RNA–Protein interactions for RNA: ENST00000558815.5

RPL28-207, Transcript of ribosomal protein L28, humanhuman

TSL 2 BASIC

Gene RPL28, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-207ENST00000558815 CYB5AP00167 134 aa12.55□□□□□ -0.4
RPL28-207ENST00000558815 PRKACBP22694 351 aa12.55□□□□□ -0.4
RPL28-207ENST00000558815 ERVK11-1P61568 191 aa12.55□□□□□ -0.4
RPL28-207ENST00000558815 RPL31P62899 125 aaKnown RBP12.55□□□□□ -0.4
RPL28-207ENST00000558815 GUCA2AQ02747 115 aa12.55□□□□□ -0.4
RPL28-207ENST00000558815 ZNF691Q5VV52 312 aa12.55□□□□□ -0.4
RPL28-207ENST00000558815 C16orf87Q6PH81 154 aa12.55□□□□□ -0.4
RPL28-207ENST00000558815 DMRTB1Q96MA1 342 aa12.55□□□□□ -0.4
RPL28-207ENST00000558815 OPALINQ96PE5 141 aa12.55□□□□□ -0.4
RPL28-207ENST00000558815 PDCD1LG2Q9BQ51 273 aa12.55□□□□□ -0.4
RPL28-207ENST00000558815 CHIAQ9BZP6 476 aa12.55□□□□□ -0.4
RPL28-207ENST00000558815 COMMD4Q9H0A8 199 aa12.55□□□□□ -0.4
RPL28-207ENST00000558815 IL36RNQ9UBH0 155 aa12.55□□□□□ -0.4
RPL28-207ENST00000558815 TRBV2A0A0J9YWF9 115 aa12.54□□□□□ -0.4
RPL28-207ENST00000558815 FAM181BA6NEQ2 426 aa12.54□□□□□ -0.4
RPL28-207ENST00000558815 ANGPTL7O43827 346 aa12.54□□□□□ -0.4
RPL28-207ENST00000558815 IGHV4-59P01825 116 aa12.54□□□□□ -0.4
RPL28-207ENST00000558815 TK1P04183 234 aa12.54□□□□□ -0.4
RPL28-207ENST00000558815 CRYBA1P05813 215 aa12.54□□□□□ -0.4
RPL28-207ENST00000558815 CCDC159P0C7I6 412 aa12.54□□□□□ -0.4
RPL28-207ENST00000558815 LIMS3P0CW19 117 aa12.54□□□□□ -0.4
RPL28-207ENST00000558815 LIMS4P0CW20 117 aa12.54□□□□□ -0.4
RPL28-207ENST00000558815 CCL3L1P16619 93 aa12.54□□□□□ -0.4
RPL28-207ENST00000558815 BCL3P20749 454 aa12.54□□□□□ -0.4
RPL28-207ENST00000558815 DUSP1P28562 367 aa12.54□□□□□ -0.4
RPL28-207ENST00000558815 NPBWR2P48146 333 aa12.54□□□□□ -0.4
RPL28-207ENST00000558815 GTF2A1P52655 376 aaPredicted RBP12.54□□□□□ -0.4
RPL28-207ENST00000558815 TTC23Q5W5X9 447 aa12.54□□□□□ -0.4
RPL28-207ENST00000558815 NCR3LG1Q68D85 454 aa12.54□□□□□ -0.4
RPL28-207ENST00000558815 METAP1DQ6UB28 335 aaPredicted RBP12.54□□□□□ -0.4
RPL28-207ENST00000558815 LHFPL2Q6ZUX7 228 aa12.54□□□□□ -0.4
RPL28-207ENST00000558815 UTS2BQ765I0 119 aa12.54□□□□□ -0.4
RPL28-207ENST00000558815 MKXQ8IYA7 352 aa12.54□□□□□ -0.4
RPL28-207ENST00000558815 DHRSXQ8N5I4 330 aa12.54□□□□□ -0.4
RPL28-207ENST00000558815 DNAAF1Q8NEP3 725 aa12.54□□□□□ -0.4
RPL28-207ENST00000558815 OR5D18Q8NGL1 313 aa12.54□□□□□ -0.4
RPL28-207ENST00000558815 OR5AK2Q8NH90 309 aa12.54□□□□□ -0.4
RPL28-207ENST00000558815 TBC1D15Q8TC07 691 aa12.54□□□□□ -0.4
RPL28-207ENST00000558815 ZNF649Q9BS31 505 aa12.54□□□□□ -0.4
RPL28-207ENST00000558815 PRDM13Q9H4Q3 707 aa12.54□□□□□ -0.4
RPL28-207ENST00000558815 METTL8Q9H825 291 aaKnown RBP12.54□□□□□ -0.4
RPL28-207ENST00000558815 NEK6Q9HC98 313 aa12.54□□□□□ -0.4
RPL28-207ENST00000558815 MRPS18AQ9NVS2 196 aaKnown RBP12.54□□□□□ -0.4
RPL28-207ENST00000558815 RBFOX1Q9NWB1 397 aaKnown RBP12.54□□□□□ -0.4
RPL28-207ENST00000558815 CAB39Q9Y376 341 aaPredicted RBP12.54□□□□□ -0.4
RPL28-207ENST00000558815 A0A1W2PPH5 198 aa12.53□□□□□ -0.4
RPL28-207ENST00000558815 MEIOCA2RUB1 952 aa12.53□□□□□ -0.4
RPL28-207ENST00000558815 TMEM212A6NML5 194 aa12.53□□□□□ -0.4
RPL28-207ENST00000558815 ZFPL1O95159 310 aa12.53□□□□□ -0.4
RPL28-207ENST00000558815 PAHP00439 452 aa12.53□□□□□ -0.4
RPL28-207ENST00000558815 HCKP08631 526 aa12.53□□□□□ -0.4
RPL28-207ENST00000558815 PRKACAP17612 351 aa12.53□□□□□ -0.4
RPL28-207ENST00000558815 SAA4P35542 130 aa12.53□□□□□ -0.4
RPL28-207ENST00000558815 SOX2P48431 317 aa12.53□□□□□ -0.4
RPL28-207ENST00000558815 ETV1P50549 477 aa12.53□□□□□ -0.4
RPL28-207ENST00000558815 EDDM3BP56851 147 aa12.53□□□□□ -0.4
RPL28-207ENST00000558815 MRPL28Q13084 256 aaKnown RBP12.53□□□□□ -0.4
RPL28-207ENST00000558815 EDDM3AQ14507 147 aa12.53□□□□□ -0.4
RPL28-207ENST00000558815 ZNF273Q14593 569 aa12.53□□□□□ -0.4
RPL28-207ENST00000558815 OR2G6Q5TZ20 316 aa12.53□□□□□ -0.4
RPL28-207ENST00000558815 RNF144BQ7Z419 303 aa12.53□□□□□ -0.4
RPL28-207ENST00000558815 PACRGLQ8N7B6 248 aa12.53□□□□□ -0.4
RPL28-207ENST00000558815 SETD9Q8NE22 299 aa12.53□□□□□ -0.4
RPL28-207ENST00000558815 SSMEM1Q8WWF3 244 aa12.53□□□□□ -0.4
RPL28-207ENST00000558815 TNFRSF14Q92956 283 aa12.53□□□□□ -0.4
RPL28-207ENST00000558815 SPSB1Q96BD6 273 aa12.53□□□□□ -0.4
RPL28-207ENST00000558815 ZCCHC4Q9H5U6 513 aa12.53□□□□□ -0.4
RPL28-207ENST00000558815 FGF20Q9NP95 211 aaPredicted RBP12.53□□□□□ -0.4
RPL28-207ENST00000558815 DHDHQ9UQ10 334 aa12.53□□□□□ -0.4
RPL28-207ENST00000558815 K7N7A8 449 aa12.52□□□□□ -0.41
RPL28-207ENST00000558815 HAND1O96004 215 aa12.52□□□□□ -0.41
RPL28-207ENST00000558815 CHRM2P08172 466 aa12.52□□□□□ -0.41
RPL28-207ENST00000558815 FBP1P09467 338 aa12.52□□□□□ -0.41
RPL28-207ENST00000558815 MDKP21741 143 aaPredicted RBP12.52□□□□□ -0.41
RPL28-207ENST00000558815 COX7A1P24310 79 aa12.52□□□□□ -0.41
RPL28-207ENST00000558815 ERVFRD-1P60508 538 aa12.52□□□□□ -0.41
RPL28-207ENST00000558815 TMEM200BQ69YZ2 307 aa12.52□□□□□ -0.41
RPL28-207ENST00000558815 ZNF782Q6ZMW2 699 aaPredicted RBP12.52□□□□□ -0.41
RPL28-207ENST00000558815 C1orf122Q6ZSJ8 110 aa12.52□□□□□ -0.41
RPL28-207ENST00000558815 GDPD3Q7L5L3 318 aa12.52□□□□□ -0.41
RPL28-207ENST00000558815 Q8IYB0 196 aa12.52□□□□□ -0.41
RPL28-207ENST00000558815 FAM58AQ8N1B3 248 aa12.52□□□□□ -0.41
RPL28-207ENST00000558815 OR5D13Q8NGL4 314 aa12.52□□□□□ -0.41
RPL28-207ENST00000558815 CHST6Q9GZX3 395 aa12.52□□□□□ -0.41
RPL28-207ENST00000558815 FAM234AQ9H0X4 552 aa12.52□□□□□ -0.41
RPL28-207ENST00000558815 UNKLQ9H9P5 680 aaKnown RBP12.52□□□□□ -0.41
RPL28-207ENST00000558815 C8orf4Q9NR00 106 aa12.52□□□□□ -0.41
RPL28-207ENST00000558815 TMEM82A0PJX8 343 aa12.51□□□□□ -0.41
RPL28-207ENST00000558815 IRGMA1A4Y4 181 aa12.51□□□□□ -0.41
RPL28-207ENST00000558815 MYL12AP19105 171 aa12.51□□□□□ -0.41
RPL28-207ENST00000558815 GABRR1P24046 479 aa12.51□□□□□ -0.41
RPL28-207ENST00000558815 DCKP27707 260 aa12.51□□□□□ -0.41
RPL28-207ENST00000558815 UBE2E1P51965 193 aa12.51□□□□□ -0.41
RPL28-207ENST00000558815 ADARB1P78563 741 aaKnown RBP12.51□□□□□ -0.41
RPL28-207ENST00000558815 PDZK1IP1Q13113 114 aa12.51□□□□□ -0.41
RPL28-207ENST00000558815 XAF1Q6GPH4 301 aa12.51□□□□□ -0.41
RPL28-207ENST00000558815 TMPRSS11AQ6ZMR5 421 aa12.51□□□□□ -0.41
RPL28-207ENST00000558815 LDLRAD3Q86YD5 345 aa12.51□□□□□ -0.41
RPL28-207ENST00000558815 TMEM86BQ8N661 226 aa12.51□□□□□ -0.41
RPL28-207ENST00000558815 ZNRD1Q9P1U0 126 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms