RNA–Protein interactions for RNA: ENST00000559193.5

SPG11-215, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPG11, Length 2,579 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-215ENST00000559193 BORCS8Q96FH0 119 aa14.39□□□□□ -0.11
SPG11-215ENST00000559193 AKR1E2Q96JD6 320 aa14.39□□□□□ -0.11
SPG11-215ENST00000559193 CACFD1Q9UGQ2 172 aa14.39□□□□□ -0.11
SPG11-215ENST00000559193 KCNIP3Q9Y2W7 256 aa14.39□□□□□ -0.11
SPG11-215ENST00000559193 NSG2Q9Y328 171 aa14.39□□□□□ -0.11
SPG11-215ENST00000559193 WDR87Q6ZQQ6 2873 aa14.39□□□□□ -0.11
SPG11-215ENST00000559193 CCDC187A0A096LP49 1063 aa14.39□□□□□ -0.11
SPG11-215ENST00000559193 KLF7O75840 302 aaPredicted RBP14.39□□□□□ -0.11
SPG11-215ENST00000559193 DIRAS3O95661 229 aa14.39□□□□□ -0.11
SPG11-215ENST00000559193 LCATP04180 440 aa14.39□□□□□ -0.11
SPG11-215ENST00000559193 PATE4P0C8F1 98 aa14.39□□□□□ -0.11
SPG11-215ENST00000559193 KCNJ3P48549 501 aa14.39□□□□□ -0.11
SPG11-215ENST00000559193 PHLDA2Q53GA4 152 aa14.39□□□□□ -0.11
SPG11-215ENST00000559193 SLC22A25Q6T423 547 aa14.39□□□□□ -0.11
SPG11-215ENST00000559193 SKA3Q8IX90 412 aa14.39□□□□□ -0.11
SPG11-215ENST00000559193 ZFP82Q8N141 532 aa14.39□□□□□ -0.11
SPG11-215ENST00000559193 AKR7LQ8NHP1 331 aa14.39□□□□□ -0.11
SPG11-215ENST00000559193 SECTM1Q8WVN6 248 aa14.39□□□□□ -0.11
SPG11-215ENST00000559193 CRLF2Q9HC73 371 aa14.39□□□□□ -0.11
SPG11-215ENST00000559193 COA4Q9NYJ1 87 aa14.39□□□□□ -0.11
SPG11-215ENST00000559193 H7C1Q1 480 aa14.38□□□□□ -0.11
SPG11-215ENST00000559193 XRCC2O43543 280 aa14.38□□□□□ -0.11
SPG11-215ENST00000559193 CST2P09228 141 aa14.38□□□□□ -0.11
SPG11-215ENST00000559193 ZNF468Q5VIY5 522 aaPredicted RBP14.38□□□□□ -0.11
SPG11-215ENST00000559193 LYSMD4Q5XG99 296 aa14.38□□□□□ -0.11
SPG11-215ENST00000559193 TMEM42Q69YG0 159 aa14.38□□□□□ -0.11
SPG11-215ENST00000559193 LHFPL2Q6ZUX7 228 aa14.38□□□□□ -0.11
SPG11-215ENST00000559193 LRTM2Q8N967 370 aa14.38□□□□□ -0.11
SPG11-215ENST00000559193 MR1Q95460 341 aa14.38□□□□□ -0.11
SPG11-215ENST00000559193 C18orf12Q96KH6 178 aa14.38□□□□□ -0.11
SPG11-215ENST00000559193 SLC2A9Q9NRM0 540 aa14.38□□□□□ -0.11
SPG11-215ENST00000559193 TMEM38BQ9NVV0 291 aa14.38□□□□□ -0.11
SPG11-215ENST00000559193 WNT16Q9UBV4 365 aa14.38□□□□□ -0.11
SPG11-215ENST00000559193 ZDHHC8Q9ULC8 765 aa14.38□□□□□ -0.11
SPG11-215ENST00000559193 STARD10Q9Y365 291 aa14.38□□□□□ -0.11
SPG11-215ENST00000559193 KIAA1549Q9HCM3 1950 aa14.38□□□□□ -0.11
SPG11-215ENST00000559193 OR6C6A6NF89 314 aa14.38□□□□□ -0.11
SPG11-215ENST00000559193 GLI4P10075 376 aa14.38□□□□□ -0.11
SPG11-215ENST00000559193 B4GALT1P15291 398 aa14.38□□□□□ -0.11
SPG11-215ENST00000559193 ZNF32P17041 273 aa14.38□□□□□ -0.11
SPG11-215ENST00000559193 B3GALT5-AS1P59052 145 aa14.38□□□□□ -0.11
SPG11-215ENST00000559193 KRTAP27-1Q3LI81 207 aa14.38□□□□□ -0.11
SPG11-215ENST00000559193 Q6ZPA2 131 aa14.38□□□□□ -0.11
SPG11-215ENST00000559193 LIAT1Q6ZQX7 453 aa14.38□□□□□ -0.11
SPG11-215ENST00000559193 FBXL14Q8N1E6 418 aa14.38□□□□□ -0.11
SPG11-215ENST00000559193 TMEM156Q8N614 296 aa14.38□□□□□ -0.11
SPG11-215ENST00000559193 OR5L1Q8NGL2 311 aa14.38□□□□□ -0.11
SPG11-215ENST00000559193 M1APQ8TC57 530 aa14.38□□□□□ -0.11
SPG11-215ENST00000559193 CLDN23Q96B33 292 aa14.38□□□□□ -0.11
SPG11-215ENST00000559193 ALKBH3Q96Q83 286 aaPredicted RBP14.38□□□□□ -0.11
SPG11-215ENST00000559193 SF3B5Q9BWJ5 86 aaKnown RBP14.38□□□□□ -0.11
SPG11-215ENST00000559193 FAM212BQ9NTI7 297 aaPredicted RBP14.38□□□□□ -0.11
SPG11-215ENST00000559193 TIMM10BQ9Y5J6 103 aa14.38□□□□□ -0.11
SPG11-215ENST00000559193 NRASP01111 189 aa14.37□□□□□ -0.11
SPG11-215ENST00000559193 PPT1P50897 306 aa14.37□□□□□ -0.11
SPG11-215ENST00000559193 MIDNQ504T8 468 aa14.37□□□□□ -0.11
SPG11-215ENST00000559193 OR11L1Q8NGX0 322 aa14.37□□□□□ -0.11
SPG11-215ENST00000559193 MSI2Q96DH6 328 aaKnown RBP14.37□□□□□ -0.11
SPG11-215ENST00000559193 C12orf57Q99622 126 aa14.37□□□□□ -0.11
SPG11-215ENST00000559193 SUCNR1Q9BXA5 334 aa14.37□□□□□ -0.11
SPG11-215ENST00000559193 RNF122Q9H9V4 155 aa14.37□□□□□ -0.11
SPG11-215ENST00000559193 A0A0G2JMM0 328 aa14.37□□□□□ -0.11
SPG11-215ENST00000559193 A0A1W2PPB8 328 aa14.37□□□□□ -0.11
SPG11-215ENST00000559193 A0A1W2PRS3 328 aa14.37□□□□□ -0.11
SPG11-215ENST00000559193 PQLC2LA1A4F0 135 aa14.37□□□□□ -0.11
SPG11-215ENST00000559193 KIR3DP1A8MWS1 328 aa14.37□□□□□ -0.11
SPG11-215ENST00000559193 NME2P1O60361 137 aa14.37□□□□□ -0.11
SPG11-215ENST00000559193 CBR3O75828 277 aa14.37□□□□□ -0.11
SPG11-215ENST00000559193 HTR5AP47898 357 aa14.37□□□□□ -0.11
SPG11-215ENST00000559193 IL11RAQ14626 422 aa14.37□□□□□ -0.11
SPG11-215ENST00000559193 HLA-BQ31612 363 aa14.37□□□□□ -0.11
SPG11-215ENST00000559193 RPS19BP1Q86WX3 136 aaKnown RBP14.37□□□□□ -0.11
SPG11-215ENST00000559193 OSR2Q8N2R0 312 aa14.37□□□□□ -0.11
SPG11-215ENST00000559193 OR52M1Q8NGK5 317 aa14.37□□□□□ -0.11
SPG11-215ENST00000559193 SCRT1Q9BWW7 348 aa14.37□□□□□ -0.11
SPG11-215ENST00000559193 KPTNQ9Y664 436 aa14.37□□□□□ -0.11
SPG11-215ENST00000559193 GPR137BO60478 399 aa14.36□□□□□ -0.11
SPG11-215ENST00000559193 TSPAN15O95858 294 aa14.36□□□□□ -0.11
SPG11-215ENST00000559193 SEC11BP0C7V7 166 aa14.36□□□□□ -0.11
SPG11-215ENST00000559193 DANCRP0C864 163 aa14.36□□□□□ -0.11
SPG11-215ENST00000559193 SNCAP37840 140 aa14.36□□□□□ -0.11
SPG11-215ENST00000559193 MLF1P58340 268 aa14.36□□□□□ -0.11
SPG11-215ENST00000559193 RAC3P60763 192 aa14.36□□□□□ -0.11
SPG11-215ENST00000559193 AKIRIN2Q53H80 203 aa14.36□□□□□ -0.11
SPG11-215ENST00000559193 IFI44Q8TCB0 444 aa14.36□□□□□ -0.11
SPG11-215ENST00000559193 HPSE2Q8WWQ2 592 aa14.36□□□□□ -0.11
SPG11-215ENST00000559193 NAT6Q93015 286 aa14.36□□□□□ -0.11
SPG11-215ENST00000559193 BCO1Q9HAY6 547 aa14.36□□□□□ -0.11
SPG11-215ENST00000559193 SMCO4Q9NRQ5 59 aa14.36□□□□□ -0.11
SPG11-215ENST00000559193 CCDC85CA6NKD9 419 aa14.36□□□□□ -0.11
SPG11-215ENST00000559193 AKR1C3P42330 323 aa14.36□□□□□ -0.11
SPG11-215ENST00000559193 P2RY1P47900 373 aa14.36□□□□□ -0.11
SPG11-215ENST00000559193 PSG4Q00888 419 aa14.36□□□□□ -0.11
SPG11-215ENST00000559193 YRDCQ86U90 279 aaKnown RBP14.36□□□□□ -0.11
SPG11-215ENST00000559193 FGFBP3Q8TAT2 258 aa14.36□□□□□ -0.11
SPG11-215ENST00000559193 MOB3AQ96BX8 217 aa14.36□□□□□ -0.11
SPG11-215ENST00000559193 CLCC1Q96S66 551 aa14.36□□□□□ -0.11
SPG11-215ENST00000559193 GINS3Q9BRX5 216 aa14.36□□□□□ -0.11
SPG11-215ENST00000559193 FBXO9Q9UK97 447 aaPredicted RBP14.36□□□□□ -0.11
SPG11-215ENST00000559193 ST3GAL6Q9Y274 331 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms