RNA–Protein interactions for RNA: ENST00000557285.1

VSX1-207, Transcript of visual system homeobox 1, humanhuman

TSL 3

Gene VSX1, Length 558 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-207ENST00000557285 RAG2P55895 527 aa13.54□□□□□ -0.24
VSX1-207ENST00000557285 EDDM3BP56851 147 aa13.54□□□□□ -0.24
VSX1-207ENST00000557285 ERVFRD-1P60508 538 aa13.54□□□□□ -0.24
VSX1-207ENST00000557285 ERVK11-1P61568 191 aa13.54□□□□□ -0.24
VSX1-207ENST00000557285 ALKBH1Q13686 389 aaKnown RBP13.54□□□□□ -0.24
VSX1-207ENST00000557285 EDDM3AQ14507 147 aa13.54□□□□□ -0.24
VSX1-207ENST00000557285 LPCAT4Q643R3 524 aa13.54□□□□□ -0.24
VSX1-207ENST00000557285 TMEM200BQ69YZ2 307 aa13.54□□□□□ -0.24
VSX1-207ENST00000557285 FDX2Q6P4F2 183 aa13.54□□□□□ -0.24
VSX1-207ENST00000557285 TMEM86BQ8N661 226 aa13.54□□□□□ -0.24
VSX1-207ENST00000557285 OR52I1Q8NGK6 324 aa13.54□□□□□ -0.24
VSX1-207ENST00000557285 OR13C9Q8NGT0 318 aa13.54□□□□□ -0.24
VSX1-207ENST00000557285 APH1BQ8WW43 257 aa13.54□□□□□ -0.24
VSX1-207ENST00000557285 CYGBQ8WWM9 190 aa13.54□□□□□ -0.24
VSX1-207ENST00000557285 TNFRSF14Q92956 283 aa13.54□□□□□ -0.24
VSX1-207ENST00000557285 C10orf35Q96D05 121 aa13.54□□□□□ -0.24
VSX1-207ENST00000557285 DMRTB1Q96MA1 342 aa13.54□□□□□ -0.24
VSX1-207ENST00000557285 ZNF747Q9BV97 191 aa13.54□□□□□ -0.24
VSX1-207ENST00000557285 NEK6Q9HC98 313 aa13.54□□□□□ -0.24
VSX1-207ENST00000557285 RBFOX1Q9NWB1 397 aaKnown RBP13.54□□□□□ -0.24
VSX1-207ENST00000557285 ERVK13-1Q9NX77 482 aa13.54□□□□□ -0.24
VSX1-207ENST00000557285 HHLA2Q9UM44 414 aa13.54□□□□□ -0.24
VSX1-207ENST00000557285 CAB39Q9Y376 341 aaPredicted RBP13.54□□□□□ -0.24
VSX1-207ENST00000557285 RPL36Q9Y3U8 105 aaKnown RBP13.54□□□□□ -0.24
VSX1-207ENST00000557285 POMT1Q9Y6A1 747 aa13.54□□□□□ -0.24
VSX1-207ENST00000557285 NBEAL1Q6ZS30 2694 aa13.54□□□□□ -0.24
VSX1-207ENST00000557285 BTBD17A6NE02 478 aa13.53□□□□□ -0.24
VSX1-207ENST00000557285 OR4C45A6NMZ5 311 aa13.53□□□□□ -0.24
VSX1-207ENST00000557285 E9PI62 339 aa13.53□□□□□ -0.24
VSX1-207ENST00000557285 GPR137BO60478 399 aa13.53□□□□□ -0.24
VSX1-207ENST00000557285 CYB5AP00167 134 aa13.53□□□□□ -0.24
VSX1-207ENST00000557285 ISG15P05161 165 aa13.53□□□□□ -0.24
VSX1-207ENST00000557285 BCL3P20749 454 aa13.53□□□□□ -0.24
VSX1-207ENST00000557285 NPBWR2P48146 333 aa13.53□□□□□ -0.24
VSX1-207ENST00000557285 UBE2E1P51965 193 aa13.53□□□□□ -0.24
VSX1-207ENST00000557285 ZNF273Q14593 569 aa13.53□□□□□ -0.24
VSX1-207ENST00000557285 ZNF782Q6ZMW2 699 aaPredicted RBP13.53□□□□□ -0.24
VSX1-207ENST00000557285 C1orf122Q6ZSJ8 110 aa13.53□□□□□ -0.24
VSX1-207ENST00000557285 LDLRAD3Q86YD5 345 aa13.53□□□□□ -0.24
VSX1-207ENST00000557285 OR5D18Q8NGL1 313 aa13.53□□□□□ -0.24
VSX1-207ENST00000557285 OR5D13Q8NGL4 314 aa13.53□□□□□ -0.24
VSX1-207ENST00000557285 CNIH3Q8TBE1 160 aa13.53□□□□□ -0.24
VSX1-207ENST00000557285 C17orf50Q8WW18 174 aa13.53□□□□□ -0.24
VSX1-207ENST00000557285 C1RLQ9NZP8 487 aa13.53□□□□□ -0.24
VSX1-207ENST00000557285 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.53□□□□□ -0.24
VSX1-207ENST00000557285 A0A1W2PPH5 198 aa13.52□□□□□ -0.25
VSX1-207ENST00000557285 ANKRD65E5RJM6 399 aa13.52□□□□□ -0.25
VSX1-207ENST00000557285 IGHA1P01876 353 aa13.52□□□□□ -0.25
VSX1-207ENST00000557285 PRKACAP17612 351 aa13.52□□□□□ -0.25
VSX1-207ENST00000557285 PRKACBP22694 351 aa13.52□□□□□ -0.25
VSX1-207ENST00000557285 GABRR1P24046 479 aa13.52□□□□□ -0.25
VSX1-207ENST00000557285 PAX6P26367 422 aa13.52□□□□□ -0.25
VSX1-207ENST00000557285 CCR9P51686 369 aa13.52□□□□□ -0.25
VSX1-207ENST00000557285 GBX2P52951 348 aaPredicted RBP13.52□□□□□ -0.25
VSX1-207ENST00000557285 RELBQ01201 579 aa13.52□□□□□ -0.25
VSX1-207ENST00000557285 RAB40BQ12829 278 aa13.52□□□□□ -0.25
VSX1-207ENST00000557285 RCN1Q15293 331 aa13.52□□□□□ -0.25
VSX1-207ENST00000557285 HCP5Q6MZN7 132 aa13.52□□□□□ -0.25
VSX1-207ENST00000557285 SHISA2Q6UWI4 295 aa13.52□□□□□ -0.25
VSX1-207ENST00000557285 LHFPL2Q6ZUX7 228 aa13.52□□□□□ -0.25
VSX1-207ENST00000557285 GDPD3Q7L5L3 318 aa13.52□□□□□ -0.25
VSX1-207ENST00000557285 RNF144BQ7Z419 303 aa13.52□□□□□ -0.25
VSX1-207ENST00000557285 TSEN15Q8WW01 171 aaKnown RBP13.52□□□□□ -0.25
VSX1-207ENST00000557285 OPALINQ96PE5 141 aa13.52□□□□□ -0.25
VSX1-207ENST00000557285 MYCBPQ99417 103 aaPredicted RBP13.52□□□□□ -0.25
VSX1-207ENST00000557285 PDCD1LG2Q9BQ51 273 aa13.52□□□□□ -0.25
VSX1-207ENST00000557285 CHST6Q9GZX3 395 aa13.52□□□□□ -0.25
VSX1-207ENST00000557285 DPAGT1Q9H3H5 408 aa13.52□□□□□ -0.25
VSX1-207ENST00000557285 ZNRD1Q9P1U0 126 aa13.52□□□□□ -0.25
VSX1-207ENST00000557285 SF3B6Q9Y3B4 125 aaKnown RBP13.52□□□□□ -0.25
VSX1-207ENST00000557285 K7N7A8 449 aa13.51□□□□□ -0.25
VSX1-207ENST00000557285 WBP4O75554 376 aaKnown RBP13.51□□□□□ -0.25
VSX1-207ENST00000557285 HAND1O96004 215 aa13.51□□□□□ -0.25
VSX1-207ENST00000557285 CHRM2P08172 466 aa13.51□□□□□ -0.25
VSX1-207ENST00000557285 HCKP08631 526 aa13.51□□□□□ -0.25
VSX1-207ENST00000557285 PEX2P28328 305 aa13.51□□□□□ -0.25
VSX1-207ENST00000557285 BMXP51813 675 aa13.51□□□□□ -0.25
VSX1-207ENST00000557285 GTF2A1P52655 376 aaPredicted RBP13.51□□□□□ -0.25
VSX1-207ENST00000557285 SRSF4Q08170 494 aaKnown RBP13.51□□□□□ -0.25
VSX1-207ENST00000557285 TAF9Q16594 264 aa13.51□□□□□ -0.25
VSX1-207ENST00000557285 UTS2BQ765I0 119 aa13.51□□□□□ -0.25
VSX1-207ENST00000557285 FAM58AQ8N1B3 248 aa13.51□□□□□ -0.25
VSX1-207ENST00000557285 SYS1Q8N2H4 156 aa13.51□□□□□ -0.25
VSX1-207ENST00000557285 DNAAF1Q8NEP3 725 aa13.51□□□□□ -0.25
VSX1-207ENST00000557285 OR4F5Q8NH21 305 aa13.51□□□□□ -0.25
VSX1-207ENST00000557285 OR5AK2Q8NH90 309 aa13.51□□□□□ -0.25
VSX1-207ENST00000557285 SGMS2Q8NHU3 365 aa13.51□□□□□ -0.25
VSX1-207ENST00000557285 DYRK2Q92630 601 aa13.51□□□□□ -0.25
VSX1-207ENST00000557285 COMMD4Q9H0A8 199 aa13.51□□□□□ -0.25
VSX1-207ENST00000557285 FAM234AQ9H0X4 552 aa13.51□□□□□ -0.25
VSX1-207ENST00000557285 BEX1Q9HBH7 125 aa13.51□□□□□ -0.25
VSX1-207ENST00000557285 INPP5EQ9NRR6 644 aa13.51□□□□□ -0.25
VSX1-207ENST00000557285 TRBV2A0A0J9YWF9 115 aa13.5□□□□□ -0.25
VSX1-207ENST00000557285 hCG_1809904A0A1W2PP81 198 aa13.5□□□□□ -0.25
VSX1-207ENST00000557285 A0A1W2PPE2 198 aa13.5□□□□□ -0.25
VSX1-207ENST00000557285 A0A1W2PR64 198 aa13.5□□□□□ -0.25
VSX1-207ENST00000557285 A0A1W2PRV1 198 aa13.5□□□□□ -0.25
VSX1-207ENST00000557285 TMEM82A0PJX8 343 aa13.5□□□□□ -0.25
VSX1-207ENST00000557285 ZFPL1O95159 310 aa13.5□□□□□ -0.25
VSX1-207ENST00000557285 ACSM1Q08AH1 577 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms