RNA–Protein interactions for RNA: ENST00000556066.1

PSEN1-216, Transcript of presenilin 1, humanhuman

TSL 3

Gene PSEN1, Length 612 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-216ENST00000556066 POMT1Q9Y6A1 747 aa5.51□□□□□ -1.53
PSEN1-216ENST00000556066 A0A1W2PQ09 198 aa5.5□□□□□ -1.53
PSEN1-216ENST00000556066 CLPSL1A2RUU4 121 aa5.5□□□□□ -1.53
PSEN1-216ENST00000556066 BTBD17A6NE02 478 aa5.5□□□□□ -1.53
PSEN1-216ENST00000556066 TMEM210A6NLX4 147 aa5.5□□□□□ -1.53
PSEN1-216ENST00000556066 PTGES3LE9PB15 166 aa5.5□□□□□ -1.53
PSEN1-216ENST00000556066 SLC1A7O00341 560 aa5.5□□□□□ -1.53
PSEN1-216ENST00000556066 XPNPEP2O43895 674 aa5.5□□□□□ -1.53
PSEN1-216ENST00000556066 TSC22D2O75157 780 aa5.5□□□□□ -1.53
PSEN1-216ENST00000556066 NDUFA7O95182 113 aa5.5□□□□□ -1.53
PSEN1-216ENST00000556066 PAHP00439 452 aa5.5□□□□□ -1.53
PSEN1-216ENST00000556066 AMY2BP19961 511 aa5.5□□□□□ -1.53
PSEN1-216ENST00000556066 GLRA1P23415 457 aa5.5□□□□□ -1.53
PSEN1-216ENST00000556066 EEF1B2P24534 225 aaKnown RBP5.5□□□□□ -1.53
PSEN1-216ENST00000556066 GABRA2P47869 451 aa5.5□□□□□ -1.53
PSEN1-216ENST00000556066 GABARAPL2P60520 117 aa5.5□□□□□ -1.53
PSEN1-216ENST00000556066 ESRRGP62508 458 aa5.5□□□□□ -1.53
PSEN1-216ENST00000556066 CDK5Q00535 292 aa5.5□□□□□ -1.53
PSEN1-216ENST00000556066 DEFA6Q01524 100 aa5.5□□□□□ -1.53
PSEN1-216ENST00000556066 KLRD1Q13241 179 aa5.5□□□□□ -1.53
PSEN1-216ENST00000556066 SNAPC1Q16533 368 aa5.5□□□□□ -1.53
PSEN1-216ENST00000556066 SMN1Q16637 294 aaKnown RBP5.5□□□□□ -1.53
PSEN1-216ENST00000556066 CEP78Q5JTW2 689 aa5.5□□□□□ -1.53
PSEN1-216ENST00000556066 GPR107Q5VW38 600 aa5.5□□□□□ -1.53
PSEN1-216ENST00000556066 STUMQ69YW2 141 aa5.5□□□□□ -1.53
PSEN1-216ENST00000556066 XAF1Q6GPH4 301 aa5.5□□□□□ -1.53
PSEN1-216ENST00000556066 ZDHHC23Q8IYP9 409 aa5.5□□□□□ -1.53
PSEN1-216ENST00000556066 SPARTQ8N0X7 666 aa5.5□□□□□ -1.53
PSEN1-216ENST00000556066 TMEM86BQ8N661 226 aa5.5□□□□□ -1.53
PSEN1-216ENST00000556066 BVESQ8NE79 360 aa5.5□□□□□ -1.53
PSEN1-216ENST00000556066 BPIFB6Q8NFQ5 453 aa5.5□□□□□ -1.53
PSEN1-216ENST00000556066 DYRK2Q92630 601 aa5.5□□□□□ -1.53
PSEN1-216ENST00000556066 C12orf43Q96C57 262 aaKnown RBP5.5□□□□□ -1.53
PSEN1-216ENST00000556066 MED30Q96HR3 178 aa5.5□□□□□ -1.53
PSEN1-216ENST00000556066 LYZL4Q96KX0 146 aa5.5□□□□□ -1.53
PSEN1-216ENST00000556066 TLNRD1Q9H1K6 362 aa5.5□□□□□ -1.53
PSEN1-216ENST00000556066 DPAGT1Q9H3H5 408 aa5.5□□□□□ -1.53
PSEN1-216ENST00000556066 NIPAL2Q9H841 368 aa5.5□□□□□ -1.53
PSEN1-216ENST00000556066 ELL3Q9HB65 397 aaPredicted RBP5.5□□□□□ -1.53
PSEN1-216ENST00000556066 PAK1IP1Q9NWT1 392 aaPredicted RBP5.5□□□□□ -1.53
PSEN1-216ENST00000556066 TVP23BQ9NYZ1 205 aa5.5□□□□□ -1.53
PSEN1-216ENST00000556066 PTTG2Q9NZH5 202 aa5.5□□□□□ -1.53
PSEN1-216ENST00000556066 SLC25A10Q9UBX3 287 aaPredicted RBP5.5□□□□□ -1.53
PSEN1-216ENST00000556066 RSL24D1Q9UHA3 163 aaKnown RBP5.5□□□□□ -1.53
PSEN1-216ENST00000556066 CAB39Q9Y376 341 aaPredicted RBP5.5□□□□□ -1.53
PSEN1-216ENST00000556066 TET2Q6N021 2002 aaPredicted RBP5.49□□□□□ -1.53
PSEN1-216ENST00000556066 ZNF816-ZNF321PA0A0X1KG74 233 aa5.49□□□□□ -1.53
PSEN1-216ENST00000556066 TMEM269A0A1B0GVZ9 245 aa5.49□□□□□ -1.53
PSEN1-216ENST00000556066 MEIOCA2RUB1 952 aa5.49□□□□□ -1.53
PSEN1-216ENST00000556066 OR2AT4A6NND4 320 aa5.49□□□□□ -1.53
PSEN1-216ENST00000556066 ZNF732B4DXR9 585 aa5.49□□□□□ -1.53
PSEN1-216ENST00000556066 RNASEK-C17orf49H0YIS7 233 aa5.49□□□□□ -1.53
PSEN1-216ENST00000556066 NPFFO15130 113 aa5.49□□□□□ -1.53
PSEN1-216ENST00000556066 TXNL1O43396 289 aa5.49□□□□□ -1.53
PSEN1-216ENST00000556066 RHBDL1O75783 438 aa5.49□□□□□ -1.53
PSEN1-216ENST00000556066 SCGB1D1O95968 90 aa5.49□□□□□ -1.53
PSEN1-216ENST00000556066 CST4P01036 141 aa5.49□□□□□ -1.53
PSEN1-216ENST00000556066 FBP1P09467 338 aa5.49□□□□□ -1.53
PSEN1-216ENST00000556066 ANXA8P13928 327 aa5.49□□□□□ -1.53
PSEN1-216ENST00000556066 FAHP16930 419 aa5.49□□□□□ -1.53
PSEN1-216ENST00000556066 ALOX5APP20292 161 aa5.49□□□□□ -1.53
PSEN1-216ENST00000556066 MAPK3P27361 379 aaPredicted RBP5.49□□□□□ -1.53
PSEN1-216ENST00000556066 SAA4P35542 130 aa5.49□□□□□ -1.53
PSEN1-216ENST00000556066 MAP2K4P45985 399 aa5.49□□□□□ -1.53
PSEN1-216ENST00000556066 IER3P46695 156 aa5.49□□□□□ -1.53
PSEN1-216ENST00000556066 TGM4P49221 684 aa5.49□□□□□ -1.53
PSEN1-216ENST00000556066 CAPZA1P52907 286 aa5.49□□□□□ -1.53
PSEN1-216ENST00000556066 GNG3P63215 75 aa5.49□□□□□ -1.53
PSEN1-216ENST00000556066 DGUOKQ16854 277 aa5.49□□□□□ -1.53
PSEN1-216ENST00000556066 MIDNQ504T8 468 aa5.49□□□□□ -1.53
PSEN1-216ENST00000556066 SLC35D3Q5M8T2 416 aa5.49□□□□□ -1.53
PSEN1-216ENST00000556066 ATPAF1Q5TC12 328 aaPredicted RBP5.49□□□□□ -1.53
PSEN1-216ENST00000556066 PLCXD3Q63HM9 321 aa5.49□□□□□ -1.53
PSEN1-216ENST00000556066 KCTD18Q6PI47 426 aaPredicted RBP5.49□□□□□ -1.53
PSEN1-216ENST00000556066 GDPGP1Q6ZNW5 385 aa5.49□□□□□ -1.53
PSEN1-216ENST00000556066 MOB3CQ70IA8 216 aa5.49□□□□□ -1.53
PSEN1-216ENST00000556066 LDLRAD3Q86YD5 345 aa5.49□□□□□ -1.53
PSEN1-216ENST00000556066 PNKDQ8N490 385 aa5.49□□□□□ -1.53
PSEN1-216ENST00000556066 Q8N7P7 452 aa5.49□□□□□ -1.53
PSEN1-216ENST00000556066 LY6G5BQ8NDX9 201 aa5.49□□□□□ -1.53
PSEN1-216ENST00000556066 SETD9Q8NE22 299 aa5.49□□□□□ -1.53
PSEN1-216ENST00000556066 TMEM185AQ8NFB2 350 aa5.49□□□□□ -1.53
PSEN1-216ENST00000556066 OR10Z1Q8NGY1 313 aa5.49□□□□□ -1.53
PSEN1-216ENST00000556066 OR51E1Q8TCB6 317 aa5.49□□□□□ -1.53
PSEN1-216ENST00000556066 APH1BQ8WW43 257 aa5.49□□□□□ -1.53
PSEN1-216ENST00000556066 HPSE2Q8WWQ2 592 aa5.49□□□□□ -1.53
PSEN1-216ENST00000556066 ISOC1Q96CN7 298 aa5.49□□□□□ -1.53
PSEN1-216ENST00000556066 GAFA1Q96PS6 74 aa5.49□□□□□ -1.53
PSEN1-216ENST00000556066 TEAD3Q99594 435 aa5.49□□□□□ -1.53
PSEN1-216ENST00000556066 APOL4Q9BPW4 351 aa5.49□□□□□ -1.53
PSEN1-216ENST00000556066 DCTN5Q9BTE1 182 aa5.49□□□□□ -1.53
PSEN1-216ENST00000556066 GABARAPL3Q9BY60 117 aa5.49□□□□□ -1.53
PSEN1-216ENST00000556066 MROQ9BYG7 248 aa5.49□□□□□ -1.53
PSEN1-216ENST00000556066 CCDC90BQ9GZT6 254 aa5.49□□□□□ -1.53
PSEN1-216ENST00000556066 FGF23Q9GZV9 251 aaPredicted RBP5.49□□□□□ -1.53
PSEN1-216ENST00000556066 DNTTIP1Q9H147 329 aa5.49□□□□□ -1.53
PSEN1-216ENST00000556066 VCX3AQ9NNX9 186 aa5.49□□□□□ -1.53
PSEN1-216ENST00000556066 ABCB9Q9NP78 766 aa5.49□□□□□ -1.53
PSEN1-216ENST00000556066 NLKQ9UBE8 527 aa5.49□□□□□ -1.53
PSEN1-216ENST00000556066 IKZF2Q9UKS7 526 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms