RNA–Protein interactions for RNA: ENST00000567320.1

CDH1-211, Transcript of cadherin 1, humanhuman

TSL 3

Gene CDH1, Length 352 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-211ENST00000567320 FCN3O75636 299 aa0.26□□□□□ -2.37
CDH1-211ENST00000567320 POP7O75817 140 aaKnown RBP0.26□□□□□ -2.37
CDH1-211ENST00000567320 TTC4O95801 387 aa0.26□□□□□ -2.37
CDH1-211ENST00000567320 P01737 135 aa0.26□□□□□ -2.37
CDH1-211ENST00000567320 RHOCP08134 193 aa0.26□□□□□ -2.37
CDH1-211ENST00000567320 OR12D1P0DN82 309 aa0.26□□□□□ -2.37
CDH1-211ENST00000567320 S100A2P29034 98 aa0.26□□□□□ -2.37
CDH1-211ENST00000567320 HMOX2P30519 316 aa0.26□□□□□ -2.37
CDH1-211ENST00000567320 SLC35A1P78382 337 aa0.26□□□□□ -2.37
CDH1-211ENST00000567320 CASP8Q14790 479 aa0.26□□□□□ -2.37
CDH1-211ENST00000567320 RPEL1Q2QD12 228 aa0.26□□□□□ -2.37
CDH1-211ENST00000567320 SPIN4Q56A73 249 aa0.26□□□□□ -2.37
CDH1-211ENST00000567320 TTMPQ5BVD1 217 aa0.26□□□□□ -2.37
CDH1-211ENST00000567320 TWF2Q6IBS0 349 aaKnown RBP0.26□□□□□ -2.37
CDH1-211ENST00000567320 DPPA2Q7Z7J5 298 aa0.26□□□□□ -2.37
CDH1-211ENST00000567320 TEX9Q8N6V9 391 aa0.26□□□□□ -2.37
CDH1-211ENST00000567320 OR4K2Q8NGD2 314 aa0.26□□□□□ -2.37
CDH1-211ENST00000567320 GSDMAQ96QA5 445 aa0.26□□□□□ -2.37
CDH1-211ENST00000567320 SPACA5Q96QH8 159 aa0.26□□□□□ -2.37
CDH1-211ENST00000567320 RETNLBQ9BQ08 111 aa0.26□□□□□ -2.37
CDH1-211ENST00000567320 AGMATQ9BSE5 352 aa0.26□□□□□ -2.37
CDH1-211ENST00000567320 ORC6Q9Y5N6 252 aa0.26□□□□□ -2.37
CDH1-211ENST00000567320 SAR1BQ9Y6B6 198 aa0.26□□□□□ -2.37
CDH1-211ENST00000567320 BICDL2A1A5D9 508 aa0.25□□□□□ -2.37
CDH1-211ENST00000567320 H0Y8G0 127 aa0.25□□□□□ -2.37
CDH1-211ENST00000567320 TRAPPC3O43617 180 aa0.25□□□□□ -2.37
CDH1-211ENST00000567320 OR2F2O95006 317 aa0.25□□□□□ -2.37
CDH1-211ENST00000567320 SMC2O95347 1197 aa0.25□□□□□ -2.37
CDH1-211ENST00000567320 HLA-AP01891 365 aaKnown RBP0.25□□□□□ -2.37
CDH1-211ENST00000567320 PTMAP06454 111 aaKnown RBP0.25□□□□□ -2.37
CDH1-211ENST00000567320 HTR2CP28335 458 aa0.25□□□□□ -2.37
CDH1-211ENST00000567320 GABRA4P48169 554 aa0.25□□□□□ -2.37
CDH1-211ENST00000567320 SULT1E1P49888 294 aa0.25□□□□□ -2.37
CDH1-211ENST00000567320 ATP5IP56385 69 aaPredicted RBP0.25□□□□□ -2.37
CDH1-211ENST00000567320 RGS8P57771 180 aaPredicted RBP0.25□□□□□ -2.37
CDH1-211ENST00000567320 PAFAH1B2P68402 229 aa0.25□□□□□ -2.37
CDH1-211ENST00000567320 SSX1Q16384 188 aa0.25□□□□□ -2.37
CDH1-211ENST00000567320 LGALS9CQ6DKI2 356 aa0.25□□□□□ -2.37
CDH1-211ENST00000567320 THOC7Q6I9Y2 204 aaKnown RBP0.25□□□□□ -2.37
CDH1-211ENST00000567320 ANGPTL8Q6UXH0 198 aa0.25□□□□□ -2.37
CDH1-211ENST00000567320 CLEC19AQ6UXS0 136 aa0.25□□□□□ -2.37
CDH1-211ENST00000567320 LINC00596Q86U02 117 aa0.25□□□□□ -2.37
CDH1-211ENST00000567320 CYP4Z2PQ8N1L4 340 aa0.25□□□□□ -2.37
CDH1-211ENST00000567320 SLC25A45Q8N413 288 aa0.25□□□□□ -2.37
CDH1-211ENST00000567320 OR8A1Q8NGG7 326 aa0.25□□□□□ -2.37
CDH1-211ENST00000567320 OR4C16Q8NGL9 310 aa0.25□□□□□ -2.37
CDH1-211ENST00000567320 MAL2Q969L2 176 aa0.25□□□□□ -2.37
CDH1-211ENST00000567320 RASD2Q96D21 266 aa0.25□□□□□ -2.37
CDH1-211ENST00000567320 SMIM8Q96KF7 97 aa0.25□□□□□ -2.37
CDH1-211ENST00000567320 GABRG3Q99928 467 aa0.25□□□□□ -2.37
CDH1-211ENST00000567320 TSSK6Q9BXA6 273 aa0.25□□□□□ -2.37
CDH1-211ENST00000567320 SPZ1Q9BXG8 430 aa0.25□□□□□ -2.37
CDH1-211ENST00000567320 SLC19A3Q9BZV2 496 aa0.25□□□□□ -2.37
CDH1-211ENST00000567320 OR51B5Q9H339 312 aa0.25□□□□□ -2.37
CDH1-211ENST00000567320 ASB7Q9H672 318 aa0.25□□□□□ -2.37
CDH1-211ENST00000567320 MYEF2Q9P2K5 600 aaKnown RBP0.25□□□□□ -2.37
CDH1-211ENST00000567320 CYB5R1Q9UHQ9 305 aa0.25□□□□□ -2.37
CDH1-211ENST00000567320 PRO0628Q9UI54 55 aa0.25□□□□□ -2.37
CDH1-211ENST00000567320 INSIG2Q9Y5U4 225 aa0.25□□□□□ -2.37
CDH1-211ENST00000567320 URGCP-MRPS24S4R325 110 aa0.25□□□□□ -2.37
CDH1-211ENST00000567320 MUC5BQ9HC84 5762 aaPredicted RBP0.25□□□□□ -2.37
CDH1-211ENST00000567320 SIGLEC1Q9BZZ2 1709 aa0.24□□□□□ -2.37
CDH1-211ENST00000567320 TRBV24-1A0A075B6N3 115 aa0.24□□□□□ -2.37
CDH1-211ENST00000567320 A0A0J9YX75 114 aa0.24□□□□□ -2.37
CDH1-211ENST00000567320 GOLGA8OA6NCC3 632 aa0.24□□□□□ -2.37
CDH1-211ENST00000567320 GOLGA8NF8WBI6 632 aa0.24□□□□□ -2.37
CDH1-211ENST00000567320 SH2D1AO60880 128 aa0.24□□□□□ -2.37
CDH1-211ENST00000567320 WBP4O75554 376 aaKnown RBP0.24□□□□□ -2.37
CDH1-211ENST00000567320 CIB2O75838 187 aa0.24□□□□□ -2.37
CDH1-211ENST00000567320 IMPA1P29218 277 aa0.24□□□□□ -2.37
CDH1-211ENST00000567320 LRRC66Q68CR7 880 aa0.24□□□□□ -2.37
CDH1-211ENST00000567320 VTCN1Q7Z7D3 282 aa0.24□□□□□ -2.37
CDH1-211ENST00000567320 GABRG1Q8N1C3 465 aa0.24□□□□□ -2.37
CDH1-211ENST00000567320 FAM81AQ8TBF8 368 aa0.24□□□□□ -2.37
CDH1-211ENST00000567320 TGS1Q96RS0 853 aaKnown RBP0.24□□□□□ -2.37
CDH1-211ENST00000567320 OR2D2Q9H210 308 aa0.24□□□□□ -2.37
CDH1-211ENST00000567320 MFSD1Q9H3U5 465 aa0.24□□□□□ -2.37
CDH1-211ENST00000567320 VPREB3Q9UKI3 123 aa0.24□□□□□ -2.37
CDH1-211ENST00000567320 ATG2BQ96BY7 2078 aa0.24□□□□□ -2.37
CDH1-211ENST00000567320 C2orf16Q68DN1 1984 aa0.24□□□□□ -2.37
CDH1-211ENST00000567320 A0A1B0GTI1 187 aa0.23□□□□□ -2.37
CDH1-211ENST00000567320 F8VP50 259 aa0.23□□□□□ -2.37
CDH1-211ENST00000567320 UPK1AO00322 258 aa0.23□□□□□ -2.37
CDH1-211ENST00000567320 EEF1E1O43324 174 aaKnown RBP0.23□□□□□ -2.37
CDH1-211ENST00000567320 XRCC2O43543 280 aa0.23□□□□□ -2.37
CDH1-211ENST00000567320 PDYNP01213 254 aa0.23□□□□□ -2.37
CDH1-211ENST00000567320 KRT14P02533 472 aa0.23□□□□□ -2.37
CDH1-211ENST00000567320 ERCC1P07992 297 aaPredicted RBP0.23□□□□□ -2.37
CDH1-211ENST00000567320 CPMP14384 443 aa0.23□□□□□ -2.37
CDH1-211ENST00000567320 GABRA1P14867 456 aa0.23□□□□□ -2.37
CDH1-211ENST00000567320 ZNF7P17097 686 aaPredicted RBP0.23□□□□□ -2.37
CDH1-211ENST00000567320 ARL2P36404 184 aa0.23□□□□□ -2.37
CDH1-211ENST00000567320 MAGEA1P43355 309 aa0.23□□□□□ -2.37
CDH1-211ENST00000567320 C21orf59P57076 290 aa0.23□□□□□ -2.37
CDH1-211ENST00000567320 RPS15P62841 145 aaKnown RBP0.23□□□□□ -2.37
CDH1-211ENST00000567320 LAIR2Q6ISS4 152 aa0.23□□□□□ -2.37
CDH1-211ENST00000567320 CENPQQ7L2Z9 268 aaPredicted RBP0.23□□□□□ -2.37
CDH1-211ENST00000567320 DAW1Q8N136 415 aa0.23□□□□□ -2.37
CDH1-211ENST00000567320 C10orf126Q8N4M7 172 aa0.23□□□□□ -2.37
CDH1-211ENST00000567320 KIF2BQ8N4N8 673 aa0.23□□□□□ -2.37
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms