RNA–Protein interactions for RNA: ENST00000558040.5

SNX1-203, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 774 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-203ENST00000558040 PLEKHF2Q9H8W4 249 aa14.24□□□□□ -0.13
SNX1-203ENST00000558040 RNF7Q9UBF6 113 aa14.24□□□□□ -0.13
SNX1-203ENST00000558040 ST3GAL6Q9Y274 331 aa14.24□□□□□ -0.13
SNX1-203ENST00000558040 NPTNQ9Y639 398 aa14.24□□□□□ -0.13
SNX1-203ENST00000558040 FAM90A10PA6NDY2 464 aa14.23□□□□□ -0.13
SNX1-203ENST00000558040 FAM90A18PA6NE21 464 aa14.23□□□□□ -0.13
SNX1-203ENST00000558040 FAM90A16PA6NEW6 464 aa14.23□□□□□ -0.13
SNX1-203ENST00000558040 FAM90A20PA6NIJ5 464 aa14.23□□□□□ -0.13
SNX1-203ENST00000558040 FAM90A8PA6NJQ4 464 aa14.23□□□□□ -0.13
SNX1-203ENST00000558040 FAM90A7PA6NKC0 464 aa14.23□□□□□ -0.13
SNX1-203ENST00000558040 FAM90A22PA8MWA6 464 aa14.23□□□□□ -0.13
SNX1-203ENST00000558040 FAM90A12PA8MX19 464 aa14.23□□□□□ -0.13
SNX1-203ENST00000558040 FAM90A5PA8MXJ8 464 aa14.23□□□□□ -0.13
SNX1-203ENST00000558040 FAM90A23PA8MXZ1 464 aa14.23□□□□□ -0.13
SNX1-203ENST00000558040 H7C417 338 aa14.23□□□□□ -0.13
SNX1-203ENST00000558040 INHBBP09529 407 aa14.23□□□□□ -0.13
SNX1-203ENST00000558040 FAM90A15PP0C7V4 464 aa14.23□□□□□ -0.13
SNX1-203ENST00000558040 FAM90A13PP0C7W8 464 aa14.23□□□□□ -0.13
SNX1-203ENST00000558040 FAM90A14PP0C7W9 464 aa14.23□□□□□ -0.13
SNX1-203ENST00000558040 FAM90A24PP0C7X0 464 aa14.23□□□□□ -0.13
SNX1-203ENST00000558040 VEGFCP49767 419 aa14.23□□□□□ -0.13
SNX1-203ENST00000558040 IL13RA2Q14627 380 aa14.23□□□□□ -0.13
SNX1-203ENST00000558040 ZNF181Q2M3W8 571 aa14.23□□□□□ -0.13
SNX1-203ENST00000558040 SMIM21Q3B7S5 101 aa14.23□□□□□ -0.13
SNX1-203ENST00000558040 PIGYQ3MUY2 71 aa14.23□□□□□ -0.13
SNX1-203ENST00000558040 PYHIN1Q6K0P9 492 aa14.23□□□□□ -0.13
SNX1-203ENST00000558040 C1orf87Q8N0U7 546 aa14.23□□□□□ -0.13
SNX1-203ENST00000558040 BATF2Q8N1L9 274 aa14.23□□□□□ -0.13
SNX1-203ENST00000558040 FAM89BQ8N5H3 189 aa14.23□□□□□ -0.13
SNX1-203ENST00000558040 OR10R2Q8NGX6 335 aa14.23□□□□□ -0.13
SNX1-203ENST00000558040 NEU4Q8WWR8 484 aaPredicted RBP14.23□□□□□ -0.13
SNX1-203ENST00000558040 PSMG3-AS1Q96PY0 264 aa14.23□□□□□ -0.13
SNX1-203ENST00000558040 NICN1Q9BSH3 213 aa14.23□□□□□ -0.13
SNX1-203ENST00000558040 HES4Q9HCC6 221 aa14.23□□□□□ -0.13
SNX1-203ENST00000558040 GLS2Q9UI32 602 aa14.23□□□□□ -0.13
SNX1-203ENST00000558040 V9GYH0 126 aa14.23□□□□□ -0.13
SNX1-203ENST00000558040 RAI1Q7Z5J4 1906 aaPredicted RBP14.23□□□□□ -0.13
SNX1-203ENST00000558040 SRRM5B3KS81 715 aa14.22□□□□□ -0.13
SNX1-203ENST00000558040 F8VVB4 439 aa14.22□□□□□ -0.13
SNX1-203ENST00000558040 F8VWA3 439 aa14.22□□□□□ -0.13
SNX1-203ENST00000558040 GABRR1P24046 479 aa14.22□□□□□ -0.13
SNX1-203ENST00000558040 PMELP40967 661 aa14.22□□□□□ -0.13
SNX1-203ENST00000558040 MNDAP41218 407 aa14.22□□□□□ -0.13
SNX1-203ENST00000558040 TAS2R20P59543 309 aa14.22□□□□□ -0.13
SNX1-203ENST00000558040 ARL6IP1Q15041 203 aa14.22□□□□□ -0.13
SNX1-203ENST00000558040 MPV17LQ2QL34 196 aa14.22□□□□□ -0.13
SNX1-203ENST00000558040 SPIN3Q5JUX0 258 aa14.22□□□□□ -0.13
SNX1-203ENST00000558040 BIVMQ86UB2 503 aa14.22□□□□□ -0.13
SNX1-203ENST00000558040 FAM90A1Q86YD7 464 aa14.22□□□□□ -0.13
SNX1-203ENST00000558040 SOSTQ9BQB4 213 aa14.22□□□□□ -0.13
SNX1-203ENST00000558040 MRPS7Q9Y2R9 242 aaKnown RBP14.22□□□□□ -0.13
SNX1-203ENST00000558040 TRAV18A0A075B6X5 111 aa14.21□□□□□ -0.13
SNX1-203ENST00000558040 IGHV1-69-2A0A0G2JMI3 117 aa14.21□□□□□ -0.13
SNX1-203ENST00000558040 RAB27BO00194 218 aa14.21□□□□□ -0.13
SNX1-203ENST00000558040 GEMIN2O14893 280 aaKnown RBP14.21□□□□□ -0.13
SNX1-203ENST00000558040 LHBP01229 141 aa14.21□□□□□ -0.13
SNX1-203ENST00000558040 HPXP02790 462 aa14.21□□□□□ -0.13
SNX1-203ENST00000558040 CD40LGP29965 261 aa14.21□□□□□ -0.13
SNX1-203ENST00000558040 BLVRBP30043 206 aaPredicted RBP14.21□□□□□ -0.13
SNX1-203ENST00000558040 SSTR2P30874 369 aa14.21□□□□□ -0.13
SNX1-203ENST00000558040 SNU13P55769 128 aaKnown RBP14.21□□□□□ -0.13
SNX1-203ENST00000558040 GMFBP60983 142 aa14.21□□□□□ -0.13
SNX1-203ENST00000558040 TAF9Q16594 264 aa14.21□□□□□ -0.13
SNX1-203ENST00000558040 ACP7Q6ZNF0 438 aa14.21□□□□□ -0.13
SNX1-203ENST00000558040 IZUMO1Q8IYV9 350 aa14.21□□□□□ -0.13
SNX1-203ENST00000558040 GCSAMQ8N6F7 178 aa14.21□□□□□ -0.13
SNX1-203ENST00000558040 DTX3Q8N9I9 347 aa14.21□□□□□ -0.13
SNX1-203ENST00000558040 CHST4Q8NCG5 386 aa14.21□□□□□ -0.13
SNX1-203ENST00000558040 RAB3CQ96E17 227 aa14.21□□□□□ -0.13
SNX1-203ENST00000558040 NEDD4LQ96PU5 975 aa14.21□□□□□ -0.13
SNX1-203ENST00000558040 DNAJB11Q9UBS4 358 aa14.21□□□□□ -0.13
SNX1-203ENST00000558040 ABCA4P78363 2273 aa14.21□□□□□ -0.14
SNX1-203ENST00000558040 ICE1Q9Y2F5 2266 aa14.21□□□□□ -0.14
SNX1-203ENST00000558040 ROS1P08922 2347 aa14.2□□□□□ -0.14
SNX1-203ENST00000558040 A0A0A6YYD4 124 aa14.2□□□□□ -0.14
SNX1-203ENST00000558040 A0A0G2JMP0 313 aa14.2□□□□□ -0.14
SNX1-203ENST00000558040 A0A0X1KG70 313 aa14.2□□□□□ -0.14
SNX1-203ENST00000558040 WNT9BO14905 357 aa14.2□□□□□ -0.14
SNX1-203ENST00000558040 SOCS1O15524 211 aa14.2□□□□□ -0.14
SNX1-203ENST00000558040 OR7C1O76099 320 aaPredicted RBP14.2□□□□□ -0.14
SNX1-203ENST00000558040 KNG1P01042 644 aa14.2□□□□□ -0.14
SNX1-203ENST00000558040 PPP5CP53041 499 aa14.2□□□□□ -0.14
SNX1-203ENST00000558040 MRPS10P82664 201 aaKnown RBP14.2□□□□□ -0.14
SNX1-203ENST00000558040 MRPS11P82912 194 aaKnown RBP14.2□□□□□ -0.14
SNX1-203ENST00000558040 IKZF1Q13422 519 aa14.2□□□□□ -0.14
SNX1-203ENST00000558040 MADCAM1Q13477 382 aa14.2□□□□□ -0.14
SNX1-203ENST00000558040 ZNF146Q15072 292 aa14.2□□□□□ -0.14
SNX1-203ENST00000558040 HFEQ30201 348 aa14.2□□□□□ -0.14
SNX1-203ENST00000558040 MOGAT2Q3SYC2 334 aa14.2□□□□□ -0.14
SNX1-203ENST00000558040 PYDC2Q56P42 97 aa14.2□□□□□ -0.14
SNX1-203ENST00000558040 ZNF295-AS1Q8N0V1 137 aa14.2□□□□□ -0.14
SNX1-203ENST00000558040 BOLLQ8N9W6 283 aaKnown RBP14.2□□□□□ -0.14
SNX1-203ENST00000558040 OR4M2Q8NGB6 313 aa14.2□□□□□ -0.14
SNX1-203ENST00000558040 CCL17Q92583 94 aa14.2□□□□□ -0.14
SNX1-203ENST00000558040 CCL19Q99731 98 aa14.2□□□□□ -0.14
SNX1-203ENST00000558040 SPACA1Q9HBV2 294 aa14.2□□□□□ -0.14
SNX1-203ENST00000558040 DLL4Q9NR61 685 aa14.2□□□□□ -0.14
SNX1-203ENST00000558040 TMEM106BQ9NUM4 274 aa14.2□□□□□ -0.14
SNX1-203ENST00000558040 ARFGEF3Q5TH69 2177 aa14.2□□□□□ -0.14
SNX1-203ENST00000558040 SH2D1BO14796 132 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms