RNA–Protein interactions for RNA: ENST00000568877.5

COMMD4-224, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 770 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-224ENST00000568877 METTL9Q9H1A3 318 aa13.98□□□□□ -0.17
COMMD4-224ENST00000568877 RNF167Q9H6Y7 350 aa13.98□□□□□ -0.17
COMMD4-224ENST00000568877 HMG20AQ9NP66 347 aa13.98□□□□□ -0.17
COMMD4-224ENST00000568877 MRPS28Q9Y2Q9 187 aaKnown RBP13.98□□□□□ -0.17
COMMD4-224ENST00000568877 IGKV1D-17A0A075B6S4 117 aa13.97□□□□□ -0.17
COMMD4-224ENST00000568877 RFPL4AA6NLU0 287 aa13.97□□□□□ -0.17
COMMD4-224ENST00000568877 RFPL4AL1F8VTS6 287 aa13.97□□□□□ -0.17
COMMD4-224ENST00000568877 ADAM20O43506 726 aa13.97□□□□□ -0.17
COMMD4-224ENST00000568877 CALCBP10092 127 aa13.97□□□□□ -0.17
COMMD4-224ENST00000568877 PRKACAP17612 351 aa13.97□□□□□ -0.17
COMMD4-224ENST00000568877 AMY2BP19961 511 aa13.97□□□□□ -0.17
COMMD4-224ENST00000568877 RPL5P46777 297 aaKnown RBP13.97□□□□□ -0.17
COMMD4-224ENST00000568877 MTNR1BP49286 362 aa13.97□□□□□ -0.17
COMMD4-224ENST00000568877 BMXP51813 675 aa13.97□□□□□ -0.17
COMMD4-224ENST00000568877 TMEM249Q2WGJ8 235 aa13.97□□□□□ -0.17
COMMD4-224ENST00000568877 C1orf100Q5SVJ3 147 aa13.97□□□□□ -0.17
COMMD4-224ENST00000568877 ATPAF1Q5TC12 328 aaPredicted RBP13.97□□□□□ -0.17
COMMD4-224ENST00000568877 AWAT2Q6E213 333 aa13.97□□□□□ -0.17
COMMD4-224ENST00000568877 ELP2Q6IA86 826 aa13.97□□□□□ -0.17
COMMD4-224ENST00000568877 FIP1L1Q6UN15 594 aaKnown RBP13.97□□□□□ -0.17
COMMD4-224ENST00000568877 GLIPR1L1Q6UWM5 242 aa13.97□□□□□ -0.17
COMMD4-224ENST00000568877 NEIL1Q96FI4 390 aaPredicted RBP13.97□□□□□ -0.17
COMMD4-224ENST00000568877 CCL13Q99616 98 aa13.97□□□□□ -0.17
COMMD4-224ENST00000568877 DNTTIP1Q9H147 329 aa13.97□□□□□ -0.17
COMMD4-224ENST00000568877 IL36GQ9NZH8 169 aa13.97□□□□□ -0.17
COMMD4-224ENST00000568877 KAAG1Q9UBP8 84 aa13.97□□□□□ -0.17
COMMD4-224ENST00000568877 V9GY05 133 aa13.97□□□□□ -0.17
COMMD4-224ENST00000568877 ITPR3Q14573 2671 aa13.96□□□□□ -0.17
COMMD4-224ENST00000568877 SLC22A1O15245 554 aa13.96□□□□□ -0.17
COMMD4-224ENST00000568877 TMPRSS2O15393 492 aa13.96□□□□□ -0.17
COMMD4-224ENST00000568877 ZNF780AO75290 641 aaPredicted RBP13.96□□□□□ -0.17
COMMD4-224ENST00000568877 HTR3BO95264 441 aa13.96□□□□□ -0.17
COMMD4-224ENST00000568877 TFF1P04155 84 aa13.96□□□□□ -0.17
COMMD4-224ENST00000568877 RAB3BP20337 219 aa13.96□□□□□ -0.17
COMMD4-224ENST00000568877 PRDX2P32119 198 aa13.96□□□□□ -0.17
COMMD4-224ENST00000568877 GABRA2P47869 451 aa13.96□□□□□ -0.17
COMMD4-224ENST00000568877 ZNF788Q6ZQV5 615 aa13.96□□□□□ -0.17
COMMD4-224ENST00000568877 NLRC3Q7RTR2 1065 aa13.96□□□□□ -0.17
COMMD4-224ENST00000568877 SLC36A1Q7Z2H8 476 aa13.96□□□□□ -0.17
COMMD4-224ENST00000568877 TPRA1Q86W33 373 aa13.96□□□□□ -0.17
COMMD4-224ENST00000568877 Q8NFD4 153 aa13.96□□□□□ -0.17
COMMD4-224ENST00000568877 OR8B3Q8NGG8 313 aa13.96□□□□□ -0.17
COMMD4-224ENST00000568877 OR6M1Q8NGM8 313 aa13.96□□□□□ -0.17
COMMD4-224ENST00000568877 OR10K1Q8NGX5 313 aa13.96□□□□□ -0.17
COMMD4-224ENST00000568877 TBC1D15Q8TC07 691 aa13.96□□□□□ -0.17
COMMD4-224ENST00000568877 C1orf159Q96HA4 380 aa13.96□□□□□ -0.17
COMMD4-224ENST00000568877 OR8B2Q96RD0 313 aa13.96□□□□□ -0.17
COMMD4-224ENST00000568877 PLGRKTQ9HBL7 147 aa13.96□□□□□ -0.17
COMMD4-224ENST00000568877 PCDHB16Q9NRJ7 776 aa13.96□□□□□ -0.17
COMMD4-224ENST00000568877 IL36RNQ9UBH0 155 aa13.96□□□□□ -0.17
COMMD4-224ENST00000568877 CTSZQ9UBR2 303 aa13.96□□□□□ -0.17
COMMD4-224ENST00000568877 GHRLQ9UBU3 117 aa13.96□□□□□ -0.17
COMMD4-224ENST00000568877 OR14J1Q9UGF5 321 aa13.96□□□□□ -0.17
COMMD4-224ENST00000568877 ZNF222Q9UK12 451 aa13.96□□□□□ -0.17
COMMD4-224ENST00000568877 ZNF469Q96JG9 3925 aaPredicted RBP13.95□□□□□ -0.18
COMMD4-224ENST00000568877 NKX6-3A6NJ46 265 aa13.95□□□□□ -0.18
COMMD4-224ENST00000568877 FAM157AC9JC47 383 aa13.95□□□□□ -0.18
COMMD4-224ENST00000568877 SLC17A2O00624 439 aa13.95□□□□□ -0.18
COMMD4-224ENST00000568877 CSTBP04080 98 aaKnown RBP13.95□□□□□ -0.18
COMMD4-224ENST00000568877 INHBBP09529 407 aa13.95□□□□□ -0.18
COMMD4-224ENST00000568877 IGHV4-31P0DP07 118 aa13.95□□□□□ -0.18
COMMD4-224ENST00000568877 FOSL1P15407 271 aa13.95□□□□□ -0.18
COMMD4-224ENST00000568877 HTR2CP28335 458 aa13.95□□□□□ -0.18
COMMD4-224ENST00000568877 SDC2P34741 201 aa13.95□□□□□ -0.18
COMMD4-224ENST00000568877 GZMKP49863 264 aa13.95□□□□□ -0.18
COMMD4-224ENST00000568877 OR10A3P58181 314 aa13.95□□□□□ -0.18
COMMD4-224ENST00000568877 FGF12P61328 243 aa13.95□□□□□ -0.18
COMMD4-224ENST00000568877 LSM3P62310 102 aaKnown RBP13.95□□□□□ -0.18
COMMD4-224ENST00000568877 GPR176Q14439 515 aa13.95□□□□□ -0.18
COMMD4-224ENST00000568877 ZNF146Q15072 292 aa13.95□□□□□ -0.18
COMMD4-224ENST00000568877 SLC22A6Q4U2R8 563 aa13.95□□□□□ -0.18
COMMD4-224ENST00000568877 SPIN3Q5JUX0 258 aa13.95□□□□□ -0.18
COMMD4-224ENST00000568877 GPR107Q5VW38 600 aa13.95□□□□□ -0.18
COMMD4-224ENST00000568877 FAM166AQ6J272 317 aa13.95□□□□□ -0.18
COMMD4-224ENST00000568877 ANKRD13BQ86YJ7 626 aa13.95□□□□□ -0.18
COMMD4-224ENST00000568877 CD177Q8N6Q3 437 aa13.95□□□□□ -0.18
COMMD4-224ENST00000568877 SDSLQ96GA7 329 aa13.95□□□□□ -0.18
COMMD4-224ENST00000568877 MED30Q96HR3 178 aa13.95□□□□□ -0.18
COMMD4-224ENST00000568877 C1orf147Q96MC9 270 aaPredicted RBP13.95□□□□□ -0.18
COMMD4-224ENST00000568877 GAFA1Q96PS6 74 aa13.95□□□□□ -0.18
COMMD4-224ENST00000568877 A0A1B0GW55 424 aa13.94□□□□□ -0.18
COMMD4-224ENST00000568877 SIGLEC5O15389 551 aa13.94□□□□□ -0.18
COMMD4-224ENST00000568877 UBBP0CG47 229 aa13.94□□□□□ -0.18
COMMD4-224ENST00000568877 DUX4L2P0CJ85 424 aa13.94□□□□□ -0.18
COMMD4-224ENST00000568877 DUX4L3P0CJ86 424 aa13.94□□□□□ -0.18
COMMD4-224ENST00000568877 DUX4L4P0CJ87 422 aa13.94□□□□□ -0.18
COMMD4-224ENST00000568877 DUX4L5P0CJ88 424 aa13.94□□□□□ -0.18
COMMD4-224ENST00000568877 DUX4L6P0CJ89 424 aa13.94□□□□□ -0.18
COMMD4-224ENST00000568877 DUX4L7P0CJ90 424 aa13.94□□□□□ -0.18
COMMD4-224ENST00000568877 SERPINA2P20848 420 aa13.94□□□□□ -0.18
COMMD4-224ENST00000568877 DUSP1P28562 367 aa13.94□□□□□ -0.18
COMMD4-224ENST00000568877 PITPNBP48739 271 aa13.94□□□□□ -0.18
COMMD4-224ENST00000568877 CEBPDP49716 269 aaPredicted RBP13.94□□□□□ -0.18
COMMD4-224ENST00000568877 SNU13P55769 128 aaKnown RBP13.94□□□□□ -0.18
COMMD4-224ENST00000568877 SEC61A1P61619 476 aaKnown RBP13.94□□□□□ -0.18
COMMD4-224ENST00000568877 IL13RA1P78552 427 aa13.94□□□□□ -0.18
COMMD4-224ENST00000568877 RAB11BQ15907 218 aa13.94□□□□□ -0.18
COMMD4-224ENST00000568877 DGUOKQ16854 277 aa13.94□□□□□ -0.18
COMMD4-224ENST00000568877 ESCO2Q56NI9 601 aa13.94□□□□□ -0.18
COMMD4-224ENST00000568877 DUX4L9Q6RFH8 374 aaPredicted RBP13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms