RNA–Protein interactions for RNA: ENST00000558190.5

ATXN3-248, Transcript of ataxin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATXN3, Length 26,812 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-248ENST00000558190 HCRTR1O43613 425 aa3.28□□□□□ -1.88
ATXN3-248ENST00000558190 LAG3P18627 525 aa3.28□□□□□ -1.88
ATXN3-248ENST00000558190 SP3Q02447 781 aa3.28□□□□□ -1.88
ATXN3-248ENST00000558190 MZT1Q08AG7 82 aa3.28□□□□□ -1.88
ATXN3-248ENST00000558190 IGHEP01854 428 aa3.28□□□□□ -1.88
ATXN3-248ENST00000558190 COL10A1Q03692 680 aa3.28□□□□□ -1.88
ATXN3-248ENST00000558190 PRSS53Q2L4Q9 553 aa3.28□□□□□ -1.88
ATXN3-248ENST00000558190 HES3Q5TGS1 186 aa3.28□□□□□ -1.88
ATXN3-248ENST00000558190 SLC25A34Q6PIV7 304 aa3.28□□□□□ -1.88
ATXN3-248ENST00000558190 ARHGEF12Q9NZN5 1544 aa3.28□□□□□ -1.88
ATXN3-248ENST00000558190 C8AP07357 584 aa3.28□□□□□ -1.88
ATXN3-248ENST00000558190 TMEM252Q8N6L7 170 aa3.28□□□□□ -1.88
ATXN3-248ENST00000558190 TMEM204Q9BSN7 226 aa3.28□□□□□ -1.88
ATXN3-248ENST00000558190 JKAMPQ9P055 326 aa3.28□□□□□ -1.88
ATXN3-248ENST00000558190 LOC107984156A0A0G2JMH3 177 aa3.28□□□□□ -1.88
ATXN3-248ENST00000558190 PIN1P1O15428 100 aa3.28□□□□□ -1.88
ATXN3-248ENST00000558190 RPL34P49207 117 aaKnown RBP3.28□□□□□ -1.88
ATXN3-248ENST00000558190 ARL17AQ8IVW1 177 aa3.28□□□□□ -1.88
ATXN3-248ENST00000558190 EIF4E2O60573 245 aaKnown RBP3.28□□□□□ -1.88
ATXN3-248ENST00000558190 ARRDC3Q96B67 414 aa3.28□□□□□ -1.88
ATXN3-248ENST00000558190 LYRM4Q9HD34 91 aa3.28□□□□□ -1.88
ATXN3-248ENST00000558190 CES1P1Q9UKY3 287 aa3.28□□□□□ -1.88
ATXN3-248ENST00000558190 MCTS1Q9ULC4 181 aaKnown RBP3.28□□□□□ -1.88
ATXN3-248ENST00000558190 MELTFP08582 738 aa3.28□□□□□ -1.88
ATXN3-248ENST00000558190 RCC1P18754 421 aaPredicted RBP3.28□□□□□ -1.88
ATXN3-248ENST00000558190 DTYMKP23919 212 aa3.28□□□□□ -1.88
ATXN3-248ENST00000558190 RELQ04864 619 aaPredicted RBP3.28□□□□□ -1.88
ATXN3-248ENST00000558190 C1orf194Q5T5A4 169 aa3.28□□□□□ -1.88
ATXN3-248ENST00000558190 FAM169BQ8N8A8 192 aa3.28□□□□□ -1.88
ATXN3-248ENST00000558190 OR1F12Q8NHA8 337 aa3.28□□□□□ -1.88
ATXN3-248ENST00000558190 ADAMTS18Q8TE60 1221 aa3.28□□□□□ -1.88
ATXN3-248ENST00000558190 ACACAQ13085 2346 aa3.28□□□□□ -1.88
ATXN3-248ENST00000558190 A0A1B0GWB2 263 aa3.28□□□□□ -1.88
ATXN3-248ENST00000558190 STARD6P59095 220 aa3.28□□□□□ -1.88
ATXN3-248ENST00000558190 RPEL1Q2QD12 228 aa3.28□□□□□ -1.88
ATXN3-248ENST00000558190 TMEM183BQ1AE95 376 aa3.28□□□□□ -1.88
ATXN3-248ENST00000558190 H3BNC9 293 aa3.28□□□□□ -1.88
ATXN3-248ENST00000558190 MYOGP15173 224 aa3.28□□□□□ -1.88
ATXN3-248ENST00000558190 OR5AS1Q8N127 324 aa3.28□□□□□ -1.88
ATXN3-248ENST00000558190 NDUFAF3Q9BU61 184 aa3.28□□□□□ -1.88
ATXN3-248ENST00000558190 TEX14Q8IWB6 1497 aa3.28□□□□□ -1.88
ATXN3-248ENST00000558190 LOC390937A0A1W2PQ73 354 aa3.28□□□□□ -1.88
ATXN3-248ENST00000558190 SMPD2O60906 423 aa3.28□□□□□ -1.88
ATXN3-248ENST00000558190 ATOH7Q8N100 152 aa3.28□□□□□ -1.88
ATXN3-248ENST00000558190 MBD3L1Q8WWY6 194 aa3.28□□□□□ -1.88
ATXN3-248ENST00000558190 C7orf66A4D0T2 115 aa3.28□□□□□ -1.88
ATXN3-248ENST00000558190 FCGR3AP08637 254 aa3.28□□□□□ -1.88
ATXN3-248ENST00000558190 MPZP25189 248 aa3.28□□□□□ -1.88
ATXN3-248ENST00000558190 ELOBQ15370 118 aa3.28□□□□□ -1.88
ATXN3-248ENST00000558190 SHHQ15465 462 aa3.28□□□□□ -1.88
ATXN3-248ENST00000558190 HNRNPA1L2Q32P51 320 aaKnown RBP3.28□□□□□ -1.88
ATXN3-248ENST00000558190 PECRQ9BY49 303 aa3.28□□□□□ -1.88
ATXN3-248ENST00000558190 CFAP43Q8NDM7 1665 aa3.28□□□□□ -1.88
ATXN3-248ENST00000558190 SERPINE3A8MV23 424 aa3.28□□□□□ -1.88
ATXN3-248ENST00000558190 PTGESO14684 152 aa3.28□□□□□ -1.88
ATXN3-248ENST00000558190 GAGE2BQ13066 116 aa3.28□□□□□ -1.88
ATXN3-248ENST00000558190 KISS1Q15726 138 aa3.28□□□□□ -1.88
ATXN3-248ENST00000558190 GAGE2EQ4V326 116 aa3.28□□□□□ -1.88
ATXN3-248ENST00000558190 GAGE2DQ9UEU5 116 aa3.28□□□□□ -1.88
ATXN3-248ENST00000558190 STARD10Q9Y365 291 aa3.28□□□□□ -1.88
ATXN3-248ENST00000558190 A0A1W2PPC1 479 aa3.28□□□□□ -1.88
ATXN3-248ENST00000558190 THBS4P35443 961 aa3.28□□□□□ -1.88
ATXN3-248ENST00000558190 UBTD2Q8WUN7 234 aa3.28□□□□□ -1.88
ATXN3-248ENST00000558190 CDC42EP3Q9UKI2 254 aa3.28□□□□□ -1.88
ATXN3-248ENST00000558190 LAMC1P11047 1609 aa3.28□□□□□ -1.89
ATXN3-248ENST00000558190 C2orf88Q9BSF0 95 aa3.28□□□□□ -1.89
ATXN3-248ENST00000558190 NCOR1P1Q9H4R4 102 aa3.28□□□□□ -1.89
ATXN3-248ENST00000558190 ZNF257Q9Y2Q1 563 aa3.28□□□□□ -1.89
ATXN3-248ENST00000558190 CROCCQ5TZA2 2017 aa3.28□□□□□ -1.89
ATXN3-248ENST00000558190 DEDDO75618 318 aa3.28□□□□□ -1.89
ATXN3-248ENST00000558190 VAMP5O95183 116 aa3.28□□□□□ -1.89
ATXN3-248ENST00000558190 APOBEC1P41238 236 aaKnown RBP3.28□□□□□ -1.89
ATXN3-248ENST00000558190 Q1RN00 199 aa3.28□□□□□ -1.89
ATXN3-248ENST00000558190 OR4P4Q8NGL7 312 aa3.28□□□□□ -1.89
ATXN3-248ENST00000558190 RTBDNQ9BSG5 229 aaPredicted RBP3.28□□□□□ -1.89
ATXN3-248ENST00000558190 SLC22A20A6NK97 555 aa3.27□□□□□ -1.89
ATXN3-248ENST00000558190 HOXC12P31275 282 aa3.27□□□□□ -1.89
ATXN3-248ENST00000558190 MS4A8Q9BY19 250 aa3.27□□□□□ -1.89
ATXN3-248ENST00000558190 ICAM5Q9UMF0 924 aa3.27□□□□□ -1.89
ATXN3-248ENST00000558190 A0A087WUJ7 227 aa3.27□□□□□ -1.89
ATXN3-248ENST00000558190 OR5B21A6NL26 309 aa3.27□□□□□ -1.89
ATXN3-248ENST00000558190 NDUFA2O43678 99 aa3.27□□□□□ -1.89
ATXN3-248ENST00000558190 ORM2P19652 201 aa3.27□□□□□ -1.89
ATXN3-248ENST00000558190 GCSHP23434 173 aa3.27□□□□□ -1.89
ATXN3-248ENST00000558190 ZNF137PP52743 207 aa3.27□□□□□ -1.89
ATXN3-248ENST00000558190 NUTF2P61970 127 aaKnown RBP3.27□□□□□ -1.89
ATXN3-248ENST00000558190 ZNF117Q03924 483 aa3.27□□□□□ -1.89
ATXN3-248ENST00000558190 THSD4Q6ZMP0 1018 aa3.27□□□□□ -1.89
ATXN3-248ENST00000558190 GKN2Q86XP6 184 aa3.27□□□□□ -1.89
ATXN3-248ENST00000558190 OR8A1Q8NGG7 326 aa3.27□□□□□ -1.89
ATXN3-248ENST00000558190 A1L4Q6 167 aa3.27□□□□□ -1.89
ATXN3-248ENST00000558190 PNRC1Q12796 327 aaPredicted RBP3.27□□□□□ -1.89
ATXN3-248ENST00000558190 PLGLAQ15195 96 aa3.27□□□□□ -1.89
ATXN3-248ENST00000558190 SCGB1D4Q6XE38 83 aa3.27□□□□□ -1.89
ATXN3-248ENST00000558190 MYEOVQ96EZ4 313 aa3.27□□□□□ -1.89
ATXN3-248ENST00000558190 CACNG5Q9UF02 275 aa3.27□□□□□ -1.89
ATXN3-248ENST00000558190 SLC17A3O00476 420 aa3.27□□□□□ -1.89
ATXN3-248ENST00000558190 RAMP1O60894 148 aa3.27□□□□□ -1.89
ATXN3-248ENST00000558190 ERGP11308 486 aa3.27□□□□□ -1.89
ATXN3-248ENST00000558190 HIKESHIQ53FT3 197 aa3.27□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms