RNA–Protein interactions for RNA: ENST00000557470.5

VPS33B-207, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 5

Gene VPS33B, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-207ENST00000557470 SNTNA6NMZ2 147 aa4.74□□□□□ -1.65
VPS33B-207ENST00000557470 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP4.74□□□□□ -1.65
VPS33B-207ENST00000557470 M0R135 149 aa4.74□□□□□ -1.65
VPS33B-207ENST00000557470 ACOT8O14734 319 aa4.74□□□□□ -1.65
VPS33B-207ENST00000557470 IFNA14P01570 189 aa4.74□□□□□ -1.65
VPS33B-207ENST00000557470 IL1AP01583 271 aa4.74□□□□□ -1.65
VPS33B-207ENST00000557470 S100A9P06702 114 aaKnown RBP4.74□□□□□ -1.65
VPS33B-207ENST00000557470 MUC1P15941 1255 aaPredicted RBP4.74□□□□□ -1.65
VPS33B-207ENST00000557470 ZNF3P17036 446 aa4.74□□□□□ -1.65
VPS33B-207ENST00000557470 PAX6P26367 422 aa4.74□□□□□ -1.65
VPS33B-207ENST00000557470 PPIFP30405 207 aaKnown RBP4.74□□□□□ -1.65
VPS33B-207ENST00000557470 IFNA8P32881 189 aa4.74□□□□□ -1.65
VPS33B-207ENST00000557470 GGT2P36268 569 aa4.74□□□□□ -1.65
VPS33B-207ENST00000557470 TAGLN2P37802 199 aaKnown RBP4.74□□□□□ -1.65
VPS33B-207ENST00000557470 CBX5P45973 191 aa4.74□□□□□ -1.65
VPS33B-207ENST00000557470 FXYD6P3P58550 94 aa4.74□□□□□ -1.65
VPS33B-207ENST00000557470 SSTP61278 116 aa4.74□□□□□ -1.65
VPS33B-207ENST00000557470 CSNK2BP67870 215 aa4.74□□□□□ -1.65
VPS33B-207ENST00000557470 SPIBQ01892 262 aa4.74□□□□□ -1.65
VPS33B-207ENST00000557470 EMX1Q04741 257 aaPredicted RBP4.74□□□□□ -1.65
VPS33B-207ENST00000557470 ACSM1Q08AH1 577 aa4.74□□□□□ -1.65
VPS33B-207ENST00000557470 ECH1Q13011 328 aa4.74□□□□□ -1.65
VPS33B-207ENST00000557470 TRAM2Q15035 370 aa4.74□□□□□ -1.65
VPS33B-207ENST00000557470 MICBQ29980 383 aa4.74□□□□□ -1.65
VPS33B-207ENST00000557470 LRRC75BQ2VPJ9 315 aa4.74□□□□□ -1.65
VPS33B-207ENST00000557470 SNAI3Q3KNW1 292 aa4.74□□□□□ -1.65
VPS33B-207ENST00000557470 SERTAD4-AS1Q5TG53 156 aa4.74□□□□□ -1.65
VPS33B-207ENST00000557470 NCR3LG1Q68D85 454 aa4.74□□□□□ -1.65
VPS33B-207ENST00000557470 HCP5Q6MZN7 132 aa4.74□□□□□ -1.65
VPS33B-207ENST00000557470 TMPRSS11FQ6ZWK6 438 aa4.74□□□□□ -1.65
VPS33B-207ENST00000557470 MBOAT2Q6ZWT7 520 aa4.74□□□□□ -1.65
VPS33B-207ENST00000557470 TSEN54Q7Z6J9 526 aaKnown RBP4.74□□□□□ -1.65
VPS33B-207ENST00000557470 VTCN1Q7Z7D3 282 aa4.74□□□□□ -1.65
VPS33B-207ENST00000557470 WDR86Q86TI4 376 aa4.74□□□□□ -1.65
VPS33B-207ENST00000557470 NDUFA11Q86Y39 141 aa4.74□□□□□ -1.65
VPS33B-207ENST00000557470 SERPINA12Q8IW75 414 aa4.74□□□□□ -1.65
VPS33B-207ENST00000557470 C11orf53Q8IXP5 236 aa4.74□□□□□ -1.65
VPS33B-207ENST00000557470 ZNF679Q8IYX0 411 aa4.74□□□□□ -1.65
VPS33B-207ENST00000557470 RNF113BQ8IZP6 322 aaKnown RBP4.74□□□□□ -1.65
VPS33B-207ENST00000557470 LNX2Q8N448 690 aa4.74□□□□□ -1.65
VPS33B-207ENST00000557470 SLC26A10Q8NG04 563 aa4.74□□□□□ -1.65
VPS33B-207ENST00000557470 OR4F17Q8NGA8 305 aa4.74□□□□□ -1.65
VPS33B-207ENST00000557470 OR51G2Q8NGK0 314 aa4.74□□□□□ -1.65
VPS33B-207ENST00000557470 C8orf46Q8TAG6 207 aa4.74□□□□□ -1.65
VPS33B-207ENST00000557470 SLC7A13Q8TCU3 470 aa4.74□□□□□ -1.65
VPS33B-207ENST00000557470 LRRC29Q8WV35 223 aa4.74□□□□□ -1.65
VPS33B-207ENST00000557470 H1FXQ92522 213 aaKnown RBP4.74□□□□□ -1.65
VPS33B-207ENST00000557470 SLC7A6OSQ96CW6 309 aaPredicted RBP4.74□□□□□ -1.65
VPS33B-207ENST00000557470 BSCL2Q96G97 398 aaPredicted RBP4.74□□□□□ -1.65
VPS33B-207ENST00000557470 ZNF799Q96GE5 643 aa4.74□□□□□ -1.65
VPS33B-207ENST00000557470 WWC2-AS2Q96NR7 200 aa4.74□□□□□ -1.65
VPS33B-207ENST00000557470 OR4F4Q96R69 305 aa4.74□□□□□ -1.65
VPS33B-207ENST00000557470 GPX7Q96SL4 187 aaPredicted RBP4.74□□□□□ -1.65
VPS33B-207ENST00000557470 DCTN5Q9BTE1 182 aa4.74□□□□□ -1.65
VPS33B-207ENST00000557470 NPFFR1Q9GZQ6 430 aa4.74□□□□□ -1.65
VPS33B-207ENST00000557470 ZNF702PQ9H963 129 aa4.74□□□□□ -1.65
VPS33B-207ENST00000557470 RNPEPL1Q9HAU8 725 aa4.74□□□□□ -1.65
VPS33B-207ENST00000557470 RAB18Q9NP72 206 aa4.74□□□□□ -1.65
VPS33B-207ENST00000557470 RPRD1BQ9NQG5 326 aaKnown RBP4.74□□□□□ -1.65
VPS33B-207ENST00000557470 FAM212BQ9NTI7 297 aaPredicted RBP4.74□□□□□ -1.65
VPS33B-207ENST00000557470 SERTAD4Q9NUC0 356 aa4.74□□□□□ -1.65
VPS33B-207ENST00000557470 PRPF19Q9UMS4 504 aaKnown RBP4.74□□□□□ -1.65
VPS33B-207ENST00000557470 SIGLEC7Q9Y286 467 aa4.74□□□□□ -1.65
VPS33B-207ENST00000557470 IER3IP1Q9Y5U9 82 aa4.74□□□□□ -1.65
VPS33B-207ENST00000557470 STAB2Q8WWQ8 2551 aa4.74□□□□□ -1.65
VPS33B-207ENST00000557470 SMIM31A0A1B0GVY4 71 aa4.73□□□□□ -1.65
VPS33B-207ENST00000557470 FAM230AA0A1W2PPH8 454 aa4.73□□□□□ -1.65
VPS33B-207ENST00000557470 WI2-2373I1.2A0A1W2PRP0 233 aa4.73□□□□□ -1.65
VPS33B-207ENST00000557470 C5orf52A6NGY3 159 aa4.73□□□□□ -1.65
VPS33B-207ENST00000557470 H0Y8G0 127 aa4.73□□□□□ -1.65
VPS33B-207ENST00000557470 M0R1W7 72 aa4.73□□□□□ -1.65
VPS33B-207ENST00000557470 BHLHE40O14503 412 aa4.73□□□□□ -1.65
VPS33B-207ENST00000557470 NDUFB3O43676 98 aa4.73□□□□□ -1.65
VPS33B-207ENST00000557470 NDUFB2O95178 105 aa4.73□□□□□ -1.65
VPS33B-207ENST00000557470 TXNDC12O95881 172 aa4.73□□□□□ -1.65
VPS33B-207ENST00000557470 TFF1P04155 84 aa4.73□□□□□ -1.65
VPS33B-207ENST00000557470 IFNW1P05000 195 aa4.73□□□□□ -1.65
VPS33B-207ENST00000557470 CFL1P23528 166 aaKnown RBP4.73□□□□□ -1.65
VPS33B-207ENST00000557470 CRABP1P29762 137 aa4.73□□□□□ -1.65
VPS33B-207ENST00000557470 KDELR2P33947 212 aa4.73□□□□□ -1.65
VPS33B-207ENST00000557470 TGM4P49221 684 aa4.73□□□□□ -1.65
VPS33B-207ENST00000557470 TPTEP56180 551 aa4.73□□□□□ -1.65
VPS33B-207ENST00000557470 LINC00310P59036 64 aa4.73□□□□□ -1.65
VPS33B-207ENST00000557470 KRTAP10-11P60412 298 aa4.73□□□□□ -1.65
VPS33B-207ENST00000557470 SELENOWP63302 87 aa4.73□□□□□ -1.65
VPS33B-207ENST00000557470 RFX4Q33E94 735 aa4.73□□□□□ -1.65
VPS33B-207ENST00000557470 LRRC10Q5BKY1 277 aa4.73□□□□□ -1.65
VPS33B-207ENST00000557470 DEFB121Q5J5C9 76 aa4.73□□□□□ -1.65
VPS33B-207ENST00000557470 GLYATL3Q5SZD4 288 aa4.73□□□□□ -1.65
VPS33B-207ENST00000557470 STUMQ69YW2 141 aa4.73□□□□□ -1.65
VPS33B-207ENST00000557470 FAM122CQ6P4D5 195 aa4.73□□□□□ -1.65
VPS33B-207ENST00000557470 ERICH5Q6P6B1 374 aa4.73□□□□□ -1.65
VPS33B-207ENST00000557470 TMEM88Q6PEY1 159 aa4.73□□□□□ -1.65
VPS33B-207ENST00000557470 DNM1P34Q6PK57 102 aa4.73□□□□□ -1.65
VPS33B-207ENST00000557470 WDR82Q6UXN9 313 aa4.73□□□□□ -1.65
VPS33B-207ENST00000557470 DPY19L2P2Q6ZN68 376 aa4.73□□□□□ -1.65
VPS33B-207ENST00000557470 SLC36A1Q7Z2H8 476 aa4.73□□□□□ -1.65
VPS33B-207ENST00000557470 ZNF573Q86YE8 665 aa4.73□□□□□ -1.65
VPS33B-207ENST00000557470 OR6V1Q8N148 313 aa4.73□□□□□ -1.65
VPS33B-207ENST00000557470 Q8N2B8 174 aa4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms