RNA–Protein interactions for RNA: ENST00000559850.5

RABGGTA-211, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 3

Gene RABGGTA, Length 534 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-211ENST00000559850 OCMP0CE72 109 aaPredicted RBP12.2□□□□□ -0.46
RABGGTA-211ENST00000559850 MYL12AP19105 171 aa12.2□□□□□ -0.46
RABGGTA-211ENST00000559850 DCKP27707 260 aa12.2□□□□□ -0.46
RABGGTA-211ENST00000559850 DUSP1P28562 367 aa12.2□□□□□ -0.46
RABGGTA-211ENST00000559850 RBP2P50120 134 aa12.2□□□□□ -0.46
RABGGTA-211ENST00000559850 AQP4P55087 323 aa12.2□□□□□ -0.46
RABGGTA-211ENST00000559850 CAV3P56539 151 aa12.2□□□□□ -0.46
RABGGTA-211ENST00000559850 COL10A1Q03692 680 aa12.2□□□□□ -0.46
RABGGTA-211ENST00000559850 DOC2BQ14184 412 aa12.2□□□□□ -0.46
RABGGTA-211ENST00000559850 C9orf139Q6ZV77 190 aa12.2□□□□□ -0.46
RABGGTA-211ENST00000559850 AHSA2Q719I0 299 aa12.2□□□□□ -0.46
RABGGTA-211ENST00000559850 EGFL6Q8IUX8 553 aa12.2□□□□□ -0.46
RABGGTA-211ENST00000559850 DNAAF1Q8NEP3 725 aa12.2□□□□□ -0.46
RABGGTA-211ENST00000559850 BPIFB6Q8NFQ5 453 aa12.2□□□□□ -0.46
RABGGTA-211ENST00000559850 OR13C5Q8NGS8 318 aa12.2□□□□□ -0.46
RABGGTA-211ENST00000559850 C8orf46Q8TAG6 207 aa12.2□□□□□ -0.46
RABGGTA-211ENST00000559850 EMG1Q92979 244 aaKnown RBP12.2□□□□□ -0.46
RABGGTA-211ENST00000559850 JMJD8Q96S16 334 aa12.2□□□□□ -0.46
RABGGTA-211ENST00000559850 MYCBPQ99417 103 aaPredicted RBP12.2□□□□□ -0.46
RABGGTA-211ENST00000559850 ZCCHC4Q9H5U6 513 aa12.2□□□□□ -0.46
RABGGTA-211ENST00000559850 DHDHQ9UQ10 334 aa12.2□□□□□ -0.46
RABGGTA-211ENST00000559850 CAB39Q9Y376 341 aaPredicted RBP12.2□□□□□ -0.46
RABGGTA-211ENST00000559850 KPTNQ9Y664 436 aa12.2□□□□□ -0.46
RABGGTA-211ENST00000559850 IGKV1-12A0A0C4DH73 117 aa12.19□□□□□ -0.46
RABGGTA-211ENST00000559850 IRGMA1A4Y4 181 aa12.19□□□□□ -0.46
RABGGTA-211ENST00000559850 SLC1A7O00341 560 aa12.19□□□□□ -0.46
RABGGTA-211ENST00000559850 GPR37O15354 613 aa12.19□□□□□ -0.46
RABGGTA-211ENST00000559850 KNG1P01042 644 aa12.19□□□□□ -0.46
RABGGTA-211ENST00000559850 IGKV1D-12P01611 117 aa12.19□□□□□ -0.46
RABGGTA-211ENST00000559850 PIPP12273 146 aaPredicted RBP12.19□□□□□ -0.46
RABGGTA-211ENST00000559850 PRKACBP22694 351 aa12.19□□□□□ -0.46
RABGGTA-211ENST00000559850 ACTG1P63261 375 aa12.19□□□□□ -0.46
RABGGTA-211ENST00000559850 ST3GAL4Q11206 333 aa12.19□□□□□ -0.46
RABGGTA-211ENST00000559850 MRPL28Q13084 256 aaKnown RBP12.19□□□□□ -0.46
RABGGTA-211ENST00000559850 CDK5R1Q15078 307 aa12.19□□□□□ -0.46
RABGGTA-211ENST00000559850 PDCD1Q15116 288 aa12.19□□□□□ -0.46
RABGGTA-211ENST00000559850 ASPHD2Q6ICH7 369 aa12.19□□□□□ -0.46
RABGGTA-211ENST00000559850 RPL22L1Q6P5R6 122 aaKnown RBP12.19□□□□□ -0.46
RABGGTA-211ENST00000559850 CRIP3Q6Q6R5 217 aa12.19□□□□□ -0.46
RABGGTA-211ENST00000559850 TMPRSS11AQ6ZMR5 421 aa12.19□□□□□ -0.46
RABGGTA-211ENST00000559850 LHFPL2Q6ZUX7 228 aa12.19□□□□□ -0.46
RABGGTA-211ENST00000559850 ZNF561Q8N587 486 aa12.19□□□□□ -0.46
RABGGTA-211ENST00000559850 TFAP2CQ92754 450 aa12.19□□□□□ -0.46
RABGGTA-211ENST00000559850 ZDHHC16Q969W1 377 aa12.19□□□□□ -0.46
RABGGTA-211ENST00000559850 ORAI1Q96D31 301 aa12.19□□□□□ -0.46
RABGGTA-211ENST00000559850 VCXQ9H320 206 aa12.19□□□□□ -0.46
RABGGTA-211ENST00000559850 TAS2R4Q9NYW5 299 aa12.19□□□□□ -0.46
RABGGTA-211ENST00000559850 EXOSC1Q9Y3B2 195 aaKnown RBP12.19□□□□□ -0.46
RABGGTA-211ENST00000559850 HSPE1-MOB4S4R3N1 261 aa12.19□□□□□ -0.46
RABGGTA-211ENST00000559850 DSCAML1Q8TD84 2053 aa12.18□□□□□ -0.46
RABGGTA-211ENST00000559850 A0A0U1RQK1 487 aa12.18□□□□□ -0.46
RABGGTA-211ENST00000559850 PNMA8CA0A1B0GUJ8 204 aa12.18□□□□□ -0.46
RABGGTA-211ENST00000559850 RNASEK-C17orf49H0YIS7 233 aa12.18□□□□□ -0.46
RABGGTA-211ENST00000559850 HOXA3O43365 443 aaPredicted RBP12.18□□□□□ -0.46
RABGGTA-211ENST00000559850 TK1P04183 234 aa12.18□□□□□ -0.46
RABGGTA-211ENST00000559850 HCKP08631 526 aa12.18□□□□□ -0.46
RABGGTA-211ENST00000559850 PRKACAP17612 351 aa12.18□□□□□ -0.46
RABGGTA-211ENST00000559850 ERVFRD-1P60508 538 aa12.18□□□□□ -0.46
RABGGTA-211ENST00000559850 SLC9A3R2Q15599 337 aa12.18□□□□□ -0.46
RABGGTA-211ENST00000559850 C11orf91Q3C1V1 193 aa12.18□□□□□ -0.46
RABGGTA-211ENST00000559850 CMTM4Q8IZR5 234 aa12.18□□□□□ -0.46
RABGGTA-211ENST00000559850 PIP4P2Q8N4L2 257 aa12.18□□□□□ -0.46
RABGGTA-211ENST00000559850 ASCC1Q8N9N2 400 aaKnown RBP12.18□□□□□ -0.46
RABGGTA-211ENST00000559850 OR51A2Q8NGJ7 313 aa12.18□□□□□ -0.46
RABGGTA-211ENST00000559850 FAM216AQ8WUB2 273 aa12.18□□□□□ -0.46
RABGGTA-211ENST00000559850 FBLIM1Q8WUP2 373 aa12.18□□□□□ -0.46
RABGGTA-211ENST00000559850 SPSB1Q96BD6 273 aa12.18□□□□□ -0.46
RABGGTA-211ENST00000559850 NEK6Q9HC98 313 aa12.18□□□□□ -0.46
RABGGTA-211ENST00000559850 BABAM2Q9NXR7 383 aa12.18□□□□□ -0.46
RABGGTA-211ENST00000559850 PSORS1C1Q9UIG5 152 aa12.18□□□□□ -0.46
RABGGTA-211ENST00000559850 TMEM82A0PJX8 343 aa12.17□□□□□ -0.46
RABGGTA-211ENST00000559850 EFCAB10A6NFE3 127 aa12.17□□□□□ -0.46
RABGGTA-211ENST00000559850 HAND1O96004 215 aa12.17□□□□□ -0.46
RABGGTA-211ENST00000559850 RPSAP08865 295 aaKnown RBP12.17□□□□□ -0.46
RABGGTA-211ENST00000559850 CCL3L1P16619 93 aa12.17□□□□□ -0.46
RABGGTA-211ENST00000559850 C21orf33P30042 268 aaPredicted RBP12.17□□□□□ -0.46
RABGGTA-211ENST00000559850 PDZK1IP1Q13113 114 aa12.17□□□□□ -0.46
RABGGTA-211ENST00000559850 ZNF273Q14593 569 aa12.17□□□□□ -0.46
RABGGTA-211ENST00000559850 TMEM200BQ69YZ2 307 aa12.17□□□□□ -0.46
RABGGTA-211ENST00000559850 SERPINA12Q8IW75 414 aa12.17□□□□□ -0.46
RABGGTA-211ENST00000559850 MKXQ8IYA7 352 aa12.17□□□□□ -0.46
RABGGTA-211ENST00000559850 FAM58AQ8N1B3 248 aa12.17□□□□□ -0.46
RABGGTA-211ENST00000559850 KIR3DL3Q8N743 410 aa12.17□□□□□ -0.46
RABGGTA-211ENST00000559850 RPS4Y2Q8TD47 263 aa12.17□□□□□ -0.46
RABGGTA-211ENST00000559850 ZFAND2BQ8WV99 257 aa12.17□□□□□ -0.46
RABGGTA-211ENST00000559850 SGCDQ92629 289 aa12.17□□□□□ -0.46
RABGGTA-211ENST00000559850 CHST6Q9GZX3 395 aa12.17□□□□□ -0.46
RABGGTA-211ENST00000559850 CHCHD3Q9NX63 227 aaKnown RBP12.17□□□□□ -0.46
RABGGTA-211ENST00000559850 TRBV23-1A0A0A0MS06 115 aa12.16□□□□□ -0.46
RABGGTA-211ENST00000559850 SIRPB1O00241 398 aa12.16□□□□□ -0.46
RABGGTA-211ENST00000559850 OGG1O15527 345 aa12.16□□□□□ -0.46
RABGGTA-211ENST00000559850 SULT1B1O43704 296 aa12.16□□□□□ -0.46
RABGGTA-211ENST00000559850 ZNF737O75373 536 aa12.16□□□□□ -0.46
RABGGTA-211ENST00000559850 CYB5AP00167 134 aa12.16□□□□□ -0.46
RABGGTA-211ENST00000559850 MT-ND2P03891 347 aa12.16□□□□□ -0.46
RABGGTA-211ENST00000559850 PRTN3P24158 256 aa12.16□□□□□ -0.46
RABGGTA-211ENST00000559850 RPL31P62899 125 aaKnown RBP12.16□□□□□ -0.46
RABGGTA-211ENST00000559850 EDDM3AQ14507 147 aa12.16□□□□□ -0.46
RABGGTA-211ENST00000559850 SATL1Q86VE3 508 aa12.16□□□□□ -0.46
RABGGTA-211ENST00000559850 STX19Q8N4C7 294 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms