RNA–Protein interactions for RNA: ENST00000560299.1

SPG11-221, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 437 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-221ENST00000560299 FAM90A24PP0C7X0 464 aa5.46□□□□□ -1.54
SPG11-221ENST00000560299 PAX1P15863 534 aa5.46□□□□□ -1.54
SPG11-221ENST00000560299 CDK2P24941 298 aa5.46□□□□□ -1.54
SPG11-221ENST00000560299 CFHR2P36980 270 aa5.46□□□□□ -1.54
SPG11-221ENST00000560299 VEGFCP49767 419 aa5.46□□□□□ -1.54
SPG11-221ENST00000560299 RPS27AP62979 156 aaKnown RBP5.46□□□□□ -1.54
SPG11-221ENST00000560299 QRFPP83859 136 aa5.46□□□□□ -1.54
SPG11-221ENST00000560299 TLE4Q04727 773 aa5.46□□□□□ -1.54
SPG11-221ENST00000560299 ZNF154Q13106 437 aa5.46□□□□□ -1.54
SPG11-221ENST00000560299 UNC119Q13432 240 aa5.46□□□□□ -1.54
SPG11-221ENST00000560299 TESK1Q15569 626 aa5.46□□□□□ -1.54
SPG11-221ENST00000560299 ZNF181Q2M3W8 571 aa5.46□□□□□ -1.54
SPG11-221ENST00000560299 HACD4Q5VWC8 232 aa5.46□□□□□ -1.54
SPG11-221ENST00000560299 TRIQKQ629K1 86 aa5.46□□□□□ -1.54
SPG11-221ENST00000560299 OR10K2Q6IF99 312 aa5.46□□□□□ -1.54
SPG11-221ENST00000560299 Q6ZR03 302 aa5.46□□□□□ -1.54
SPG11-221ENST00000560299 C1QL2Q7Z5L3 287 aa5.46□□□□□ -1.54
SPG11-221ENST00000560299 LINC00596Q86U02 117 aa5.46□□□□□ -1.54
SPG11-221ENST00000560299 CALHM1Q8IU99 346 aa5.46□□□□□ -1.54
SPG11-221ENST00000560299 C1orf87Q8N0U7 546 aa5.46□□□□□ -1.54
SPG11-221ENST00000560299 OR8H2Q8N162 312 aa5.46□□□□□ -1.54
SPG11-221ENST00000560299 Q8N402 240 aa5.46□□□□□ -1.54
SPG11-221ENST00000560299 MFSD4AQ8N468 514 aa5.46□□□□□ -1.54
SPG11-221ENST00000560299 CHST4Q8NCG5 386 aa5.46□□□□□ -1.54
SPG11-221ENST00000560299 C19orf18Q8NEA5 215 aa5.46□□□□□ -1.54
SPG11-221ENST00000560299 OR4M1Q8NGD0 313 aa5.46□□□□□ -1.54
SPG11-221ENST00000560299 OR11L1Q8NGX0 322 aa5.46□□□□□ -1.54
SPG11-221ENST00000560299 OR10R2Q8NGX6 335 aa5.46□□□□□ -1.54
SPG11-221ENST00000560299 OR10Z1Q8NGY1 313 aa5.46□□□□□ -1.54
SPG11-221ENST00000560299 ZFAND2BQ8WV99 257 aa5.46□□□□□ -1.54
SPG11-221ENST00000560299 FCAMRQ8WWV6 532 aa5.46□□□□□ -1.54
SPG11-221ENST00000560299 AQP3Q92482 292 aa5.46□□□□□ -1.54
SPG11-221ENST00000560299 DVL3Q92997 716 aaPredicted RBP5.46□□□□□ -1.54
SPG11-221ENST00000560299 SLAMF9Q96A28 289 aa5.46□□□□□ -1.54
SPG11-221ENST00000560299 SLC25A38Q96DW6 304 aa5.46□□□□□ -1.54
SPG11-221ENST00000560299 RAB3CQ96E17 227 aa5.46□□□□□ -1.54
SPG11-221ENST00000560299 MEGF10Q96KG7 1140 aa5.46□□□□□ -1.54
SPG11-221ENST00000560299 NEDD4LQ96PU5 975 aa5.46□□□□□ -1.54
SPG11-221ENST00000560299 OR2V2Q96R30 315 aa5.46□□□□□ -1.54
SPG11-221ENST00000560299 NKX3-1Q99801 234 aaPredicted RBP5.46□□□□□ -1.54
SPG11-221ENST00000560299 TM2D1Q9BX74 207 aa5.46□□□□□ -1.54
SPG11-221ENST00000560299 BANF2Q9H503 90 aa5.46□□□□□ -1.54
SPG11-221ENST00000560299 PPP1R3EQ9H7J1 279 aa5.46□□□□□ -1.54
SPG11-221ENST00000560299 SPACA1Q9HBV2 294 aa5.46□□□□□ -1.54
SPG11-221ENST00000560299 RASL12Q9NYN1 266 aa5.46□□□□□ -1.54
SPG11-221ENST00000560299 MYEF2Q9P2K5 600 aaKnown RBP5.46□□□□□ -1.54
SPG11-221ENST00000560299 ST3GAL6Q9Y274 331 aa5.46□□□□□ -1.54
SPG11-221ENST00000560299 ROS1P08922 2347 aa5.46□□□□□ -1.54
SPG11-221ENST00000560299 TRAV18A0A075B6X5 111 aa5.45□□□□□ -1.54
SPG11-221ENST00000560299 A0A0G2JMP0 313 aa5.45□□□□□ -1.54
SPG11-221ENST00000560299 A0A0X1KG70 313 aa5.45□□□□□ -1.54
SPG11-221ENST00000560299 ZSCAN5BA6NJL1 495 aa5.45□□□□□ -1.54
SPG11-221ENST00000560299 SERPINE3A8MV23 424 aa5.45□□□□□ -1.54
SPG11-221ENST00000560299 SULT1C2O00338 296 aa5.45□□□□□ -1.54
SPG11-221ENST00000560299 CDIPTO14735 213 aa5.45□□□□□ -1.54
SPG11-221ENST00000560299 SH2D1BO14796 132 aa5.45□□□□□ -1.54
SPG11-221ENST00000560299 SIAH2O43255 324 aa5.45□□□□□ -1.54
SPG11-221ENST00000560299 NOS1APO75052 506 aaPredicted RBP5.45□□□□□ -1.54
SPG11-221ENST00000560299 PTBP3O95758 552 aaKnown RBP5.45□□□□□ -1.54
SPG11-221ENST00000560299 PLAUP00749 431 aa5.45□□□□□ -1.54
SPG11-221ENST00000560299 IGHV1-46P01743 117 aa5.45□□□□□ -1.54
SPG11-221ENST00000560299 SFTPBP07988 381 aa5.45□□□□□ -1.54
SPG11-221ENST00000560299 GSTP1P09211 210 aaKnown RBP5.45□□□□□ -1.54
SPG11-221ENST00000560299 GSTT2BP0CG30 244 aa5.45□□□□□ -1.54
SPG11-221ENST00000560299 PGA5P0DJD9 388 aa5.45□□□□□ -1.54
SPG11-221ENST00000560299 PRKACAP17612 351 aa5.45□□□□□ -1.54
SPG11-221ENST00000560299 BCL3P20749 454 aa5.45□□□□□ -1.54
SPG11-221ENST00000560299 GLRA1P23415 457 aa5.45□□□□□ -1.54
SPG11-221ENST00000560299 LOXP28300 417 aaPredicted RBP5.45□□□□□ -1.54
SPG11-221ENST00000560299 BLVRBP30043 206 aaPredicted RBP5.45□□□□□ -1.54
SPG11-221ENST00000560299 PRSS3P35030 304 aa5.45□□□□□ -1.54
SPG11-221ENST00000560299 GATA4P43694 442 aa5.45□□□□□ -1.54
SPG11-221ENST00000560299 EFNB2P52799 333 aa5.45□□□□□ -1.54
SPG11-221ENST00000560299 RBM11P57052 281 aaKnown RBP5.45□□□□□ -1.54
SPG11-221ENST00000560299 TAS2R20P59543 309 aa5.45□□□□□ -1.54
SPG11-221ENST00000560299 DEFA1P59665 94 aa5.45□□□□□ -1.54
SPG11-221ENST00000560299 DEFA3P59666 94 aa5.45□□□□□ -1.54
SPG11-221ENST00000560299 AP3S2P59780 193 aa5.45□□□□□ -1.54
SPG11-221ENST00000560299 FGF12P61328 243 aa5.45□□□□□ -1.54
SPG11-221ENST00000560299 MRPS15P82914 257 aaKnown RBP5.45□□□□□ -1.54
SPG11-221ENST00000560299 SCN1BQ07699 218 aa5.45□□□□□ -1.54
SPG11-221ENST00000560299 MAB21L1Q13394 359 aa5.45□□□□□ -1.54
SPG11-221ENST00000560299 IL13RA2Q14627 380 aa5.45□□□□□ -1.54
SPG11-221ENST00000560299 PNLIPRP3Q17RR3 467 aa5.45□□□□□ -1.54
SPG11-221ENST00000560299 MSMPQ1L6U9 139 aa5.45□□□□□ -1.54
SPG11-221ENST00000560299 MPV17LQ2QL34 196 aa5.45□□□□□ -1.54
SPG11-221ENST00000560299 SMIM21Q3B7S5 101 aa5.45□□□□□ -1.54
SPG11-221ENST00000560299 NHLRC3Q5JS37 347 aa5.45□□□□□ -1.54
SPG11-221ENST00000560299 SPIN3Q5JUX0 258 aa5.45□□□□□ -1.54
SPG11-221ENST00000560299 Q6ZTK2 550 aa5.45□□□□□ -1.54
SPG11-221ENST00000560299 FAM90A1Q86YD7 464 aa5.45□□□□□ -1.54
SPG11-221ENST00000560299 SNX29P2Q8IUI4 249 aa5.45□□□□□ -1.54
SPG11-221ENST00000560299 FAM58AQ8N1B3 248 aa5.45□□□□□ -1.54
SPG11-221ENST00000560299 FAM89BQ8N5H3 189 aa5.45□□□□□ -1.54
SPG11-221ENST00000560299 POC1AQ8NBT0 407 aa5.45□□□□□ -1.54
SPG11-221ENST00000560299 TMEM104Q8NE00 496 aa5.45□□□□□ -1.54
SPG11-221ENST00000560299 Q8NFD4 153 aa5.45□□□□□ -1.54
SPG11-221ENST00000560299 OR4M2Q8NGB6 313 aa5.45□□□□□ -1.54
SPG11-221ENST00000560299 OR10K1Q8NGX5 313 aa5.45□□□□□ -1.54
SPG11-221ENST00000560299 ITLN1Q8WWA0 313 aa5.45□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms