RNA–Protein interactions for RNA: ENST00000561271.1

CDC42BPB-208, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-208ENST00000561271 HTR1AP08908 422 aa14.02□□□□□ -0.17
CDC42BPB-208ENST00000561271 DBTP11182 482 aaKnown RBP14.02□□□□□ -0.17
CDC42BPB-208ENST00000561271 ZNF20P17024 532 aa14.02□□□□□ -0.17
CDC42BPB-208ENST00000561271 PAX6P26367 422 aa14.02□□□□□ -0.17
CDC42BPB-208ENST00000561271 ERVFRD-1P60508 538 aa14.02□□□□□ -0.17
CDC42BPB-208ENST00000561271 TMEM244Q5VVB8 128 aa14.02□□□□□ -0.17
CDC42BPB-208ENST00000561271 BRICD5Q6PL45 260 aa14.02□□□□□ -0.17
CDC42BPB-208ENST00000561271 ZNF782Q6ZMW2 699 aaPredicted RBP14.02□□□□□ -0.17
CDC42BPB-208ENST00000561271 PQLC1Q8N2U9 271 aa14.02□□□□□ -0.17
CDC42BPB-208ENST00000561271 C11orf42Q8N5U0 333 aa14.02□□□□□ -0.17
CDC42BPB-208ENST00000561271 ACBD7Q8N6N7 88 aa14.02□□□□□ -0.17
CDC42BPB-208ENST00000561271 OR51A4Q8NGJ6 313 aa14.02□□□□□ -0.17
CDC42BPB-208ENST00000561271 EMG1Q92979 244 aaKnown RBP14.02□□□□□ -0.17
CDC42BPB-208ENST00000561271 C10orf35Q96D05 121 aa14.02□□□□□ -0.17
CDC42BPB-208ENST00000561271 PELI1Q96FA3 418 aa14.02□□□□□ -0.17
CDC42BPB-208ENST00000561271 FAM234AQ9H0X4 552 aa14.02□□□□□ -0.17
CDC42BPB-208ENST00000561271 RBFOX1Q9NWB1 397 aaKnown RBP14.02□□□□□ -0.17
CDC42BPB-208ENST00000561271 EXOGQ9Y2C4 368 aaKnown RBP14.02□□□□□ -0.17
CDC42BPB-208ENST00000561271 SF3B6Q9Y3B4 125 aaKnown RBP14.02□□□□□ -0.17
CDC42BPB-208ENST00000561271 A0A1W2PPH5 198 aa14.01□□□□□ -0.17
CDC42BPB-208ENST00000561271 SNTNA6NMZ2 147 aa14.01□□□□□ -0.17
CDC42BPB-208ENST00000561271 H3BUX3 64 aa14.01□□□□□ -0.17
CDC42BPB-208ENST00000561271 J3QLW9 94 aa14.01□□□□□ -0.17
CDC42BPB-208ENST00000561271 K7N7A8 449 aa14.01□□□□□ -0.17
CDC42BPB-208ENST00000561271 ZNF737O75373 536 aa14.01□□□□□ -0.17
CDC42BPB-208ENST00000561271 ZNF19P17023 458 aa14.01□□□□□ -0.17
CDC42BPB-208ENST00000561271 AZGP1P25311 298 aaKnown RBP14.01□□□□□ -0.17
CDC42BPB-208ENST00000561271 RBP2P50120 134 aa14.01□□□□□ -0.17
CDC42BPB-208ENST00000561271 BMXP51813 675 aa14.01□□□□□ -0.17
CDC42BPB-208ENST00000561271 ACTA2P62736 377 aa14.01□□□□□ -0.17
CDC42BPB-208ENST00000561271 ACTG2P63267 376 aa14.01□□□□□ -0.17
CDC42BPB-208ENST00000561271 FDX2Q6P4F2 183 aa14.01□□□□□ -0.17
CDC42BPB-208ENST00000561271 Q6ZSV7 163 aa14.01□□□□□ -0.17
CDC42BPB-208ENST00000561271 BEND2Q8NDZ0 799 aa14.01□□□□□ -0.17
CDC42BPB-208ENST00000561271 LINC01006Q8NI28 216 aa14.01□□□□□ -0.17
CDC42BPB-208ENST00000561271 RFT1Q96AA3 541 aa14.01□□□□□ -0.17
CDC42BPB-208ENST00000561271 FGGYQ96C11 551 aa14.01□□□□□ -0.17
CDC42BPB-208ENST00000561271 AJUBAQ96IF1 538 aa14.01□□□□□ -0.17
CDC42BPB-208ENST00000561271 ALG8Q9BVK2 526 aa14.01□□□□□ -0.17
CDC42BPB-208ENST00000561271 AMBNQ9NP70 447 aa14.01□□□□□ -0.17
CDC42BPB-208ENST00000561271 MYRFQ9Y2G1 1151 aa14.01□□□□□ -0.17
CDC42BPB-208ENST00000561271 RNF114Q9Y508 228 aa14.01□□□□□ -0.17
CDC42BPB-208ENST00000561271 OR4C45A6NMZ5 311 aa14□□□□□ -0.17
CDC42BPB-208ENST00000561271 EBAG9O00559 213 aa14□□□□□ -0.17
CDC42BPB-208ENST00000561271 ISG15P05161 165 aa14□□□□□ -0.17
CDC42BPB-208ENST00000561271 ATF1P18846 271 aa14□□□□□ -0.17
CDC42BPB-208ENST00000561271 BCL3P20749 454 aa14□□□□□ -0.17
CDC42BPB-208ENST00000561271 NPBWR2P48146 333 aa14□□□□□ -0.17
CDC42BPB-208ENST00000561271 ATP1B3P54709 279 aa14□□□□□ -0.17
CDC42BPB-208ENST00000561271 SNU13P55769 128 aaKnown RBP14□□□□□ -0.17
CDC42BPB-208ENST00000561271 DLX6P56179 175 aa14□□□□□ -0.17
CDC42BPB-208ENST00000561271 EDDM3BP56851 147 aa14□□□□□ -0.17
CDC42BPB-208ENST00000561271 KRTAP10-3P60369 221 aa14□□□□□ -0.17
CDC42BPB-208ENST00000561271 EDDM3AQ14507 147 aa14□□□□□ -0.17
CDC42BPB-208ENST00000561271 MIDNQ504T8 468 aa14□□□□□ -0.17
CDC42BPB-208ENST00000561271 KCTD20Q7Z5Y7 419 aa14□□□□□ -0.17
CDC42BPB-208ENST00000561271 LHFPL3Q86UP9 236 aa14□□□□□ -0.17
CDC42BPB-208ENST00000561271 EGFL6Q8IUX8 553 aa14□□□□□ -0.17
CDC42BPB-208ENST00000561271 DNAAF1Q8NEP3 725 aa14□□□□□ -0.17
CDC42BPB-208ENST00000561271 OR13C3Q8NGS6 347 aa14□□□□□ -0.17
CDC42BPB-208ENST00000561271 OR5R1Q8NH85 324 aa14□□□□□ -0.17
CDC42BPB-208ENST00000561271 OPALINQ96PE5 141 aa14□□□□□ -0.17
CDC42BPB-208ENST00000561271 HHLA2Q9UM44 414 aa14□□□□□ -0.17
CDC42BPB-208ENST00000561271 NOTCH1P46531 2555 aa14□□□□□ -0.17
CDC42BPB-208ENST00000561271 TMEM82A0PJX8 343 aa13.99□□□□□ -0.17
CDC42BPB-208ENST00000561271 HAND1O96004 215 aa13.99□□□□□ -0.17
CDC42BPB-208ENST00000561271 IGHA1P01876 353 aa13.99□□□□□ -0.17
CDC42BPB-208ENST00000561271 CHRM2P08172 466 aa13.99□□□□□ -0.17
CDC42BPB-208ENST00000561271 CALCBP10092 127 aa13.99□□□□□ -0.17
CDC42BPB-208ENST00000561271 DUSP1P28562 367 aa13.99□□□□□ -0.17
CDC42BPB-208ENST00000561271 CCR9P51686 369 aa13.99□□□□□ -0.17
CDC42BPB-208ENST00000561271 MTCP1P56278 107 aa13.99□□□□□ -0.17
CDC42BPB-208ENST00000561271 ALKBH1Q13686 389 aaKnown RBP13.99□□□□□ -0.17
CDC42BPB-208ENST00000561271 LY6EQ16553 131 aa13.99□□□□□ -0.17
CDC42BPB-208ENST00000561271 TREML4Q6UXN2 200 aa13.99□□□□□ -0.17
CDC42BPB-208ENST00000561271 ZBTB49Q6ZSB9 765 aa13.99□□□□□ -0.17
CDC42BPB-208ENST00000561271 UTS2BQ765I0 119 aa13.99□□□□□ -0.17
CDC42BPB-208ENST00000561271 GDPD3Q7L5L3 318 aa13.99□□□□□ -0.17
CDC42BPB-208ENST00000561271 TCF23Q7RTU1 214 aa13.99□□□□□ -0.17
CDC42BPB-208ENST00000561271 C10orf67Q8IYJ2 551 aa13.99□□□□□ -0.17
CDC42BPB-208ENST00000561271 OR8H2Q8N162 312 aa13.99□□□□□ -0.17
CDC42BPB-208ENST00000561271 ZNF676Q8N7Q3 588 aa13.99□□□□□ -0.17
CDC42BPB-208ENST00000561271 ZSCAN4Q8NAM6 433 aaPredicted RBP13.99□□□□□ -0.17
CDC42BPB-208ENST00000561271 OR13C9Q8NGT0 318 aa13.99□□□□□ -0.17
CDC42BPB-208ENST00000561271 SPACA5Q96QH8 159 aa13.99□□□□□ -0.17
CDC42BPB-208ENST00000561271 SSX3Q99909 188 aa13.99□□□□□ -0.17
CDC42BPB-208ENST00000561271 CITED1Q99966 193 aa13.99□□□□□ -0.17
CDC42BPB-208ENST00000561271 CHST6Q9GZX3 395 aa13.99□□□□□ -0.17
CDC42BPB-208ENST00000561271 PPA2Q9H2U2 334 aa13.99□□□□□ -0.17
CDC42BPB-208ENST00000561271 ISG20L2Q9H9L3 353 aaKnown RBP13.99□□□□□ -0.17
CDC42BPB-208ENST00000561271 TRBV2A0A0J9YWF9 115 aa13.98□□□□□ -0.17
CDC42BPB-208ENST00000561271 LOC100130705A0A1B0GUX0 176 aa13.98□□□□□ -0.17
CDC42BPB-208ENST00000561271 hCG_1809904A0A1W2PP81 198 aa13.98□□□□□ -0.17
CDC42BPB-208ENST00000561271 A0A1W2PPE2 198 aa13.98□□□□□ -0.17
CDC42BPB-208ENST00000561271 A0A1W2PR64 198 aa13.98□□□□□ -0.17
CDC42BPB-208ENST00000561271 A0A1W2PRV1 198 aa13.98□□□□□ -0.17
CDC42BPB-208ENST00000561271 MPZL2O60487 215 aa13.98□□□□□ -0.17
CDC42BPB-208ENST00000561271 CYB5AP00167 134 aa13.98□□□□□ -0.17
CDC42BPB-208ENST00000561271 OCM2P0CE71 109 aa13.98□□□□□ -0.17
CDC42BPB-208ENST00000561271 OCMP0CE72 109 aaPredicted RBP13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms