RNA–Protein interactions for RNA: ENST00000558970.2

GABPB1-208, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 5

Gene GABPB1, Length 730 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-208ENST00000558970 ZNF404Q494X3 552 aa10.4□□□□□ -0.74
GABPB1-208ENST00000558970 SLC22A6Q4U2R8 563 aa10.4□□□□□ -0.74
GABPB1-208ENST00000558970 GLT8D1Q68CQ7 371 aa10.4□□□□□ -0.74
GABPB1-208ENST00000558970 DUX4L9Q6RFH8 374 aaPredicted RBP10.4□□□□□ -0.74
GABPB1-208ENST00000558970 GLIPR1L1Q6UWM5 242 aa10.4□□□□□ -0.74
GABPB1-208ENST00000558970 ACP7Q6ZNF0 438 aa10.4□□□□□ -0.74
GABPB1-208ENST00000558970 CLVS1Q8IUQ0 354 aaPredicted RBP10.4□□□□□ -0.74
GABPB1-208ENST00000558970 FAM46BQ96A09 425 aa10.4□□□□□ -0.74
GABPB1-208ENST00000558970 KCTD7Q96MP8 289 aa10.4□□□□□ -0.74
GABPB1-208ENST00000558970 CCL13Q99616 98 aa10.4□□□□□ -0.74
GABPB1-208ENST00000558970 NRIP2Q9BQI9 281 aa10.4□□□□□ -0.74
GABPB1-208ENST00000558970 LPAR2Q9HBW0 351 aa10.4□□□□□ -0.74
GABPB1-208ENST00000558970 TMEM165Q9HC07 324 aa10.4□□□□□ -0.74
GABPB1-208ENST00000558970 NLKQ9UBE8 527 aa10.4□□□□□ -0.74
GABPB1-208ENST00000558970 DUX4Q9UBX2 424 aa10.4□□□□□ -0.74
GABPB1-208ENST00000558970 OR2AT4A6NND4 320 aa10.39□□□□□ -0.75
GABPB1-208ENST00000558970 PDCD5O14737 125 aa10.39□□□□□ -0.75
GABPB1-208ENST00000558970 TMPRSS2O15393 492 aa10.39□□□□□ -0.75
GABPB1-208ENST00000558970 ADAM20O43506 726 aa10.39□□□□□ -0.75
GABPB1-208ENST00000558970 SELLP14151 372 aa10.39□□□□□ -0.75
GABPB1-208ENST00000558970 RAB3BP20337 219 aa10.39□□□□□ -0.75
GABPB1-208ENST00000558970 RPL5P46777 297 aaKnown RBP10.39□□□□□ -0.75
GABPB1-208ENST00000558970 SCN1BQ07699 218 aa10.39□□□□□ -0.75
GABPB1-208ENST00000558970 IKZF1Q13422 519 aa10.39□□□□□ -0.75
GABPB1-208ENST00000558970 SLC16A12Q6ZSM3 486 aa10.39□□□□□ -0.75
GABPB1-208ENST00000558970 LRRC28Q86X40 367 aaPredicted RBP10.39□□□□□ -0.75
GABPB1-208ENST00000558970 FAM58AQ8N1B3 248 aa10.39□□□□□ -0.75
GABPB1-208ENST00000558970 MUC20Q8N307 709 aaPredicted RBP10.39□□□□□ -0.75
GABPB1-208ENST00000558970 FGFRL1Q8N441 504 aa10.39□□□□□ -0.75
GABPB1-208ENST00000558970 FAM216BQ8N7L0 139 aa10.39□□□□□ -0.75
GABPB1-208ENST00000558970 ZNF665Q9H7R5 613 aa10.39□□□□□ -0.75
GABPB1-208ENST00000558970 DNHD1Q96M86 4753 aa10.38□□□□□ -0.75
GABPB1-208ENST00000558970 IGKV1D-17A0A075B6S4 117 aa10.38□□□□□ -0.75
GABPB1-208ENST00000558970 A0A096LNT2 108 aa10.38□□□□□ -0.75
GABPB1-208ENST00000558970 A0A0B4J203 849 aa10.38□□□□□ -0.75
GABPB1-208ENST00000558970 TRAV1-2A0A0B4J238 106 aa10.38□□□□□ -0.75
GABPB1-208ENST00000558970 MEGF11A6BM72 1044 aa10.38□□□□□ -0.75
GABPB1-208ENST00000558970 CCDC160A6NGH7 325 aa10.38□□□□□ -0.75
GABPB1-208ENST00000558970 NKX6-3A6NJ46 265 aa10.38□□□□□ -0.75
GABPB1-208ENST00000558970 RFPL4AA6NLU0 287 aa10.38□□□□□ -0.75
GABPB1-208ENST00000558970 RFPL4AL1F8VTS6 287 aa10.38□□□□□ -0.75
GABPB1-208ENST00000558970 CRTAPO75718 401 aaPredicted RBP10.38□□□□□ -0.75
GABPB1-208ENST00000558970 KDM4BO94953 1096 aa10.38□□□□□ -0.75
GABPB1-208ENST00000558970 CSTBP04080 98 aaKnown RBP10.38□□□□□ -0.75
GABPB1-208ENST00000558970 SLC2A2P11168 524 aaPredicted RBP10.38□□□□□ -0.75
GABPB1-208ENST00000558970 PSG2P11465 335 aa10.38□□□□□ -0.75
GABPB1-208ENST00000558970 MUC1P15941 1255 aaPredicted RBP10.38□□□□□ -0.75
GABPB1-208ENST00000558970 GALP22466 123 aa10.38□□□□□ -0.75
GABPB1-208ENST00000558970 HTR2CP28335 458 aa10.38□□□□□ -0.75
GABPB1-208ENST00000558970 CFHR2P36980 270 aa10.38□□□□□ -0.75
GABPB1-208ENST00000558970 SERPINB10P48595 397 aa10.38□□□□□ -0.75
GABPB1-208ENST00000558970 ERVK11-1P61568 191 aa10.38□□□□□ -0.75
GABPB1-208ENST00000558970 PIGYQ3MUY2 71 aa10.38□□□□□ -0.75
GABPB1-208ENST00000558970 TEX36Q5VZQ5 186 aa10.38□□□□□ -0.75
GABPB1-208ENST00000558970 OR10K2Q6IF99 312 aa10.38□□□□□ -0.75
GABPB1-208ENST00000558970 DCDC5Q6ZRR9 648 aa10.38□□□□□ -0.75
GABPB1-208ENST00000558970 NR2C2APQ86WQ0 139 aa10.38□□□□□ -0.75
GABPB1-208ENST00000558970 SPICQ8N5J4 248 aa10.38□□□□□ -0.75
GABPB1-208ENST00000558970 METTL9Q9H1A3 318 aa10.38□□□□□ -0.75
GABPB1-208ENST00000558970 BANF2Q9H503 90 aa10.38□□□□□ -0.75
GABPB1-208ENST00000558970 CTSZQ9UBR2 303 aa10.38□□□□□ -0.75
GABPB1-208ENST00000558970 METRNQ9UJH8 293 aa10.38□□□□□ -0.75
GABPB1-208ENST00000558970 V9GY05 133 aa10.38□□□□□ -0.75
GABPB1-208ENST00000558970 ARHGAP32A7KAX9 2087 aa10.37□□□□□ -0.75
GABPB1-208ENST00000558970 FAM157AC9JC47 383 aa10.37□□□□□ -0.75
GABPB1-208ENST00000558970 SIRPB1O00241 398 aa10.37□□□□□ -0.75
GABPB1-208ENST00000558970 PHF1O43189 567 aaPredicted RBP10.37□□□□□ -0.75
GABPB1-208ENST00000558970 NOS1APO75052 506 aaPredicted RBP10.37□□□□□ -0.75
GABPB1-208ENST00000558970 IGHV2-5P01817 119 aa10.37□□□□□ -0.75
GABPB1-208ENST00000558970 MTNR1BP49286 362 aa10.37□□□□□ -0.75
GABPB1-208ENST00000558970 CAPZA1P52907 286 aa10.37□□□□□ -0.75
GABPB1-208ENST00000558970 LCN2P80188 198 aa10.37□□□□□ -0.75
GABPB1-208ENST00000558970 RAB11BQ15907 218 aa10.37□□□□□ -0.75
GABPB1-208ENST00000558970 TMEM155Q4W5P6 130 aa10.37□□□□□ -0.75
GABPB1-208ENST00000558970 STUMQ69YW2 141 aa10.37□□□□□ -0.75
GABPB1-208ENST00000558970 FIP1L1Q6UN15 594 aaKnown RBP10.37□□□□□ -0.75
GABPB1-208ENST00000558970 Q8IYB0 196 aa10.37□□□□□ -0.75
GABPB1-208ENST00000558970 SAXO1Q8IYX7 474 aa10.37□□□□□ -0.75
GABPB1-208ENST00000558970 CD177Q8N6Q3 437 aa10.37□□□□□ -0.75
GABPB1-208ENST00000558970 ASCC1Q8N9N2 400 aaKnown RBP10.37□□□□□ -0.75
GABPB1-208ENST00000558970 ZSCAN4Q8NAM6 433 aaPredicted RBP10.37□□□□□ -0.75
GABPB1-208ENST00000558970 ZNRF1Q8ND25 227 aa10.37□□□□□ -0.75
GABPB1-208ENST00000558970 TMEM185AQ8NFB2 350 aa10.37□□□□□ -0.75
GABPB1-208ENST00000558970 PXT1Q8NFP0 134 aa10.37□□□□□ -0.75
GABPB1-208ENST00000558970 OR8B3Q8NGG8 313 aa10.37□□□□□ -0.75
GABPB1-208ENST00000558970 OR6M1Q8NGM8 313 aa10.37□□□□□ -0.75
GABPB1-208ENST00000558970 ST8SIA4Q92187 359 aa10.37□□□□□ -0.75
GABPB1-208ENST00000558970 FOXRED1Q96CU9 486 aaPredicted RBP10.37□□□□□ -0.75
GABPB1-208ENST00000558970 GAFA1Q96PS6 74 aa10.37□□□□□ -0.75
GABPB1-208ENST00000558970 OR8B2Q96RD0 313 aa10.37□□□□□ -0.75
GABPB1-208ENST00000558970 UQCC2Q9BRT2 126 aa10.37□□□□□ -0.75
GABPB1-208ENST00000558970 HES4Q9HCC6 221 aa10.37□□□□□ -0.75
GABPB1-208ENST00000558970 HMG20AQ9NP66 347 aa10.37□□□□□ -0.75
GABPB1-208ENST00000558970 RASL12Q9NYN1 266 aa10.37□□□□□ -0.75
GABPB1-208ENST00000558970 DAPK2Q9UIK4 370 aa10.37□□□□□ -0.75
GABPB1-208ENST00000558970 DOCK11Q5JSL3 2073 aa10.37□□□□□ -0.75
GABPB1-208ENST00000558970 SLC17A2O00624 439 aa10.36□□□□□ -0.75
GABPB1-208ENST00000558970 HSPB6O14558 160 aa10.36□□□□□ -0.75
GABPB1-208ENST00000558970 NOL3O60936 208 aaKnown RBP10.36□□□□□ -0.75
GABPB1-208ENST00000558970 GABARAPO95166 117 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms