RNA–Protein interactions for RNA: ENST00000567805.5

CLK3-219, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 327 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-219ENST00000567805 CHRM2P08172 466 aa3.91□□□□□ -1.78
CLK3-219ENST00000567805 RPSAP08865 295 aaKnown RBP3.91□□□□□ -1.78
CLK3-219ENST00000567805 KIR3DL2P43630 455 aa3.91□□□□□ -1.78
CLK3-219ENST00000567805 CEBPDP49716 269 aaPredicted RBP3.91□□□□□ -1.78
CLK3-219ENST00000567805 RBP2P50120 134 aa3.91□□□□□ -1.78
CLK3-219ENST00000567805 CCR9P51686 369 aa3.91□□□□□ -1.78
CLK3-219ENST00000567805 DLX1P56177 255 aa3.91□□□□□ -1.78
CLK3-219ENST00000567805 ERVFRD-1P60508 538 aa3.91□□□□□ -1.78
CLK3-219ENST00000567805 ERVK11-1P61568 191 aa3.91□□□□□ -1.78
CLK3-219ENST00000567805 ACTA2P62736 377 aa3.91□□□□□ -1.78
CLK3-219ENST00000567805 ACTG2P63267 376 aa3.91□□□□□ -1.78
CLK3-219ENST00000567805 ZNF85Q03923 595 aa3.91□□□□□ -1.78
CLK3-219ENST00000567805 PRB3Q04118 309 aaPredicted RBP3.91□□□□□ -1.78
CLK3-219ENST00000567805 CNN3Q15417 329 aaKnown RBP3.91□□□□□ -1.78
CLK3-219ENST00000567805 UBE2V2Q15819 145 aa3.91□□□□□ -1.78
CLK3-219ENST00000567805 TAF9Q16594 264 aa3.91□□□□□ -1.78
CLK3-219ENST00000567805 ZIK1Q3SY52 487 aaPredicted RBP3.91□□□□□ -1.78
CLK3-219ENST00000567805 MIDNQ504T8 468 aa3.91□□□□□ -1.78
CLK3-219ENST00000567805 TP53I3Q53FA7 332 aa3.91□□□□□ -1.78
CLK3-219ENST00000567805 DHRS7BQ6IAN0 325 aaPredicted RBP3.91□□□□□ -1.78
CLK3-219ENST00000567805 FDX2Q6P4F2 183 aa3.91□□□□□ -1.78
CLK3-219ENST00000567805 C17orf107Q6ZR85 190 aa3.91□□□□□ -1.78
CLK3-219ENST00000567805 ANGPTL5Q86XS5 388 aa3.91□□□□□ -1.78
CLK3-219ENST00000567805 EGFL6Q8IUX8 553 aa3.91□□□□□ -1.78
CLK3-219ENST00000567805 MKXQ8IYA7 352 aa3.91□□□□□ -1.78
CLK3-219ENST00000567805 FAM185AQ8N0U4 392 aa3.91□□□□□ -1.78
CLK3-219ENST00000567805 CBR4Q8N4T8 237 aa3.91□□□□□ -1.78
CLK3-219ENST00000567805 ACBD7Q8N6N7 88 aa3.91□□□□□ -1.78
CLK3-219ENST00000567805 CD177Q8N6Q3 437 aa3.91□□□□□ -1.78
CLK3-219ENST00000567805 ZSCAN4Q8NAM6 433 aaPredicted RBP3.91□□□□□ -1.78
CLK3-219ENST00000567805 BEND2Q8NDZ0 799 aa3.91□□□□□ -1.78
CLK3-219ENST00000567805 DNAAF1Q8NEP3 725 aa3.91□□□□□ -1.78
CLK3-219ENST00000567805 OR2G2Q8NGZ5 317 aa3.91□□□□□ -1.78
CLK3-219ENST00000567805 OR5R1Q8NH85 324 aa3.91□□□□□ -1.78
CLK3-219ENST00000567805 TRMT10AQ8TBZ6 339 aaKnown RBP3.91□□□□□ -1.78
CLK3-219ENST00000567805 TAF15Q92804 592 aaKnown RBP eCLIP3.91□□□□□ -1.78
CLK3-219ENST00000567805 UBE2FQ969M7 185 aa3.91□□□□□ -1.78
CLK3-219ENST00000567805 SPSB1Q96BD6 273 aa3.91□□□□□ -1.78
CLK3-219ENST00000567805 RNFT2Q96EX2 444 aa3.91□□□□□ -1.78
CLK3-219ENST00000567805 BORCS8Q96FH0 119 aa3.91□□□□□ -1.78
CLK3-219ENST00000567805 EAF1Q96JC9 268 aaPredicted RBP3.91□□□□□ -1.78
CLK3-219ENST00000567805 CEP19Q96LK0 163 aa3.91□□□□□ -1.78
CLK3-219ENST00000567805 Q96MT0 163 aa3.91□□□□□ -1.78
CLK3-219ENST00000567805 MBOAT4Q96T53 435 aa3.91□□□□□ -1.78
CLK3-219ENST00000567805 RSRP1Q9BUV0 290 aa3.91□□□□□ -1.78
CLK3-219ENST00000567805 C19orf12Q9NSK7 152 aa3.91□□□□□ -1.78
CLK3-219ENST00000567805 MTCH1Q9NZJ7 389 aa3.91□□□□□ -1.78
CLK3-219ENST00000567805 FRRS1LQ9P0K9 344 aa3.91□□□□□ -1.78
CLK3-219ENST00000567805 OR14J1Q9UGF5 321 aa3.91□□□□□ -1.78
CLK3-219ENST00000567805 VPREB3Q9UKI3 123 aa3.91□□□□□ -1.78
CLK3-219ENST00000567805 EXOGQ9Y2C4 368 aaKnown RBP3.91□□□□□ -1.78
CLK3-219ENST00000567805 GMPPBQ9Y5P6 360 aa3.91□□□□□ -1.78
CLK3-219ENST00000567805 VWFP04275 2813 aa3.91□□□□□ -1.78
CLK3-219ENST00000567805 TET2Q6N021 2002 aaPredicted RBP3.9□□□□□ -1.78
CLK3-219ENST00000567805 IGKV1-27A0A075B6S5 117 aa3.9□□□□□ -1.79
CLK3-219ENST00000567805 IGKV1-9A0A0C4DH69 117 aa3.9□□□□□ -1.79
CLK3-219ENST00000567805 TRBV2A0A0J9YWF9 115 aa3.9□□□□□ -1.79
CLK3-219ENST00000567805 LOC100130705A0A1B0GUX0 176 aa3.9□□□□□ -1.79
CLK3-219ENST00000567805 TMEM238LA0A1B0GVL6 79 aa3.9□□□□□ -1.79
CLK3-219ENST00000567805 A0A1W2PRD5 423 aa3.9□□□□□ -1.79
CLK3-219ENST00000567805 A0A1W2PRF3 423 aa3.9□□□□□ -1.79
CLK3-219ENST00000567805 A0A1W2PRM7 423 aa3.9□□□□□ -1.79
CLK3-219ENST00000567805 C17orf98A8MV24 154 aa3.9□□□□□ -1.79
CLK3-219ENST00000567805 F8VVB4 439 aa3.9□□□□□ -1.79
CLK3-219ENST00000567805 F8VWA3 439 aa3.9□□□□□ -1.79
CLK3-219ENST00000567805 J3QLW9 94 aa3.9□□□□□ -1.79
CLK3-219ENST00000567805 EBAG9O00559 213 aa3.9□□□□□ -1.79
CLK3-219ENST00000567805 ZNF737O75373 536 aa3.9□□□□□ -1.79
CLK3-219ENST00000567805 CLPXO76031 633 aa3.9□□□□□ -1.79
CLK3-219ENST00000567805 CYB5AP00167 134 aa3.9□□□□□ -1.79
CLK3-219ENST00000567805 HTR1AP08908 422 aa3.9□□□□□ -1.79
CLK3-219ENST00000567805 DBTP11182 482 aaKnown RBP3.9□□□□□ -1.79
CLK3-219ENST00000567805 ZNF19P17023 458 aa3.9□□□□□ -1.79
CLK3-219ENST00000567805 ZNF20P17024 532 aa3.9□□□□□ -1.79
CLK3-219ENST00000567805 GABRB1P18505 474 aa3.9□□□□□ -1.79
CLK3-219ENST00000567805 ATF1P18846 271 aa3.9□□□□□ -1.79
CLK3-219ENST00000567805 PRKACBP22694 351 aa3.9□□□□□ -1.79
CLK3-219ENST00000567805 AZGP1P25311 298 aaKnown RBP3.9□□□□□ -1.79
CLK3-219ENST00000567805 TGFBR2P37173 567 aa3.9□□□□□ -1.79
CLK3-219ENST00000567805 ATP1B3P54709 279 aa3.9□□□□□ -1.79
CLK3-219ENST00000567805 MTCP1P56278 107 aa3.9□□□□□ -1.79
CLK3-219ENST00000567805 LGALS4P56470 323 aa3.9□□□□□ -1.79
CLK3-219ENST00000567805 OR12D2P58182 307 aa3.9□□□□□ -1.79
CLK3-219ENST00000567805 NANOS3P60323 173 aaKnown RBP3.9□□□□□ -1.79
CLK3-219ENST00000567805 COL10A1Q03692 680 aa3.9□□□□□ -1.79
CLK3-219ENST00000567805 ZNF91Q05481 1191 aa3.9□□□□□ -1.79
CLK3-219ENST00000567805 MEF2CQ06413 473 aaPredicted RBP3.9□□□□□ -1.79
CLK3-219ENST00000567805 MRPL28Q13084 256 aaKnown RBP3.9□□□□□ -1.79
CLK3-219ENST00000567805 ALKBH1Q13686 389 aaKnown RBP3.9□□□□□ -1.79
CLK3-219ENST00000567805 GALEQ14376 348 aa3.9□□□□□ -1.79
CLK3-219ENST00000567805 AANATQ16613 207 aa3.9□□□□□ -1.79
CLK3-219ENST00000567805 LRRC75BQ2VPJ9 315 aa3.9□□□□□ -1.79
CLK3-219ENST00000567805 SPIN3Q5JUX0 258 aa3.9□□□□□ -1.79
CLK3-219ENST00000567805 TMEM200BQ69YZ2 307 aa3.9□□□□□ -1.79
CLK3-219ENST00000567805 HCP5Q6MZN7 132 aa3.9□□□□□ -1.79
CLK3-219ENST00000567805 ZBTB49Q6ZSB9 765 aa3.9□□□□□ -1.79
CLK3-219ENST00000567805 Q6ZSV7 163 aa3.9□□□□□ -1.79
CLK3-219ENST00000567805 LHFPL2Q6ZUX7 228 aa3.9□□□□□ -1.79
CLK3-219ENST00000567805 SLC25A26Q70HW3 274 aa3.9□□□□□ -1.79
CLK3-219ENST00000567805 UTS2BQ765I0 119 aa3.9□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms