RNA–Protein interactions for RNA: ENST00000558910.2

TPM1-216, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 1,232 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-216ENST00000558910 C19orf12Q9NSK7 152 aa9.88□□□□□ -0.83
TPM1-216ENST00000558910 ERVK13-1Q9NX77 482 aa9.88□□□□□ -0.83
TPM1-216ENST00000558910 ZNF222Q9UK12 451 aa9.88□□□□□ -0.83
TPM1-216ENST00000558910 POLDIP2Q9Y2S7 368 aa9.88□□□□□ -0.83
TPM1-216ENST00000558910 IGHV1-69DA0A0B4J2H0 117 aa9.87□□□□□ -0.83
TPM1-216ENST00000558910 PNMA8CA0A1B0GUJ8 204 aa9.87□□□□□ -0.83
TPM1-216ENST00000558910 SLC1A7O00341 560 aa9.87□□□□□ -0.83
TPM1-216ENST00000558910 ANGPTL7O43827 346 aa9.87□□□□□ -0.83
TPM1-216ENST00000558910 WBP4O75554 376 aaKnown RBP9.87□□□□□ -0.83
TPM1-216ENST00000558910 IGHV1-69P01742 117 aa9.87□□□□□ -0.83
TPM1-216ENST00000558910 ATF1P18846 271 aa9.87□□□□□ -0.83
TPM1-216ENST00000558910 BCL3P20749 454 aa9.87□□□□□ -0.83
TPM1-216ENST00000558910 PRTN3P24158 256 aa9.87□□□□□ -0.83
TPM1-216ENST00000558910 AZGP1P25311 298 aaKnown RBP9.87□□□□□ -0.83
TPM1-216ENST00000558910 ETV1P50549 477 aa9.87□□□□□ -0.83
TPM1-216ENST00000558910 FUT6P51993 359 aa9.87□□□□□ -0.83
TPM1-216ENST00000558910 GBX2P52951 348 aaPredicted RBP9.87□□□□□ -0.83
TPM1-216ENST00000558910 ATP1B3P54709 279 aa9.87□□□□□ -0.83
TPM1-216ENST00000558910 EDDM3BP56851 147 aa9.87□□□□□ -0.83
TPM1-216ENST00000558910 ISL1P61371 349 aa9.87□□□□□ -0.83
TPM1-216ENST00000558910 COL10A1Q03692 680 aa9.87□□□□□ -0.83
TPM1-216ENST00000558910 EDDM3AQ14507 147 aa9.87□□□□□ -0.83
TPM1-216ENST00000558910 PDCD1Q15116 288 aa9.87□□□□□ -0.83
TPM1-216ENST00000558910 KLHL22Q53GT1 634 aa9.87□□□□□ -0.83
TPM1-216ENST00000558910 ATPAF1Q5TC12 328 aaPredicted RBP9.87□□□□□ -0.83
TPM1-216ENST00000558910 OR2G6Q5TZ20 316 aa9.87□□□□□ -0.83
TPM1-216ENST00000558910 DHRSXQ8N5I4 330 aa9.87□□□□□ -0.83
TPM1-216ENST00000558910 C3orf56Q8N813 242 aa9.87□□□□□ -0.83
TPM1-216ENST00000558910 FAM216AQ8WUB2 273 aa9.87□□□□□ -0.83
TPM1-216ENST00000558910 SLC25A28Q96A46 364 aa9.87□□□□□ -0.83
TPM1-216ENST00000558910 CEP19Q96LK0 163 aa9.87□□□□□ -0.83
TPM1-216ENST00000558910 CHST5Q9GZS9 411 aa9.87□□□□□ -0.83
TPM1-216ENST00000558910 CHST6Q9GZX3 395 aa9.87□□□□□ -0.83
TPM1-216ENST00000558910 RBFOX1Q9NWB1 397 aaKnown RBP9.87□□□□□ -0.83
TPM1-216ENST00000558910 MTCH1Q9NZJ7 389 aa9.87□□□□□ -0.83
TPM1-216ENST00000558910 HHLA2Q9UM44 414 aa9.87□□□□□ -0.83
TPM1-216ENST00000558910 FAM96BQ9Y3D0 163 aa9.87□□□□□ -0.83
TPM1-216ENST00000558910 IGKV1-9A0A0C4DH69 117 aa9.86□□□□□ -0.83
TPM1-216ENST00000558910 MEIOCA2RUB1 952 aa9.86□□□□□ -0.83
TPM1-216ENST00000558910 OR4C45A6NMZ5 311 aa9.86□□□□□ -0.83
TPM1-216ENST00000558910 HCKP08631 526 aa9.86□□□□□ -0.83
TPM1-216ENST00000558910 CCL3L1P16619 93 aa9.86□□□□□ -0.83
TPM1-216ENST00000558910 PRKACAP17612 351 aa9.86□□□□□ -0.83
TPM1-216ENST00000558910 GABRR1P24046 479 aa9.86□□□□□ -0.83
TPM1-216ENST00000558910 COX7A1P24310 79 aa9.86□□□□□ -0.83
TPM1-216ENST00000558910 NPBWR2P48146 333 aa9.86□□□□□ -0.83
TPM1-216ENST00000558910 SCN1BQ07699 218 aa9.86□□□□□ -0.83
TPM1-216ENST00000558910 RAB40BQ12829 278 aa9.86□□□□□ -0.83
TPM1-216ENST00000558910 ZNF691Q5VV52 312 aa9.86□□□□□ -0.83
TPM1-216ENST00000558910 FIP1L1Q6UN15 594 aaKnown RBP9.86□□□□□ -0.83
TPM1-216ENST00000558910 ZNF782Q6ZMW2 699 aaPredicted RBP9.86□□□□□ -0.83
TPM1-216ENST00000558910 KCTD20Q7Z5Y7 419 aa9.86□□□□□ -0.83
TPM1-216ENST00000558910 SATL1Q86VE3 508 aa9.86□□□□□ -0.83
TPM1-216ENST00000558910 Q8N7P7 452 aa9.86□□□□□ -0.83
TPM1-216ENST00000558910 TPRX1Q8N7U7 411 aa9.86□□□□□ -0.83
TPM1-216ENST00000558910 ZFP41Q8N8Y5 198 aa9.86□□□□□ -0.83
TPM1-216ENST00000558910 LY6G5BQ8NDX9 201 aa9.86□□□□□ -0.83
TPM1-216ENST00000558910 OR5AK2Q8NH90 309 aa9.86□□□□□ -0.83
TPM1-216ENST00000558910 NRIP2Q9BQI9 281 aa9.86□□□□□ -0.83
TPM1-216ENST00000558910 COMMD4Q9H0A8 199 aa9.86□□□□□ -0.83
TPM1-216ENST00000558910 RASL12Q9NYN1 266 aa9.86□□□□□ -0.83
TPM1-216ENST00000558910 NKX1-2Q9UD57 310 aaPredicted RBP9.86□□□□□ -0.83
TPM1-216ENST00000558910 CLEC2DQ9UHP7 191 aa9.86□□□□□ -0.83
TPM1-216ENST00000558910 DHDHQ9UQ10 334 aa9.86□□□□□ -0.83
TPM1-216ENST00000558910 KPTNQ9Y664 436 aa9.86□□□□□ -0.83
TPM1-216ENST00000558910 TRBV2A0A0J9YWF9 115 aa9.85□□□□□ -0.83
TPM1-216ENST00000558910 DHRS7CA6NNS2 312 aa9.85□□□□□ -0.83
TPM1-216ENST00000558910 RNASEK-C17orf49H0YIS7 233 aa9.85□□□□□ -0.83
TPM1-216ENST00000558910 SIRPB1O00241 398 aa9.85□□□□□ -0.83
TPM1-216ENST00000558910 CYB5AP00167 134 aa9.85□□□□□ -0.83
TPM1-216ENST00000558910 IGHV4-59P01825 116 aa9.85□□□□□ -0.83
TPM1-216ENST00000558910 RPSAP08865 295 aaKnown RBP9.85□□□□□ -0.83
TPM1-216ENST00000558910 GNAO1P09471 354 aa9.85□□□□□ -0.83
TPM1-216ENST00000558910 LIMS3P0CW19 117 aa9.85□□□□□ -0.83
TPM1-216ENST00000558910 LIMS4P0CW20 117 aa9.85□□□□□ -0.83
TPM1-216ENST00000558910 EEF1B2P24534 225 aaKnown RBP9.85□□□□□ -0.83
TPM1-216ENST00000558910 CFPP27918 469 aa9.85□□□□□ -0.83
TPM1-216ENST00000558910 RBP2P50120 134 aa9.85□□□□□ -0.83
TPM1-216ENST00000558910 RPL31P62899 125 aaKnown RBP9.85□□□□□ -0.83
TPM1-216ENST00000558910 IL24Q13007 206 aa9.85□□□□□ -0.83
TPM1-216ENST00000558910 BLMHQ13867 455 aa9.85□□□□□ -0.83
TPM1-216ENST00000558910 PLA1AQ53H76 456 aa9.85□□□□□ -0.83
TPM1-216ENST00000558910 TTC23Q5W5X9 447 aa9.85□□□□□ -0.83
TPM1-216ENST00000558910 XAF1Q6GPH4 301 aa9.85□□□□□ -0.83
TPM1-216ENST00000558910 MKXQ8IYA7 352 aa9.85□□□□□ -0.83
TPM1-216ENST00000558910 ORAI1Q96D31 301 aa9.85□□□□□ -0.83
TPM1-216ENST00000558910 SDSLQ96GA7 329 aa9.85□□□□□ -0.83
TPM1-216ENST00000558910 OPALINQ96PE5 141 aa9.85□□□□□ -0.83
TPM1-216ENST00000558910 NR1H4Q96RI1 486 aaPredicted RBP9.85□□□□□ -0.83
TPM1-216ENST00000558910 PKIBQ9C010 78 aa9.85□□□□□ -0.83
TPM1-216ENST00000558910 DNTTIP1Q9H147 329 aa9.85□□□□□ -0.83
TPM1-216ENST00000558910 GSTK1Q9Y2Q3 226 aa9.85□□□□□ -0.83
TPM1-216ENST00000558910 XPNPEP2O43895 674 aa9.84□□□□□ -0.83
TPM1-216ENST00000558910 ZFPL1O95159 310 aa9.84□□□□□ -0.83
TPM1-216ENST00000558910 PAHP00439 452 aa9.84□□□□□ -0.83
TPM1-216ENST00000558910 MELTFP08582 738 aa9.84□□□□□ -0.83
TPM1-216ENST00000558910 PRKACBP22694 351 aa9.84□□□□□ -0.83
TPM1-216ENST00000558910 CAV3P56539 151 aa9.84□□□□□ -0.83
TPM1-216ENST00000558910 ZNF273Q14593 569 aa9.84□□□□□ -0.83
TPM1-216ENST00000558910 AWAT1Q58HT5 328 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms