RNA–Protein interactions for RNA: ENST00000558218.5

USP3-207, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 3

Gene USP3, Length 717 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-207ENST00000558218 TK1P04183 234 aa8.27□□□□□ -1.09
USP3-207ENST00000558218 SELLP14151 372 aa8.27□□□□□ -1.09
USP3-207ENST00000558218 PRKACBP22694 351 aa8.27□□□□□ -1.09
USP3-207ENST00000558218 TGFBR2P37173 567 aa8.27□□□□□ -1.09
USP3-207ENST00000558218 RBP2P50120 134 aa8.27□□□□□ -1.09
USP3-207ENST00000558218 ATP1B3P54709 279 aa8.27□□□□□ -1.09
USP3-207ENST00000558218 RAG2P55895 527 aa8.27□□□□□ -1.09
USP3-207ENST00000558218 ACTA2P62736 377 aa8.27□□□□□ -1.09
USP3-207ENST00000558218 ACTG2P63267 376 aa8.27□□□□□ -1.09
USP3-207ENST00000558218 DMRTC1Q5HYR2 192 aa8.27□□□□□ -1.09
USP3-207ENST00000558218 OLFML2AQ68BL7 652 aa8.27□□□□□ -1.09
USP3-207ENST00000558218 TMEM200BQ69YZ2 307 aa8.27□□□□□ -1.09
USP3-207ENST00000558218 MKXQ8IYA7 352 aa8.27□□□□□ -1.09
USP3-207ENST00000558218 SYS1Q8N2H4 156 aa8.27□□□□□ -1.09
USP3-207ENST00000558218 PRSS35Q8N3Z0 413 aa8.27□□□□□ -1.09
USP3-207ENST00000558218 CBR4Q8N4T8 237 aa8.27□□□□□ -1.09
USP3-207ENST00000558218 BEND2Q8NDZ0 799 aa8.27□□□□□ -1.09
USP3-207ENST00000558218 OR2G2Q8NGZ5 317 aa8.27□□□□□ -1.09
USP3-207ENST00000558218 RHOXF1Q8NHV9 184 aa8.27□□□□□ -1.09
USP3-207ENST00000558218 UBE2FQ969M7 185 aa8.27□□□□□ -1.09
USP3-207ENST00000558218 RNFT2Q96EX2 444 aa8.27□□□□□ -1.09
USP3-207ENST00000558218 BORCS8Q96FH0 119 aa8.27□□□□□ -1.09
USP3-207ENST00000558218 CEP19Q96LK0 163 aa8.27□□□□□ -1.09
USP3-207ENST00000558218 MEGF9Q9H1U4 602 aa8.27□□□□□ -1.09
USP3-207ENST00000558218 RHOFQ9HBH0 211 aa8.27□□□□□ -1.09
USP3-207ENST00000558218 NEK6Q9HC98 313 aa8.27□□□□□ -1.09
USP3-207ENST00000558218 SIRT7Q9NRC8 400 aa8.27□□□□□ -1.09
USP3-207ENST00000558218 INPP5EQ9NRR6 644 aa8.27□□□□□ -1.09
USP3-207ENST00000558218 MRPS18AQ9NVS2 196 aaKnown RBP8.27□□□□□ -1.09
USP3-207ENST00000558218 ZNRD1Q9P1U0 126 aa8.27□□□□□ -1.09
USP3-207ENST00000558218 GNG8Q9UK08 70 aa8.27□□□□□ -1.09
USP3-207ENST00000558218 FAM230AA0A1W2PPH8 454 aa8.26□□□□□ -1.09
USP3-207ENST00000558218 MEIOCA2RUB1 952 aa8.26□□□□□ -1.09
USP3-207ENST00000558218 GPR137BO60478 399 aa8.26□□□□□ -1.09
USP3-207ENST00000558218 FADS2O95864 444 aaKnown RBP8.26□□□□□ -1.09
USP3-207ENST00000558218 IGHV4-59P01825 116 aa8.26□□□□□ -1.09
USP3-207ENST00000558218 RBP4P02753 201 aa8.26□□□□□ -1.09
USP3-207ENST00000558218 GABRB1P18505 474 aa8.26□□□□□ -1.09
USP3-207ENST00000558218 MDKP21741 143 aaPredicted RBP8.26□□□□□ -1.09
USP3-207ENST00000558218 CAPZA1P52907 286 aa8.26□□□□□ -1.09
USP3-207ENST00000558218 MEF2CQ06413 473 aaPredicted RBP8.26□□□□□ -1.09
USP3-207ENST00000558218 GALEQ14376 348 aa8.26□□□□□ -1.09
USP3-207ENST00000558218 TP53I3Q53FA7 332 aa8.26□□□□□ -1.09
USP3-207ENST00000558218 C17orf107Q6ZR85 190 aa8.26□□□□□ -1.09
USP3-207ENST00000558218 ZBTB49Q6ZSB9 765 aa8.26□□□□□ -1.09
USP3-207ENST00000558218 ANGPTL5Q86XS5 388 aa8.26□□□□□ -1.09
USP3-207ENST00000558218 FAM185AQ8N0U4 392 aa8.26□□□□□ -1.09
USP3-207ENST00000558218 C11orf42Q8N5U0 333 aa8.26□□□□□ -1.09
USP3-207ENST00000558218 ZSCAN4Q8NAM6 433 aaPredicted RBP8.26□□□□□ -1.09
USP3-207ENST00000558218 SPSB1Q96BD6 273 aa8.26□□□□□ -1.09
USP3-207ENST00000558218 RDH12Q96NR8 316 aa8.26□□□□□ -1.09
USP3-207ENST00000558218 MBOAT4Q96T53 435 aa8.26□□□□□ -1.09
USP3-207ENST00000558218 C16orf95Q9H693 158 aa8.26□□□□□ -1.09
USP3-207ENST00000558218 S100A14Q9HCY8 104 aa8.26□□□□□ -1.09
USP3-207ENST00000558218 MTCH1Q9NZJ7 389 aa8.26□□□□□ -1.09
USP3-207ENST00000558218 VPREB3Q9UKI3 123 aa8.26□□□□□ -1.09
USP3-207ENST00000558218 HHLA2Q9UM44 414 aa8.26□□□□□ -1.09
USP3-207ENST00000558218 GMPPBQ9Y5P6 360 aa8.26□□□□□ -1.09
USP3-207ENST00000558218 LOC100130705A0A1B0GUX0 176 aa8.25□□□□□ -1.09
USP3-207ENST00000558218 LOC107986453A0A1B0GWG9 222 aa8.25□□□□□ -1.09
USP3-207ENST00000558218 A6NIN4 97 aa8.25□□□□□ -1.09
USP3-207ENST00000558218 C17orf98A8MV24 154 aa8.25□□□□□ -1.09
USP3-207ENST00000558218 ZNF737O75373 536 aa8.25□□□□□ -1.09
USP3-207ENST00000558218 TSPAN9O75954 239 aa8.25□□□□□ -1.09
USP3-207ENST00000558218 CLPXO76031 633 aa8.25□□□□□ -1.09
USP3-207ENST00000558218 APOL3O95236 402 aa8.25□□□□□ -1.09
USP3-207ENST00000558218 MT-ND2P03891 347 aa8.25□□□□□ -1.09
USP3-207ENST00000558218 HTR1AP08908 422 aa8.25□□□□□ -1.09
USP3-207ENST00000558218 ATF1P18846 271 aa8.25□□□□□ -1.09
USP3-207ENST00000558218 SAA4P35542 130 aa8.25□□□□□ -1.09
USP3-207ENST00000558218 KIR3DL2P43630 455 aa8.25□□□□□ -1.09
USP3-207ENST00000558218 MTCP1P56278 107 aa8.25□□□□□ -1.09
USP3-207ENST00000558218 OR12D2P58182 307 aa8.25□□□□□ -1.09
USP3-207ENST00000558218 ERVFRD-1P60508 538 aa8.25□□□□□ -1.09
USP3-207ENST00000558218 RAB40BQ12829 278 aa8.25□□□□□ -1.09
USP3-207ENST00000558218 ODF4Q2M2E3 257 aa8.25□□□□□ -1.09
USP3-207ENST00000558218 ZIK1Q3SY52 487 aaPredicted RBP8.25□□□□□ -1.09
USP3-207ENST00000558218 KLHL22Q53GT1 634 aa8.25□□□□□ -1.09
USP3-207ENST00000558218 LPCAT4Q643R3 524 aa8.25□□□□□ -1.09
USP3-207ENST00000558218 HCP5Q6MZN7 132 aa8.25□□□□□ -1.09
USP3-207ENST00000558218 LHFPL2Q6ZUX7 228 aa8.25□□□□□ -1.09
USP3-207ENST00000558218 PDZD9Q8IXQ8 264 aa8.25□□□□□ -1.09
USP3-207ENST00000558218 PQLC1Q8N2U9 271 aa8.25□□□□□ -1.09
USP3-207ENST00000558218 PPP1R35Q8TAP8 253 aa8.25□□□□□ -1.09
USP3-207ENST00000558218 SNX22Q96L94 193 aa8.25□□□□□ -1.09
USP3-207ENST00000558218 ZNF488Q96MN9 340 aa8.25□□□□□ -1.09
USP3-207ENST00000558218 CDCA4Q9BXL8 241 aa8.25□□□□□ -1.09
USP3-207ENST00000558218 C8orf4Q9NR00 106 aa8.25□□□□□ -1.09
USP3-207ENST00000558218 C19orf12Q9NSK7 152 aa8.25□□□□□ -1.09
USP3-207ENST00000558218 GLS2Q9UI32 602 aa8.25□□□□□ -1.09
USP3-207ENST00000558218 RPL36Q9Y3U8 105 aaKnown RBP8.25□□□□□ -1.09
USP3-207ENST00000558218 ANK2Q01484 3957 aa8.25□□□□□ -1.09
USP3-207ENST00000558218 IGKV1-27A0A075B6S5 117 aa8.24□□□□□ -1.09
USP3-207ENST00000558218 TRBV2A0A0J9YWF9 115 aa8.24□□□□□ -1.09
USP3-207ENST00000558218 OR4C45A6NMZ5 311 aa8.24□□□□□ -1.09
USP3-207ENST00000558218 TFF1P04155 84 aa8.24□□□□□ -1.09
USP3-207ENST00000558218 DBTP11182 482 aaKnown RBP8.24□□□□□ -1.09
USP3-207ENST00000558218 OMGP23515 440 aa8.24□□□□□ -1.09
USP3-207ENST00000558218 LGALS4P56470 323 aa8.24□□□□□ -1.09
USP3-207ENST00000558218 NANOS3P60323 173 aaKnown RBP8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms