RNA–Protein interactions for RNA: ENST00000557658.5

VIPAS39-211, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIPAS39, Length 2,562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-211ENST00000557658 OR52M1Q8NGK5 317 aa10.3□□□□□ -0.76
VIPAS39-211ENST00000557658 GPR173Q9NS66 373 aa10.3□□□□□ -0.76
VIPAS39-211ENST00000557658 PUS1Q9Y606 427 aaKnown RBP eCLIP10.3□□□□□ -0.76
VIPAS39-211ENST00000557658 A0A1B0GV50 99 aa10.3□□□□□ -0.76
VIPAS39-211ENST00000557658 SHISA7A6NL88 538 aa10.3□□□□□ -0.76
VIPAS39-211ENST00000557658 M0R135 149 aa10.3□□□□□ -0.76
VIPAS39-211ENST00000557658 FBP1P09467 338 aa10.3□□□□□ -0.76
VIPAS39-211ENST00000557658 KLK2P20151 261 aa10.3□□□□□ -0.76
VIPAS39-211ENST00000557658 FKBP2P26885 142 aaKnown RBP10.3□□□□□ -0.76
VIPAS39-211ENST00000557658 AFF3P51826 1226 aaKnown RBP10.3□□□□□ -0.76
VIPAS39-211ENST00000557658 ENDOGQ14249 297 aaKnown RBP10.3□□□□□ -0.76
VIPAS39-211ENST00000557658 TSPO2Q5TGU0 170 aa10.3□□□□□ -0.76
VIPAS39-211ENST00000557658 HEPN1Q6WQI6 88 aa10.3□□□□□ -0.76
VIPAS39-211ENST00000557658 DTX1Q86Y01 620 aa10.3□□□□□ -0.76
VIPAS39-211ENST00000557658 WDSUB1Q8N9V3 476 aa10.3□□□□□ -0.76
VIPAS39-211ENST00000557658 OR5L1Q8NGL2 311 aa10.3□□□□□ -0.76
VIPAS39-211ENST00000557658 SPSB1Q96BD6 273 aa10.3□□□□□ -0.76
VIPAS39-211ENST00000557658 ZNF799Q96GE5 643 aa10.3□□□□□ -0.76
VIPAS39-211ENST00000557658 ANGPTL4Q9BY76 406 aa10.3□□□□□ -0.76
VIPAS39-211ENST00000557658 UNKLQ9H9P5 680 aaKnown RBP10.3□□□□□ -0.76
VIPAS39-211ENST00000557658 SLC2A9Q9NRM0 540 aa10.3□□□□□ -0.76
VIPAS39-211ENST00000557658 IGLV3-12A0A075B6K2 115 aa10.29□□□□□ -0.76
VIPAS39-211ENST00000557658 PPIHO43447 177 aaKnown RBP10.29□□□□□ -0.76
VIPAS39-211ENST00000557658 NCMAPQ5T1S8 102 aa10.29□□□□□ -0.76
VIPAS39-211ENST00000557658 C10orf128Q5T292 105 aa10.29□□□□□ -0.76
VIPAS39-211ENST00000557658 RHBDD2Q6NTF9 364 aa10.29□□□□□ -0.76
VIPAS39-211ENST00000557658 EDARADDQ8WWZ3 215 aa10.29□□□□□ -0.76
VIPAS39-211ENST00000557658 SPTSSAQ969W0 71 aa10.29□□□□□ -0.76
VIPAS39-211ENST00000557658 MSI2Q96DH6 328 aaKnown RBP10.29□□□□□ -0.76
VIPAS39-211ENST00000557658 TOLLIPQ9H0E2 274 aa10.29□□□□□ -0.76
VIPAS39-211ENST00000557658 TMED3Q9Y3Q3 217 aa10.29□□□□□ -0.76
VIPAS39-211ENST00000557658 MED19A0JLT2 244 aaPredicted RBP10.29□□□□□ -0.76
VIPAS39-211ENST00000557658 WRBO00258 174 aa10.29□□□□□ -0.76
VIPAS39-211ENST00000557658 GATCO43716 136 aaKnown RBP10.29□□□□□ -0.76
VIPAS39-211ENST00000557658 ANGPTL7O43827 346 aa10.29□□□□□ -0.76
VIPAS39-211ENST00000557658 ZFAND5O76080 213 aa10.29□□□□□ -0.76
VIPAS39-211ENST00000557658 ZNF205O95201 554 aa10.29□□□□□ -0.76
VIPAS39-211ENST00000557658 OTX1P32242 354 aaPredicted RBP10.29□□□□□ -0.76
VIPAS39-211ENST00000557658 KIAA0141Q14154 515 aaPredicted RBP10.29□□□□□ -0.76
VIPAS39-211ENST00000557658 SHHQ15465 462 aa10.29□□□□□ -0.76
VIPAS39-211ENST00000557658 RSPO1Q2MKA7 263 aaPredicted RBP10.29□□□□□ -0.76
VIPAS39-211ENST00000557658 SYT13Q7L8C5 426 aa10.29□□□□□ -0.76
VIPAS39-211ENST00000557658 CCDC71LQ8N9Z2 235 aa10.29□□□□□ -0.76
VIPAS39-211ENST00000557658 REEP6Q96HR9 211 aa10.29□□□□□ -0.76
VIPAS39-211ENST00000557658 YPEL4Q96NS1 127 aa10.29□□□□□ -0.76
VIPAS39-211ENST00000557658 B3GALT1Q9Y5Z6 326 aa10.29□□□□□ -0.76
VIPAS39-211ENST00000557658 MED12Q93074 2177 aa10.29□□□□□ -0.76
VIPAS39-211ENST00000557658 PHF1O43189 567 aaPredicted RBP10.28□□□□□ -0.76
VIPAS39-211ENST00000557658 OR2J2O76002 312 aa10.28□□□□□ -0.76
VIPAS39-211ENST00000557658 GLI4P10075 376 aa10.28□□□□□ -0.76
VIPAS39-211ENST00000557658 RPS10P46783 165 aaKnown RBP10.28□□□□□ -0.76
VIPAS39-211ENST00000557658 HTR5AP47898 357 aa10.28□□□□□ -0.76
VIPAS39-211ENST00000557658 HIST1H3AP68431 136 aa10.28□□□□□ -0.76
VIPAS39-211ENST00000557658 EWSR1Q01844 656 aaKnown RBP eCLIP10.28□□□□□ -0.76
VIPAS39-211ENST00000557658 ZNF266Q14584 549 aa10.28□□□□□ -0.76
VIPAS39-211ENST00000557658 HIST2H3PS2Q5TEC6 136 aa10.28□□□□□ -0.76
VIPAS39-211ENST00000557658 SLC22A25Q6T423 547 aa10.28□□□□□ -0.76
VIPAS39-211ENST00000557658 RABEPKQ7Z6M1 372 aa10.28□□□□□ -0.76
VIPAS39-211ENST00000557658 AKR7LQ8NHP1 331 aa10.28□□□□□ -0.76
VIPAS39-211ENST00000557658 PLEK2Q9NYT0 353 aa10.28□□□□□ -0.76
VIPAS39-211ENST00000557658 MYOTQ9UBF9 498 aa10.28□□□□□ -0.76
VIPAS39-211ENST00000557658 FAM230AA0A1W2PPH8 454 aa10.28□□□□□ -0.76
VIPAS39-211ENST00000557658 RBFOX3A6NFN3 312 aa10.28□□□□□ -0.76
VIPAS39-211ENST00000557658 SPRY1O43609 319 aaPredicted RBP10.28□□□□□ -0.76
VIPAS39-211ENST00000557658 PIAS2O75928 621 aa10.28□□□□□ -0.76
VIPAS39-211ENST00000557658 DBHP09172 617 aa10.28□□□□□ -0.76
VIPAS39-211ENST00000557658 HOXA5P20719 270 aa10.28□□□□□ -0.76
VIPAS39-211ENST00000557658 ITGA3P26006 1051 aa10.28□□□□□ -0.76
VIPAS39-211ENST00000557658 UCP3P55916 312 aa10.28□□□□□ -0.76
VIPAS39-211ENST00000557658 CNN3Q15417 329 aaKnown RBP10.28□□□□□ -0.76
VIPAS39-211ENST00000557658 SHBQ15464 509 aa10.28□□□□□ -0.76
VIPAS39-211ENST00000557658 NKAIN1Q4KMZ8 207 aa10.28□□□□□ -0.76
VIPAS39-211ENST00000557658 HIKESHIQ53FT3 197 aa10.28□□□□□ -0.76
VIPAS39-211ENST00000557658 PHYHD1Q5SRE7 291 aa10.28□□□□□ -0.76
VIPAS39-211ENST00000557658 FOXL2NBQ6ZUU3 175 aa10.28□□□□□ -0.76
VIPAS39-211ENST00000557658 OR8G5Q8NG78 346 aa10.28□□□□□ -0.76
VIPAS39-211ENST00000557658 OR4D5Q8NGN0 318 aa10.28□□□□□ -0.76
VIPAS39-211ENST00000557658 OR2G3Q8NGZ4 309 aa10.28□□□□□ -0.76
VIPAS39-211ENST00000557658 TMEM54Q969K7 222 aa10.28□□□□□ -0.76
VIPAS39-211ENST00000557658 NABP1Q96AH0 204 aa10.28□□□□□ -0.76
VIPAS39-211ENST00000557658 SGK3Q96BR1 496 aa10.28□□□□□ -0.76
VIPAS39-211ENST00000557658 MARS2Q96GW9 593 aaKnown RBP10.28□□□□□ -0.76
VIPAS39-211ENST00000557658 BOD1Q96IK1 185 aa10.28□□□□□ -0.76
VIPAS39-211ENST00000557658 RARRES2Q99969 163 aa10.28□□□□□ -0.76
VIPAS39-211ENST00000557658 WDR77Q9BQA1 342 aaPredicted RBP10.28□□□□□ -0.76
VIPAS39-211ENST00000557658 GGACTQ9BVM4 153 aa10.28□□□□□ -0.76
VIPAS39-211ENST00000557658 ZNF286AQ9HBT8 521 aa10.28□□□□□ -0.76
VIPAS39-211ENST00000557658 DMRT1Q9Y5R6 373 aa10.28□□□□□ -0.76
VIPAS39-211ENST00000557658 CCDC187A0A096LP49 1063 aa10.27□□□□□ -0.76
VIPAS39-211ENST00000557658 BTBD17A6NE02 478 aa10.27□□□□□ -0.76
VIPAS39-211ENST00000557658 YKT6O15498 198 aa10.27□□□□□ -0.76
VIPAS39-211ENST00000557658 NXPH1P58417 271 aa10.27□□□□□ -0.76
VIPAS39-211ENST00000557658 HERV-K104P61576 105 aa10.27□□□□□ -0.76
VIPAS39-211ENST00000557658 OR2C3Q8N628 320 aa10.27□□□□□ -0.76
VIPAS39-211ENST00000557658 OR14L1PQ8NHC6 308 aa10.27□□□□□ -0.76
VIPAS39-211ENST00000557658 MR1Q95460 341 aa10.27□□□□□ -0.76
VIPAS39-211ENST00000557658 MOB3AQ96BX8 217 aa10.27□□□□□ -0.76
VIPAS39-211ENST00000557658 MUCL1Q96DR8 90 aa10.27□□□□□ -0.76
VIPAS39-211ENST00000557658 RBM24Q9BX46 236 aaKnown RBP10.27□□□□□ -0.76
VIPAS39-211ENST00000557658 BCL2L14Q9BZR8 327 aa10.27□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms