RNA–Protein interactions for RNA: ENST00000556210.1

CUX1-215, Transcript of cut like homeobox 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CUX1, Length 4,044 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-215ENST00000556210 DNASE2BQ8WZ79 361 aa13.02□□□□□ -0.33
CUX1-215ENST00000556210 CNTNAP3Q9BZ76 1288 aa13.02□□□□□ -0.33
CUX1-215ENST00000556210 OBP2BQ9NPH6 170 aa13.02□□□□□ -0.33
CUX1-215ENST00000556210 CFAP54Q96N23 3096 aa13.01□□□□□ -0.33
CUX1-215ENST00000556210 A0A0G2JMM0 328 aa13.01□□□□□ -0.33
CUX1-215ENST00000556210 A0A1W2PPB8 328 aa13.01□□□□□ -0.33
CUX1-215ENST00000556210 A0A1W2PRS3 328 aa13.01□□□□□ -0.33
CUX1-215ENST00000556210 KIR3DP1A8MWS1 328 aa13.01□□□□□ -0.33
CUX1-215ENST00000556210 NPIPB7O75200 414 aa13.01□□□□□ -0.33
CUX1-215ENST00000556210 ONECUT2O95948 504 aa13.01□□□□□ -0.33
CUX1-215ENST00000556210 IFNA17P01571 189 aa13.01□□□□□ -0.33
CUX1-215ENST00000556210 RCC1P18754 421 aaPredicted RBP13.01□□□□□ -0.33
CUX1-215ENST00000556210 UBE2V2Q15819 145 aa13.01□□□□□ -0.33
CUX1-215ENST00000556210 BMPERQ8N8U9 685 aa13.01□□□□□ -0.33
CUX1-215ENST00000556210 DTWD2Q8NBA8 298 aa13.01□□□□□ -0.33
CUX1-215ENST00000556210 OR2V1Q8NHB1 315 aa13.01□□□□□ -0.33
CUX1-215ENST00000556210 MITD1Q8WV92 249 aa13.01□□□□□ -0.33
CUX1-215ENST00000556210 RRNAD1Q96FB5 475 aaKnown RBP13.01□□□□□ -0.33
CUX1-215ENST00000556210 DMRTA2Q96SC8 542 aa13.01□□□□□ -0.33
CUX1-215ENST00000556210 BCO1Q9HAY6 547 aa13.01□□□□□ -0.33
CUX1-215ENST00000556210 TRANK1O15050 2925 aa13.01□□□□□ -0.33
CUX1-215ENST00000556210 WDR1O75083 606 aa13.01□□□□□ -0.33
CUX1-215ENST00000556210 SLC34A2O95436 690 aa13.01□□□□□ -0.33
CUX1-215ENST00000556210 IGLV3-19P01714 112 aa13.01□□□□□ -0.33
CUX1-215ENST00000556210 DAOP14920 347 aa13.01□□□□□ -0.33
CUX1-215ENST00000556210 ZNF674Q2M3X9 581 aa13.01□□□□□ -0.33
CUX1-215ENST00000556210 ACTBL2Q562R1 376 aa13.01□□□□□ -0.33
CUX1-215ENST00000556210 APH1AQ96BI3 265 aa13.01□□□□□ -0.33
CUX1-215ENST00000556210 PECRQ9BY49 303 aa13.01□□□□□ -0.33
CUX1-215ENST00000556210 NECAP2Q9NVZ3 263 aa13.01□□□□□ -0.33
CUX1-215ENST00000556210 C3orf80F5H4A9 247 aa13.01□□□□□ -0.33
CUX1-215ENST00000556210 PTAFRP25105 342 aa13.01□□□□□ -0.33
CUX1-215ENST00000556210 RAC1P63000 192 aa13.01□□□□□ -0.33
CUX1-215ENST00000556210 FABP9Q0Z7S8 132 aa13.01□□□□□ -0.33
CUX1-215ENST00000556210 IL11RAQ14626 422 aa13.01□□□□□ -0.33
CUX1-215ENST00000556210 BIVMQ86UB2 503 aa13.01□□□□□ -0.33
CUX1-215ENST00000556210 OR10S1Q8NGN2 331 aa13.01□□□□□ -0.33
CUX1-215ENST00000556210 HINT2Q9BX68 163 aa13.01□□□□□ -0.33
CUX1-215ENST00000556210 CDH20Q9HBT6 801 aa13.01□□□□□ -0.33
CUX1-215ENST00000556210 OR5AC2Q9NZP5 309 aa13.01□□□□□ -0.33
CUX1-215ENST00000556210 TCFL5Q9UL49 500 aa13.01□□□□□ -0.33
CUX1-215ENST00000556210 NUDT19A8MXV4 375 aa13□□□□□ -0.33
CUX1-215ENST00000556210 OR5AC1P0C628 307 aa13□□□□□ -0.33
CUX1-215ENST00000556210 SLC25A4P12235 298 aa13□□□□□ -0.33
CUX1-215ENST00000556210 CALCRP30988 508 aa13□□□□□ -0.33
CUX1-215ENST00000556210 USF2Q15853 346 aaPredicted RBP13□□□□□ -0.33
CUX1-215ENST00000556210 PLAC9Q5JTB6 97 aa13□□□□□ -0.33
CUX1-215ENST00000556210 LY6G6FQ5SQ64 297 aa13□□□□□ -0.33
CUX1-215ENST00000556210 CMTM1Q8IZ96 169 aa13□□□□□ -0.33
CUX1-215ENST00000556210 ZNF488Q96MN9 340 aa13□□□□□ -0.33
CUX1-215ENST00000556210 URGCP-MRPS24S4R325 110 aa13□□□□□ -0.33
CUX1-215ENST00000556210 ABCA1O95477 2261 aa13□□□□□ -0.33
CUX1-215ENST00000556210 LIFP15018 202 aa13□□□□□ -0.33
CUX1-215ENST00000556210 RAB1AP62820 205 aa13□□□□□ -0.33
CUX1-215ENST00000556210 IL34Q6ZMJ4 242 aa13□□□□□ -0.33
CUX1-215ENST00000556210 OSR2Q8N2R0 312 aa13□□□□□ -0.33
CUX1-215ENST00000556210 EIF4E3Q8N5X7 224 aaKnown RBP13□□□□□ -0.33
CUX1-215ENST00000556210 KIRREL1Q96J84 757 aa13□□□□□ -0.33
CUX1-215ENST00000556210 RSRP1Q9BUV0 290 aa13□□□□□ -0.33
CUX1-215ENST00000556210 PCED1AQ9H1Q7 454 aa13□□□□□ -0.33
CUX1-215ENST00000556210 B3GAT1Q9P2W7 334 aa13□□□□□ -0.33
CUX1-215ENST00000556210 ZMAT5Q9UDW3 170 aaKnown RBP13□□□□□ -0.33
CUX1-215ENST00000556210 TRAPPC2LQ9UL33 140 aa13□□□□□ -0.33
CUX1-215ENST00000556210 RNF150Q9ULK6 438 aa13□□□□□ -0.33
CUX1-215ENST00000556210 KPTNQ9Y664 436 aa13□□□□□ -0.33
CUX1-215ENST00000556210 ZNF732B4DXR9 585 aa13□□□□□ -0.33
CUX1-215ENST00000556210 SIRPB1O00241 398 aa13□□□□□ -0.33
CUX1-215ENST00000556210 TNFSF15O95150 251 aa13□□□□□ -0.33
CUX1-215ENST00000556210 HPNP05981 417 aa13□□□□□ -0.33
CUX1-215ENST00000556210 ID4P47928 161 aa13□□□□□ -0.33
CUX1-215ENST00000556210 PHYHD1Q5SRE7 291 aa13□□□□□ -0.33
CUX1-215ENST00000556210 DRAM2Q6UX65 266 aa13□□□□□ -0.33
CUX1-215ENST00000556210 TMEM182Q6ZP80 229 aaPredicted RBP13□□□□□ -0.33
CUX1-215ENST00000556210 TUSC5Q8IXB3 177 aa13□□□□□ -0.33
CUX1-215ENST00000556210 EMG1Q92979 244 aaKnown RBP13□□□□□ -0.33
CUX1-215ENST00000556210 DUSP13Q9UII6 198 aa13□□□□□ -0.33
CUX1-215ENST00000556210 PIEZO2Q9H5I5 2752 aa12.99□□□□□ -0.33
CUX1-215ENST00000556210 S100A8P05109 93 aa12.99□□□□□ -0.33
CUX1-215ENST00000556210 TUBG1P23258 451 aa12.99□□□□□ -0.33
CUX1-215ENST00000556210 OR2T2Q6IF00 324 aa12.99□□□□□ -0.33
CUX1-215ENST00000556210 ARRDC1Q8N5I2 433 aa12.99□□□□□ -0.33
CUX1-215ENST00000556210 OR11L1Q8NGX0 322 aa12.99□□□□□ -0.33
CUX1-215ENST00000556210 C2orf50Q96LR7 162 aa12.99□□□□□ -0.33
CUX1-215ENST00000556210 TWSG1Q9GZX9 223 aa12.99□□□□□ -0.33
CUX1-215ENST00000556210 RAB33BQ9H082 229 aa12.99□□□□□ -0.33
CUX1-215ENST00000556210 FZR1Q9UM11 496 aa12.99□□□□□ -0.33
CUX1-215ENST00000556210 PMS2P1A4D2B8 440 aa12.99□□□□□ -0.33
CUX1-215ENST00000556210 ACTL6AO96019 429 aa12.99□□□□□ -0.33
CUX1-215ENST00000556210 MAGEA5P43359 124 aa12.99□□□□□ -0.33
CUX1-215ENST00000556210 SUMF2Q8NBJ7 301 aa12.99□□□□□ -0.33
CUX1-215ENST00000556210 PP6455Q8WZ26 134 aa12.99□□□□□ -0.33
CUX1-215ENST00000556210 MRPL24Q96A35 216 aaKnown RBP12.99□□□□□ -0.33
CUX1-215ENST00000556210 SGK3Q96BR1 496 aa12.99□□□□□ -0.33
CUX1-215ENST00000556210 SSSCA1O60232 199 aa12.99□□□□□ -0.33
CUX1-215ENST00000556210 ZBTB25P24278 435 aa12.99□□□□□ -0.33
CUX1-215ENST00000556210 SOHLH1Q5JUK2 328 aa12.99□□□□□ -0.33
CUX1-215ENST00000556210 C1orf210Q8IVY1 113 aa12.99□□□□□ -0.33
CUX1-215ENST00000556210 CCDC71LQ8N9Z2 235 aa12.99□□□□□ -0.33
CUX1-215ENST00000556210 CT55Q8WUE5 264 aa12.99□□□□□ -0.33
CUX1-215ENST00000556210 SRXN1Q9BYN0 137 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms