RNA–Protein interactions for RNA: ENST00000558544.5

TPM1-214, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 1,399 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-214ENST00000558544 OR8B3Q8NGG8 313 aa14.55□□□□□ -0.08
TPM1-214ENST00000558544 ANGPTL6Q8NI99 470 aa14.55□□□□□ -0.08
TPM1-214ENST00000558544 MSI2Q96DH6 328 aaKnown RBP14.55□□□□□ -0.08
TPM1-214ENST00000558544 NEIL1Q96FI4 390 aaPredicted RBP14.55□□□□□ -0.08
TPM1-214ENST00000558544 OR8B2Q96RD0 313 aa14.55□□□□□ -0.08
TPM1-214ENST00000558544 OR51E2Q9H255 320 aa14.55□□□□□ -0.08
TPM1-214ENST00000558544 DUX4Q9UBX2 424 aa14.55□□□□□ -0.08
TPM1-214ENST00000558544 OR14J1Q9UGF5 321 aa14.55□□□□□ -0.08
TPM1-214ENST00000558544 IGKV1D-17A0A075B6S4 117 aa14.54□□□□□ -0.08
TPM1-214ENST00000558544 NKX6-3A6NJ46 265 aa14.54□□□□□ -0.08
TPM1-214ENST00000558544 TMPRSS2O15393 492 aa14.54□□□□□ -0.08
TPM1-214ENST00000558544 NDUFA2O43678 99 aa14.54□□□□□ -0.08
TPM1-214ENST00000558544 KDM4BO94953 1096 aa14.54□□□□□ -0.08
TPM1-214ENST00000558544 CDRT1O95170 752 aa14.54□□□□□ -0.08
TPM1-214ENST00000558544 SFTPBP07988 381 aa14.54□□□□□ -0.08
TPM1-214ENST00000558544 PRKACAP17612 351 aa14.54□□□□□ -0.08
TPM1-214ENST00000558544 AMY2BP19961 511 aa14.54□□□□□ -0.08
TPM1-214ENST00000558544 PTGFRP43088 359 aa14.54□□□□□ -0.08
TPM1-214ENST00000558544 GABRA2P47869 451 aa14.54□□□□□ -0.08
TPM1-214ENST00000558544 CEBPDP49716 269 aaPredicted RBP14.54□□□□□ -0.08
TPM1-214ENST00000558544 SNU13P55769 128 aaKnown RBP14.54□□□□□ -0.08
TPM1-214ENST00000558544 ESCO2Q56NI9 601 aa14.54□□□□□ -0.08
TPM1-214ENST00000558544 CYB5R2Q6BCY4 276 aa14.54□□□□□ -0.08
TPM1-214ENST00000558544 NLRC3Q7RTR2 1065 aa14.54□□□□□ -0.08
TPM1-214ENST00000558544 FAM58AQ8N1B3 248 aa14.54□□□□□ -0.08
TPM1-214ENST00000558544 FAM216BQ8N7L0 139 aa14.54□□□□□ -0.08
TPM1-214ENST00000558544 PXT1Q8NFP0 134 aa14.54□□□□□ -0.08
TPM1-214ENST00000558544 C1orf159Q96HA4 380 aa14.54□□□□□ -0.08
TPM1-214ENST00000558544 RBM38Q9H0Z9 239 aaKnown RBP14.54□□□□□ -0.08
TPM1-214ENST00000558544 GSX1Q9H4S2 264 aaPredicted RBP14.54□□□□□ -0.08
TPM1-214ENST00000558544 CNTD2Q9H8S5 307 aa14.54□□□□□ -0.08
TPM1-214ENST00000558544 ELL3Q9HB65 397 aaPredicted RBP14.54□□□□□ -0.08
TPM1-214ENST00000558544 IL36RNQ9UBH0 155 aa14.54□□□□□ -0.08
TPM1-214ENST00000558544 ZNF222Q9UK12 451 aa14.54□□□□□ -0.08
TPM1-214ENST00000558544 CSPG4Q6UVK1 2322 aa14.54□□□□□ -0.08
TPM1-214ENST00000558544 MEGF11A6BM72 1044 aa14.53□□□□□ -0.08
TPM1-214ENST00000558544 RFPL4AA6NLU0 287 aa14.53□□□□□ -0.08
TPM1-214ENST00000558544 RFPL4AL1F8VTS6 287 aa14.53□□□□□ -0.08
TPM1-214ENST00000558544 LY6G6DO95868 133 aa14.53□□□□□ -0.08
TPM1-214ENST00000558544 GALP22466 123 aa14.53□□□□□ -0.08
TPM1-214ENST00000558544 GADD45AP24522 165 aa14.53□□□□□ -0.08
TPM1-214ENST00000558544 PITPNBP48739 271 aa14.53□□□□□ -0.08
TPM1-214ENST00000558544 SLC36A1Q7Z2H8 476 aa14.53□□□□□ -0.08
TPM1-214ENST00000558544 BIVMQ86UB2 503 aa14.53□□□□□ -0.08
TPM1-214ENST00000558544 LYPD6Q86Y78 171 aa14.53□□□□□ -0.08
TPM1-214ENST00000558544 CDH26Q8IXH8 852 aa14.53□□□□□ -0.08
TPM1-214ENST00000558544 LINC01356Q8N9X3 169 aa14.53□□□□□ -0.08
TPM1-214ENST00000558544 OR13F1Q8NGS4 319 aa14.53□□□□□ -0.08
TPM1-214ENST00000558544 OR10K1Q8NGX5 313 aa14.53□□□□□ -0.08
TPM1-214ENST00000558544 GAFA1Q96PS6 74 aa14.53□□□□□ -0.08
TPM1-214ENST00000558544 CHCHD6Q9BRQ6 235 aa14.53□□□□□ -0.08
TPM1-214ENST00000558544 SSBP3Q9BWW4 388 aaPredicted RBP14.53□□□□□ -0.08
TPM1-214ENST00000558544 DNTTIP1Q9H147 329 aa14.53□□□□□ -0.08
TPM1-214ENST00000558544 TXNL4BQ9NX01 149 aaKnown RBP14.53□□□□□ -0.08
TPM1-214ENST00000558544 KAAG1Q9UBP8 84 aa14.53□□□□□ -0.08
TPM1-214ENST00000558544 SSR3Q9UNL2 185 aa14.53□□□□□ -0.08
TPM1-214ENST00000558544 ING4Q9UNL4 249 aa14.53□□□□□ -0.08
TPM1-214ENST00000558544 AK6Q9Y3D8 172 aaKnown RBP14.53□□□□□ -0.08
TPM1-214ENST00000558544 SHISA3A0PJX4 238 aa14.52□□□□□ -0.08
TPM1-214ENST00000558544 B4DSR2 109 aa14.52□□□□□ -0.08
TPM1-214ENST00000558544 PHF1O43189 567 aaPredicted RBP14.52□□□□□ -0.08
TPM1-214ENST00000558544 CD5LO43866 347 aa14.52□□□□□ -0.08
TPM1-214ENST00000558544 KNG1P01042 644 aa14.52□□□□□ -0.08
TPM1-214ENST00000558544 SELLP14151 372 aa14.52□□□□□ -0.08
TPM1-214ENST00000558544 GNB2P62879 340 aa14.52□□□□□ -0.08
TPM1-214ENST00000558544 LCN2P80188 198 aa14.52□□□□□ -0.08
TPM1-214ENST00000558544 RSU1Q15404 277 aa14.52□□□□□ -0.08
TPM1-214ENST00000558544 ATPAF1Q5TC12 328 aaPredicted RBP14.52□□□□□ -0.08
TPM1-214ENST00000558544 GLT8D1Q68CQ7 371 aa14.52□□□□□ -0.08
TPM1-214ENST00000558544 AWAT2Q6E213 333 aa14.52□□□□□ -0.08
TPM1-214ENST00000558544 FIP1L1Q6UN15 594 aaKnown RBP14.52□□□□□ -0.08
TPM1-214ENST00000558544 CLEC9AQ6UXN8 241 aa14.52□□□□□ -0.08
TPM1-214ENST00000558544 ZNF841Q6ZN19 808 aa14.52□□□□□ -0.08
TPM1-214ENST00000558544 ZNF788Q6ZQV5 615 aa14.52□□□□□ -0.08
TPM1-214ENST00000558544 GPR141Q7Z602 305 aa14.52□□□□□ -0.08
TPM1-214ENST00000558544 CD177Q8N6Q3 437 aa14.52□□□□□ -0.08
TPM1-214ENST00000558544 OR4D6Q8NGJ1 314 aa14.52□□□□□ -0.08
TPM1-214ENST00000558544 YIPF6Q96EC8 236 aa14.52□□□□□ -0.08
TPM1-214ENST00000558544 S100A13Q99584 98 aa14.52□□□□□ -0.08
TPM1-214ENST00000558544 GFI1Q99684 422 aa14.52□□□□□ -0.08
TPM1-214ENST00000558544 HMG20AQ9NP66 347 aa14.52□□□□□ -0.08
TPM1-214ENST00000558544 CLN8Q9UBY8 286 aa14.52□□□□□ -0.08
TPM1-214ENST00000558544 METRNQ9UJH8 293 aa14.52□□□□□ -0.08
TPM1-214ENST00000558544 MRPS28Q9Y2Q9 187 aaKnown RBP14.52□□□□□ -0.08
TPM1-214ENST00000558544 WNK2Q9Y3S1 2297 aa14.52□□□□□ -0.09
TPM1-214ENST00000558544 SVEP1Q4LDE5 3571 aa14.52□□□□□ -0.09
TPM1-214ENST00000558544 LOC100506127A0A0U1RQW1 187 aa14.51□□□□□ -0.09
TPM1-214ENST00000558544 SMIM31A0A1B0GVY4 71 aa14.51□□□□□ -0.09
TPM1-214ENST00000558544 KIAA1324LA8MWY0 1029 aaPredicted RBP14.51□□□□□ -0.09
TPM1-214ENST00000558544 FCN3O75636 299 aa14.51□□□□□ -0.09
TPM1-214ENST00000558544 TGFAP01135 160 aa14.51□□□□□ -0.09
TPM1-214ENST00000558544 MSMBP08118 114 aa14.51□□□□□ -0.09
TPM1-214ENST00000558544 MYL9P24844 172 aa14.51□□□□□ -0.09
TPM1-214ENST00000558544 ZFP36P26651 326 aaKnown RBP14.51□□□□□ -0.09
TPM1-214ENST00000558544 FGF9P31371 208 aaPredicted RBP14.51□□□□□ -0.09
TPM1-214ENST00000558544 PRDX2P32119 198 aa14.51□□□□□ -0.09
TPM1-214ENST00000558544 IKZF1Q13422 519 aa14.51□□□□□ -0.09
TPM1-214ENST00000558544 WDR25Q64LD2 544 aaPredicted RBP14.51□□□□□ -0.09
TPM1-214ENST00000558544 ASCL4Q6XD76 172 aa14.51□□□□□ -0.09
TPM1-214ENST00000558544 FGFRL1Q8N441 504 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms