RNA–Protein interactions for RNA: ENST00000564409.1

SPG7-210, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 717 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-210ENST00000564409 TBX5Q99593 518 aa12.19□□□□□ -0.46
SPG7-210ENST00000564409 NPFFR1Q9GZQ6 430 aa12.19□□□□□ -0.46
SPG7-210ENST00000564409 ORC6Q9Y5N6 252 aa12.19□□□□□ -0.46
SPG7-210ENST00000564409 A6NIN4 97 aa12.18□□□□□ -0.46
SPG7-210ENST00000564409 ZNF737O75373 536 aa12.18□□□□□ -0.46
SPG7-210ENST00000564409 CYB5AP00167 134 aa12.18□□□□□ -0.46
SPG7-210ENST00000564409 RPSAP08865 295 aaKnown RBP12.18□□□□□ -0.46
SPG7-210ENST00000564409 CEBPDP49716 269 aaPredicted RBP12.18□□□□□ -0.46
SPG7-210ENST00000564409 RBP2P50120 134 aa12.18□□□□□ -0.46
SPG7-210ENST00000564409 ATP1B3P54709 279 aa12.18□□□□□ -0.46
SPG7-210ENST00000564409 DLX6P56179 175 aa12.18□□□□□ -0.46
SPG7-210ENST00000564409 ISL1P61371 349 aa12.18□□□□□ -0.46
SPG7-210ENST00000564409 ACTC1P68032 377 aa12.18□□□□□ -0.46
SPG7-210ENST00000564409 ACTA1P68133 377 aa12.18□□□□□ -0.46
SPG7-210ENST00000564409 COL10A1Q03692 680 aa12.18□□□□□ -0.46
SPG7-210ENST00000564409 TMEM244Q5VVB8 128 aa12.18□□□□□ -0.46
SPG7-210ENST00000564409 EGFL6Q8IUX8 553 aa12.18□□□□□ -0.46
SPG7-210ENST00000564409 C17orf50Q8WW18 174 aa12.18□□□□□ -0.46
SPG7-210ENST00000564409 MALSU1Q96EH3 234 aa12.18□□□□□ -0.46
SPG7-210ENST00000564409 SNX22Q96L94 193 aa12.18□□□□□ -0.46
SPG7-210ENST00000564409 RIBC2Q9H4K1 309 aa12.18□□□□□ -0.46
SPG7-210ENST00000564409 IMPAD1Q9NX62 359 aa12.18□□□□□ -0.46
SPG7-210ENST00000564409 MTCH1Q9NZJ7 389 aa12.18□□□□□ -0.46
SPG7-210ENST00000564409 PITPNC1Q9UKF7 332 aa12.18□□□□□ -0.46
SPG7-210ENST00000564409 NOTCH1P46531 2555 aa12.18□□□□□ -0.46
SPG7-210ENST00000564409 hADV38S2A0JD32 116 aa12.17□□□□□ -0.46
SPG7-210ENST00000564409 SNTNA6NMZ2 147 aa12.17□□□□□ -0.46
SPG7-210ENST00000564409 ISG15P05161 165 aa12.17□□□□□ -0.46
SPG7-210ENST00000564409 CSF1P09603 554 aa12.17□□□□□ -0.46
SPG7-210ENST00000564409 CCL3L1P16619 93 aa12.17□□□□□ -0.46
SPG7-210ENST00000564409 PRKACBP22694 351 aa12.17□□□□□ -0.46
SPG7-210ENST00000564409 POLR2IP36954 125 aaKnown RBP12.17□□□□□ -0.46
SPG7-210ENST00000564409 EFNB2P52799 333 aa12.17□□□□□ -0.46
SPG7-210ENST00000564409 ZNF273Q14593 569 aa12.17□□□□□ -0.46
SPG7-210ENST00000564409 ODF4Q2M2E3 257 aa12.17□□□□□ -0.46
SPG7-210ENST00000564409 MEDAGQ5VYS4 303 aa12.17□□□□□ -0.46
SPG7-210ENST00000564409 FDX2Q6P4F2 183 aa12.17□□□□□ -0.46
SPG7-210ENST00000564409 SLC25A26Q70HW3 274 aa12.17□□□□□ -0.46
SPG7-210ENST00000564409 UTS2BQ765I0 119 aa12.17□□□□□ -0.46
SPG7-210ENST00000564409 OR11H6Q8NGC7 330 aa12.17□□□□□ -0.46
SPG7-210ENST00000564409 MRPL48Q96GC5 212 aaKnown RBP12.17□□□□□ -0.46
SPG7-210ENST00000564409 GLS2Q9UI32 602 aa12.17□□□□□ -0.46
SPG7-210ENST00000564409 GNG8Q9UK08 70 aa12.17□□□□□ -0.46
SPG7-210ENST00000564409 VWFP04275 2813 aa12.16□□□□□ -0.46
SPG7-210ENST00000564409 IGKV1-27A0A075B6S5 117 aa12.16□□□□□ -0.46
SPG7-210ENST00000564409 LOC107986453A0A1B0GWG9 222 aa12.16□□□□□ -0.46
SPG7-210ENST00000564409 H3BUI4 141 aa12.16□□□□□ -0.46
SPG7-210ENST00000564409 COX7A1P24310 79 aa12.16□□□□□ -0.46
SPG7-210ENST00000564409 PEX2P28328 305 aa12.16□□□□□ -0.46
SPG7-210ENST00000564409 CCR9P51686 369 aa12.16□□□□□ -0.46
SPG7-210ENST00000564409 DYNLT3P51808 116 aa12.16□□□□□ -0.46
SPG7-210ENST00000564409 BMXP51813 675 aa12.16□□□□□ -0.46
SPG7-210ENST00000564409 EDDM3BP56851 147 aa12.16□□□□□ -0.46
SPG7-210ENST00000564409 LY6EQ16553 131 aa12.16□□□□□ -0.46
SPG7-210ENST00000564409 SPIN3Q5JUX0 258 aa12.16□□□□□ -0.46
SPG7-210ENST00000564409 ZNF626Q68DY1 528 aa12.16□□□□□ -0.46
SPG7-210ENST00000564409 ZBTB49Q6ZSB9 765 aa12.16□□□□□ -0.46
SPG7-210ENST00000564409 C10orf67Q8IYJ2 551 aa12.16□□□□□ -0.46
SPG7-210ENST00000564409 PRSS35Q8N3Z0 413 aa12.16□□□□□ -0.46
SPG7-210ENST00000564409 OR2G2Q8NGZ5 317 aa12.16□□□□□ -0.46
SPG7-210ENST00000564409 PPP1R35Q8TAP8 253 aa12.16□□□□□ -0.46
SPG7-210ENST00000564409 RPS4Y2Q8TD47 263 aa12.16□□□□□ -0.46
SPG7-210ENST00000564409 SPSB1Q96BD6 273 aa12.16□□□□□ -0.46
SPG7-210ENST00000564409 HRASLS5Q96KN8 279 aa12.16□□□□□ -0.46
SPG7-210ENST00000564409 ZNF714Q96N38 554 aa12.16□□□□□ -0.46
SPG7-210ENST00000564409 RHOFQ9HBH0 211 aa12.16□□□□□ -0.46
SPG7-210ENST00000564409 NEK6Q9HC98 313 aa12.16□□□□□ -0.46
SPG7-210ENST00000564409 ABCB10Q9NRK6 738 aa12.16□□□□□ -0.46
SPG7-210ENST00000564409 LINC00312Q9Y6C7 94 aa12.16□□□□□ -0.46
SPG7-210ENST00000564409 TRBV2A0A0J9YWF9 115 aa12.15□□□□□ -0.46
SPG7-210ENST00000564409 ODF3BA8MYP8 253 aa12.15□□□□□ -0.46
SPG7-210ENST00000564409 HAND1O96004 215 aa12.15□□□□□ -0.46
SPG7-210ENST00000564409 ARG1P05089 322 aa12.15□□□□□ -0.46
SPG7-210ENST00000564409 ALPLP05186 524 aa12.15□□□□□ -0.46
SPG7-210ENST00000564409 IGHV1-8P0DP01 117 aa12.15□□□□□ -0.46
SPG7-210ENST00000564409 PIPP12273 146 aaPredicted RBP12.15□□□□□ -0.46
SPG7-210ENST00000564409 SNRPGP62308 76 aaKnown RBP12.15□□□□□ -0.46
SPG7-210ENST00000564409 ZNF85Q03923 595 aa12.15□□□□□ -0.46
SPG7-210ENST00000564409 ZNF146Q15072 292 aa12.15□□□□□ -0.46
SPG7-210ENST00000564409 MINOS1Q5TGZ0 78 aa12.15□□□□□ -0.46
SPG7-210ENST00000564409 ZNF782Q6ZMW2 699 aaPredicted RBP12.15□□□□□ -0.46
SPG7-210ENST00000564409 LHFPL2Q6ZUX7 228 aa12.15□□□□□ -0.46
SPG7-210ENST00000564409 PIFOQ8TCI5 191 aa12.15□□□□□ -0.46
SPG7-210ENST00000564409 CFHR4Q92496 578 aa12.15□□□□□ -0.46
SPG7-210ENST00000564409 EMG1Q92979 244 aaKnown RBP12.15□□□□□ -0.46
SPG7-210ENST00000564409 SLAMF9Q96A28 289 aa12.15□□□□□ -0.46
SPG7-210ENST00000564409 MINOS1-NBL1R4GNA1 71 aa12.15□□□□□ -0.46
SPG7-210ENST00000564409 KIAA2026Q5HYC2 2103 aa12.14□□□□□ -0.47
SPG7-210ENST00000564409 DAPL1A0PJW8 107 aa12.14□□□□□ -0.47
SPG7-210ENST00000564409 FUOMA2VDF0 154 aa12.14□□□□□ -0.47
SPG7-210ENST00000564409 F8VVB4 439 aa12.14□□□□□ -0.47
SPG7-210ENST00000564409 F8VWA3 439 aa12.14□□□□□ -0.47
SPG7-210ENST00000564409 MGST3O14880 152 aa12.14□□□□□ -0.47
SPG7-210ENST00000564409 SLC16A6O15403 523 aa12.14□□□□□ -0.47
SPG7-210ENST00000564409 APOL3O95236 402 aa12.14□□□□□ -0.47
SPG7-210ENST00000564409 TSPAN15O95858 294 aa12.14□□□□□ -0.47
SPG7-210ENST00000564409 ZNF20P17024 532 aa12.14□□□□□ -0.47
SPG7-210ENST00000564409 ATF1P18846 271 aa12.14□□□□□ -0.47
SPG7-210ENST00000564409 ERP29P30040 261 aaKnown RBP12.14□□□□□ -0.47
SPG7-210ENST00000564409 KIR3DL2P43630 455 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms