RNA–Protein interactions for RNA: ENST00000565810.1

CDH1-208, Transcript of cadherin 1, humanhuman

TSL 3

Gene CDH1, Length 282 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-208ENST00000565810 TMEM59Q9BXS4 323 aa6.55□□□□□ -1.36
CDH1-208ENST00000565810 SELENOIQ9C0D9 397 aa6.55□□□□□ -1.36
CDH1-208ENST00000565810 HMG20AQ9NP66 347 aa6.55□□□□□ -1.36
CDH1-208ENST00000565810 RBFOX1Q9NWB1 397 aaKnown RBP6.55□□□□□ -1.36
CDH1-208ENST00000565810 NLKQ9UBE8 527 aa6.55□□□□□ -1.36
CDH1-208ENST00000565810 COMMD3Q9UBI1 195 aa6.55□□□□□ -1.36
CDH1-208ENST00000565810 ADAM30Q9UKF2 790 aa6.55□□□□□ -1.36
CDH1-208ENST00000565810 SPATA2Q9UM82 520 aa6.55□□□□□ -1.36
CDH1-208ENST00000565810 ST3GAL6Q9Y274 331 aa6.55□□□□□ -1.36
CDH1-208ENST00000565810 ETV7Q9Y603 341 aa6.55□□□□□ -1.36
CDH1-208ENST00000565810 GCN1Q92616 2671 aaKnown RBP6.54□□□□□ -1.36
CDH1-208ENST00000565810 IGHV3OR15-7A0A075B7D8 119 aa6.54□□□□□ -1.36
CDH1-208ENST00000565810 A0A0B4J203 849 aa6.54□□□□□ -1.36
CDH1-208ENST00000565810 TMEM272A0A1B0GTI8 110 aa6.54□□□□□ -1.36
CDH1-208ENST00000565810 NKX6-3A6NJ46 265 aa6.54□□□□□ -1.36
CDH1-208ENST00000565810 OR2AT4A6NND4 320 aa6.54□□□□□ -1.36
CDH1-208ENST00000565810 TMEM14DPA8MWL7 114 aa6.54□□□□□ -1.36
CDH1-208ENST00000565810 SH2D1BO14796 132 aa6.54□□□□□ -1.36
CDH1-208ENST00000565810 WNT9BO14905 357 aa6.54□□□□□ -1.36
CDH1-208ENST00000565810 DEGS1O15121 323 aa6.54□□□□□ -1.36
CDH1-208ENST00000565810 SCGNO76038 276 aa6.54□□□□□ -1.36
CDH1-208ENST00000565810 ZNF205O95201 554 aa6.54□□□□□ -1.36
CDH1-208ENST00000565810 FSTL3O95633 263 aa6.54□□□□□ -1.36
CDH1-208ENST00000565810 PAHP00439 452 aa6.54□□□□□ -1.36
CDH1-208ENST00000565810 KNG1P01042 644 aa6.54□□□□□ -1.36
CDH1-208ENST00000565810 CHRM2P08172 466 aa6.54□□□□□ -1.36
CDH1-208ENST00000565810 SNRPBP14678 240 aaKnown RBP6.54□□□□□ -1.36
CDH1-208ENST00000565810 MGMTP16455 207 aa6.54□□□□□ -1.36
CDH1-208ENST00000565810 EGR1P18146 543 aa6.54□□□□□ -1.36
CDH1-208ENST00000565810 RAB6AP20340 208 aa6.54□□□□□ -1.36
CDH1-208ENST00000565810 CPT2P23786 658 aa6.54□□□□□ -1.36
CDH1-208ENST00000565810 CD80P33681 288 aa6.54□□□□□ -1.36
CDH1-208ENST00000565810 MDH2P40926 338 aaKnown RBP6.54□□□□□ -1.36
CDH1-208ENST00000565810 GABRA2P47869 451 aa6.54□□□□□ -1.36
CDH1-208ENST00000565810 ART1P52961 327 aa6.54□□□□□ -1.36
CDH1-208ENST00000565810 SNU13P55769 128 aaKnown RBP6.54□□□□□ -1.36
CDH1-208ENST00000565810 IL13RA2Q14627 380 aa6.54□□□□□ -1.36
CDH1-208ENST00000565810 CLEC12BQ2HXU8 276 aa6.54□□□□□ -1.36
CDH1-208ENST00000565810 SPIN3Q5JUX0 258 aa6.54□□□□□ -1.36
CDH1-208ENST00000565810 FAM201AQ5SY85 155 aa6.54□□□□□ -1.36
CDH1-208ENST00000565810 FOXB2Q5VYV0 432 aa6.54□□□□□ -1.36
CDH1-208ENST00000565810 TEX36Q5VZQ5 186 aa6.54□□□□□ -1.36
CDH1-208ENST00000565810 OR10K2Q6IF99 312 aa6.54□□□□□ -1.36
CDH1-208ENST00000565810 PRSS57Q6UWY2 283 aa6.54□□□□□ -1.36
CDH1-208ENST00000565810 ACP7Q6ZNF0 438 aa6.54□□□□□ -1.36
CDH1-208ENST00000565810 SLC36A1Q7Z2H8 476 aa6.54□□□□□ -1.36
CDH1-208ENST00000565810 LINC00596Q86U02 117 aa6.54□□□□□ -1.36
CDH1-208ENST00000565810 LRRC28Q86X40 367 aaPredicted RBP6.54□□□□□ -1.36
CDH1-208ENST00000565810 TGIF2LYQ8IUE0 185 aa6.54□□□□□ -1.36
CDH1-208ENST00000565810 SPICQ8N5J4 248 aa6.54□□□□□ -1.36
CDH1-208ENST00000565810 Q8NFD4 153 aa6.54□□□□□ -1.36
CDH1-208ENST00000565810 MCFD2Q8NI22 146 aa6.54□□□□□ -1.36
CDH1-208ENST00000565810 PPP1R35Q8TAP8 253 aa6.54□□□□□ -1.36
CDH1-208ENST00000565810 LGALS14Q8TCE9 139 aa6.54□□□□□ -1.36
CDH1-208ENST00000565810 FAM46BQ96A09 425 aa6.54□□□□□ -1.36
CDH1-208ENST00000565810 PTX4Q96A99 478 aa6.54□□□□□ -1.36
CDH1-208ENST00000565810 CMTM3Q96MX0 182 aa6.54□□□□□ -1.36
CDH1-208ENST00000565810 BARHL1Q9BZE3 327 aa6.54□□□□□ -1.36
CDH1-208ENST00000565810 C6orf62Q9GZU0 229 aaPredicted RBP6.54□□□□□ -1.36
CDH1-208ENST00000565810 WDR13Q9H1Z4 485 aa6.54□□□□□ -1.36
CDH1-208ENST00000565810 BANF2Q9H503 90 aa6.54□□□□□ -1.36
CDH1-208ENST00000565810 HES4Q9HCC6 221 aa6.54□□□□□ -1.36
CDH1-208ENST00000565810 DCAF16Q9NXF7 216 aa6.54□□□□□ -1.36
CDH1-208ENST00000565810 FBLN5Q9UBX5 448 aa6.54□□□□□ -1.36
CDH1-208ENST00000565810 OR14J1Q9UGF5 321 aa6.54□□□□□ -1.36
CDH1-208ENST00000565810 OR5V1Q9UGF6 321 aa6.54□□□□□ -1.36
CDH1-208ENST00000565810 PCDHB10Q9UN67 800 aa6.54□□□□□ -1.36
CDH1-208ENST00000565810 WIPI2Q9Y4P8 454 aa6.54□□□□□ -1.36
CDH1-208ENST00000565810 DCHS2Q6V1P9 2916 aa6.53□□□□□ -1.36
CDH1-208ENST00000565810 CRYBG3Q68DQ2 2970 aa6.53□□□□□ -1.36
CDH1-208ENST00000565810 A0A075B6Q4 140 aa6.53□□□□□ -1.36
CDH1-208ENST00000565810 A0A1W2PP11 408 aa6.53□□□□□ -1.36
CDH1-208ENST00000565810 FAM90A10PA6NDY2 464 aa6.53□□□□□ -1.36
CDH1-208ENST00000565810 FAM90A18PA6NE21 464 aa6.53□□□□□ -1.36
CDH1-208ENST00000565810 FAM90A16PA6NEW6 464 aa6.53□□□□□ -1.36
CDH1-208ENST00000565810 FAM90A20PA6NIJ5 464 aa6.53□□□□□ -1.36
CDH1-208ENST00000565810 FAM90A8PA6NJQ4 464 aa6.53□□□□□ -1.36
CDH1-208ENST00000565810 FAM90A7PA6NKC0 464 aa6.53□□□□□ -1.36
CDH1-208ENST00000565810 RFPL4AA6NLU0 287 aa6.53□□□□□ -1.36
CDH1-208ENST00000565810 FAM90A22PA8MWA6 464 aa6.53□□□□□ -1.36
CDH1-208ENST00000565810 FAM90A12PA8MX19 464 aa6.53□□□□□ -1.36
CDH1-208ENST00000565810 FAM90A5PA8MXJ8 464 aa6.53□□□□□ -1.36
CDH1-208ENST00000565810 FAM90A23PA8MXZ1 464 aa6.53□□□□□ -1.36
CDH1-208ENST00000565810 RFPL4AL1F8VTS6 287 aa6.53□□□□□ -1.36
CDH1-208ENST00000565810 F8VVB4 439 aa6.53□□□□□ -1.36
CDH1-208ENST00000565810 F8VWA3 439 aa6.53□□□□□ -1.36
CDH1-208ENST00000565810 LDLRAD4O15165 306 aa6.53□□□□□ -1.36
CDH1-208ENST00000565810 RGS5O15539 181 aa6.53□□□□□ -1.36
CDH1-208ENST00000565810 OR7C1O76099 320 aaPredicted RBP6.53□□□□□ -1.36
CDH1-208ENST00000565810 HAND1O96004 215 aa6.53□□□□□ -1.36
CDH1-208ENST00000565810 GYPAP02724 150 aa6.53□□□□□ -1.36
CDH1-208ENST00000565810 FAM90A15PP0C7V4 464 aa6.53□□□□□ -1.36
CDH1-208ENST00000565810 FAM90A13PP0C7W8 464 aa6.53□□□□□ -1.36
CDH1-208ENST00000565810 FAM90A14PP0C7W9 464 aa6.53□□□□□ -1.36
CDH1-208ENST00000565810 FAM90A24PP0C7X0 464 aa6.53□□□□□ -1.36
CDH1-208ENST00000565810 PSG2P11465 335 aa6.53□□□□□ -1.36
CDH1-208ENST00000565810 ZNF44P15621 663 aa6.53□□□□□ -1.36
CDH1-208ENST00000565810 SLC25A16P16260 332 aa6.53□□□□□ -1.36
CDH1-208ENST00000565810 GABRR1P24046 479 aa6.53□□□□□ -1.36
CDH1-208ENST00000565810 GIFP27352 417 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 86.8 ms