□□□□ -1.7
CHD3-212ENST00000570758 SYS1Q8N2H4 156 aa4.41□□□□□ -1.7
CHD3-212ENST00000570758 DNAAF1Q8NEP3 725 aa4.41□□□□□ -1.7
CHD3-212ENST00000570758 OR52N4Q8NGI2 321 aa4.41□□□□□ -1.7
CHD3-212ENST00000570758 OR13C3Q8NGS6 347 aa4.41□□□□□ -1.7
CHD3-212ENST00000570758 OR4F5Q8NH21 305 aa4.41□□□□□ -1.7
CHD3-212ENST00000570758 SGMS2Q8NHU3 365 aa4.41□□□□□ -1.7
CHD3-212ENST00000570758 TBC1D15Q8TC07 691 aa4.41□□□□□ -1.7
CHD3-212ENST00000570758 PP6455Q8WZ26 134 aa4.41□□□□□ -1.7
CHD3-212ENST00000570758 RFT1Q96AA3 541 aa4.41□□□□□ -1.7
CHD3-212ENST00000570758 BORCS8Q96FH0 119 aa4.41□□□□□ -1.7
CHD3-212ENST00000570758 SPACA5Q96QH8 159 aa4.41□□□□□ -1.7
CHD3-212ENST00000570758 METTL8Q9H825 291 aaKnown RBP4.41□□□□□ -1.7
CHD3-212ENST00000570758 MRPS18AQ9NVS2 196 aaKnown RBP4.41□□□□□ -1.7
CHD3-212ENST00000570758 RBFOX1Q9NWB1 397 aaKnown RBP4.41□□□□□ -1.7
CHD3-212ENST00000570758 ERVK13-1Q9NX77 482 aa4.41□□□□□ -1.7
CHD3-212ENST00000570758 ZKSCAN7Q9P0L1 754 aaPredicted RBP4.41□□□□□ -1.7
CHD3-212ENST00000570758 ZNRD1Q9P1U0 126 aa4.41□□□□□ -1.7
CHD3-212ENST00000570758 HHLA2Q9UM44 414 aa4.41□□□□□ -1.7
CHD3-212ENST00000570758 FAM96BQ9Y3D0 163 aa4.41□□□□□ -1.7
CHD3-212ENST00000570758 MMP24Q9Y5R2 645 aa4.41□□□□□ -1.7
CHD3-212ENST00000570758 POMT1Q9Y6A1 747 aa4.41□□□□□ -1.7
CHD3-212ENST00000570758 CMYA5Q8N3K9 4069 aa4.41□□□□□ -1.7
CHD3-212ENST00000570758 SNTNA6NMZ2 147 aa4.4□□□□□ -1.71
CHD3-212ENST00000570758 POM121CA8CG34 1229 aa4.4□□□□□ -1.71
CHD3-212ENST00000570758 C17orf98A8MV24 154 aa4.4□□□□□ -1.71
CHD3-212ENST00000570758 SPRY1O43609 319 aaPredicted RBP4.4□□□□□ -1.71
CHD3-212ENST00000570758 MPZL2O60487 215 aa4.4□□□□□ -1.71
CHD3-212ENST00000570758 PSPNO60542 156 aa4.4□□□□□ -1.71
CHD3-212ENST00000570758 ZFPL1O95159 310 aa4.4□□□□□ -1.71
CHD3-212ENST00000570758 CLIC3O95833 236 aa4.4□□□□□ -1.71
CHD3-212ENST00000570758 FADS2O95864 444 aaKnown RBP4.4□□□□□ -1.71
CHD3-212ENST00000570758 HAND1O96004 215 aa4.4□□□□□ -1.71
CHD3-212ENST00000570758 MT-ND2P03891 347 aa4.4□□□□□ -1.71
CHD3-212ENST00000570758 CHRM2P08172 466 aa4.4□□□□□ -1.71
CHD3-212ENST00000570758 LIMS3P0CW19 117 aa4.4□□□□□ -1.71
CHD3-212ENST00000570758 LIMS4P0CW20 117 aa4.4□□□□□ -1.71
CHD3-212ENST00000570758 PRKACAP17612 351 aa4.4□□□□□ -1.71
CHD3-212ENST00000570758 PRKACBP22694 351 aa4.4□□□□□ -1.71
CHD3-212ENST00000570758 PEX2P28328 305 aa4.4□□□□□ -1.71
CHD3-212ENST00000570758 RBP2P50120 134 aa4.4□□□□□ -1.71
CHD3-212ENST00000570758 ETV1P50549 477 aa4.4□□□□□ -1.71
CHD3-212ENST00000570758 GTF2A1P52655 376 aaPredicted RBP4.4□□□□□ -1.71
CHD3-212ENST00000570758 GBX2P52951 348 aaPredicted RBP4.4□□□□□ -1.71
CHD3-212ENST00000570758 ATP1B3P54709 279 aa4.4□□□□□ -1.71
CHD3-212ENST00000570758 SNU13P55769 128 aaKnown RBP4.4□□□□□ -1.71
CHD3-212ENST00000570758 MTCP1P56278 107 aa4.4□□□□□ -1.71
CHD3-212ENST00000570758 ACSM1Q08AH1 577 aa4.4□□□□□ -1.71
CHD3-212ENST00000570758 RAB40BQ12829 278 aa4.4□□□□□ -1.71
CHD3-212ENST00000570758 PDZK1IP1Q13113 114 aa4.4□□□□□ -1.71
CHD3-212ENST00000570758 EDDM3AQ14507 147 aa4.4□□□□□ -1.71
CHD3-212ENST00000570758 ZSCAN26Q16670 478 aa4.4□□□□□ -1.71
CHD3-212ENST00000570758 LRRC36Q1X8D7 754 aa4.4□□□□□ -1.71
CHD3-212ENST00000570758 MIDNQ504T8 468 aa4.4□□□□□ -1.71
CHD3-212ENST00000570758 LDLRAD2Q5SZI1 272 aa4.4□□□□□ -1.71
CHD3-212ENST00000570758 ZNF691Q5VV52 312 aa4.4□□□□□ -1.71
CHD3-212ENST00000570758 OLFML2AQ68BL7 652 aa4.4□□□□□ -1.71
CHD3-212ENST00000570758 ASPHD2Q6ICH7 369 aa4.4□□□□□ -1.71
CHD3-212ENST00000570758 ZNF782Q6ZMW2 699 aaPredicted RBP4.4□□□□□ -1.71
CHD3-212ENST00000570758 C17orf107Q6ZR85 190 aa4.4□□□□□ -1.71
CHD3-212ENST00000570758 LHFPL2Q6ZUX7 228 aa4.4□□□□□ -1.71
CHD3-212ENST00000570758 OR8H2Q8N162 312 aa4.4□□□□□ -1.71
CHD3-212ENST00000570758 ZNF676Q8N7Q3 588 aa4.4□□□□□ -1.71
CHD3-212ENST00000570758 TPRX1Q8N7U7 411 aa4.4□□□□□ -1.71
CHD3-212ENST00000570758 ASCC1Q8N9N2 400 aaKnown RBP4.4□□□□□ -1.71
CHD3-212ENST00000570758 ZNF555Q8NEP9 628 aa4.4□□□□□ -1.71
CHD3-212ENST00000570758 OR4S1Q8NGB4 309 aa4.4□□□□□ -1.71
CHD3-212ENST00000570758 OR5D18Q8NGL1 313 aa4.4□□□□□ -1.71
CHD3-212ENST00000570758 OR5D13Q8NGL4 314 aa4.4□□□□□ -1.71
CHD3-212ENST00000570758 OR13C9Q8NGT0 318 aa4.4□□□□□ -1.71
CHD3-212ENST00000570758 CNIH3Q8TBE1 160 aa4.4□□□□□ -1.71
CHD3-212ENST00000570758 RPS4Y2Q8TD47 263 aa4.4□□□□□ -1.71
CHD3-212ENST00000570758 WFDC12Q8WWY7 111 aa4.4□□□□□ -1.71
CHD3-212ENST00000570758 RGP1Q92546 391 aaPredicted RBP4.4□□□□□ -1.71
CHD3-212ENST00000570758 DYRK2Q92630 601 aa4.4□□□□□ -1.71
CHD3-212ENST00000570758 EMG1Q92979 244 aaKnown RBP4.4□□□□□ -1.71
CHD3-212ENST00000570758 STMN2Q93045 179 aa4.4□□□□□ -1.71
CHD3-212ENST00000570758 SPSB1Q96BD6 273 aa4.4□□□□□ -1.71
CHD3-212ENST00000570758 MRPL48Q96GC5 212 aaKnown RBP4.4□□□□□ -1.71
CHD3-212ENST00000570758 SNX22Q96L94 193 aa4.4□□□□□ -1.71
CHD3-212ENST00000570758 Q96MT0 163 aa4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms