RNA–Protein interactions for RNA: ENST00000555541.1

SNX6-204, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 339 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-204ENST00000555541 P01737 135 aa0.52□□□□□ -2.33
SNX6-204ENST00000555541 CATP04040 527 aaKnown RBP0.52□□□□□ -2.33
SNX6-204ENST00000555541 ERCC1P07992 297 aaPredicted RBP0.52□□□□□ -2.33
SNX6-204ENST00000555541 PAX6P26367 422 aa0.52□□□□□ -2.33
SNX6-204ENST00000555541 PSMB9P28065 219 aa0.52□□□□□ -2.33
SNX6-204ENST00000555541 MAGEA3P43357 314 aa0.52□□□□□ -2.33
SNX6-204ENST00000555541 EMP2P54851 167 aa0.52□□□□□ -2.33
SNX6-204ENST00000555541 TAS2R39P59534 338 aa0.52□□□□□ -2.33
SNX6-204ENST00000555541 RPS15P62841 145 aaKnown RBP0.52□□□□□ -2.33
SNX6-204ENST00000555541 LAMTOR4Q0VGL1 99 aa0.52□□□□□ -2.33
SNX6-204ENST00000555541 MERTKQ12866 999 aa0.52□□□□□ -2.33
SNX6-204ENST00000555541 PMVKQ15126 192 aa0.52□□□□□ -2.33
SNX6-204ENST00000555541 GABRA6Q16445 453 aa0.52□□□□□ -2.33
SNX6-204ENST00000555541 TMEM220Q6QAJ8 160 aa0.52□□□□□ -2.33
SNX6-204ENST00000555541 C2orf73Q8N5S3 287 aaPredicted RBP0.52□□□□□ -2.33
SNX6-204ENST00000555541 OR5C1Q8NGR4 320 aa0.52□□□□□ -2.33
SNX6-204ENST00000555541 OR10Z1Q8NGY1 313 aa0.52□□□□□ -2.33
SNX6-204ENST00000555541 C2orf15Q8WU43 125 aaKnown RBP0.52□□□□□ -2.33
SNX6-204ENST00000555541 PANX1Q96RD7 426 aa0.52□□□□□ -2.33
SNX6-204ENST00000555541 AICDAQ9GZX7 198 aa0.52□□□□□ -2.33
SNX6-204ENST00000555541 CD209Q9NNX6 404 aa0.52□□□□□ -2.33
SNX6-204ENST00000555541 CCNB1IP1Q9NPC3 277 aa0.52□□□□□ -2.33
SNX6-204ENST00000555541 PXMP2Q9NR77 195 aa0.52□□□□□ -2.33
SNX6-204ENST00000555541 RBM22Q9NW64 420 aaKnown RBP eCLIP0.52□□□□□ -2.33
SNX6-204ENST00000555541 PRO0628Q9UI54 55 aa0.52□□□□□ -2.33
SNX6-204ENST00000555541 CCDC88CQ9P219 2028 aa0.52□□□□□ -2.33
SNX6-204ENST00000555541 A0A1W2PQL4 384 aaPredicted RBP0.51□□□□□ -2.33
SNX6-204ENST00000555541 A6NED7 52 aa0.51□□□□□ -2.33
SNX6-204ENST00000555541 SIGLEC16A6NMB1 481 aa0.51□□□□□ -2.33
SNX6-204ENST00000555541 ODF3BA8MYP8 253 aa0.51□□□□□ -2.33
SNX6-204ENST00000555541 F5H5T6 163 aa0.51□□□□□ -2.33
SNX6-204ENST00000555541 MPDU1O75352 247 aa0.51□□□□□ -2.33
SNX6-204ENST00000555541 TMEM241Q24JQ0 296 aa0.51□□□□□ -2.33
SNX6-204ENST00000555541 OR4K2Q8NGD2 314 aa0.51□□□□□ -2.33
SNX6-204ENST00000555541 MFSD8Q8NHS3 518 aa0.51□□□□□ -2.33
SNX6-204ENST00000555541 JSRP1Q96MG2 331 aaPredicted RBP0.51□□□□□ -2.33
SNX6-204ENST00000555541 HSPB9Q9BQS6 159 aa0.51□□□□□ -2.33
SNX6-204ENST00000555541 CRB1P82279 1406 aa0.5□□□□□ -2.33
SNX6-204ENST00000555541 TP53I11O14683 189 aa0.5□□□□□ -2.33
SNX6-204ENST00000555541 GZMBP10144 247 aa0.5□□□□□ -2.33
SNX6-204ENST00000555541 HTR2CP28335 458 aa0.5□□□□□ -2.33
SNX6-204ENST00000555541 IMPA1P29218 277 aa0.5□□□□□ -2.33
SNX6-204ENST00000555541 C5orf64Q2M2E5 130 aa0.5□□□□□ -2.33
SNX6-204ENST00000555541 ACSBG2Q5FVE4 666 aa0.5□□□□□ -2.33
SNX6-204ENST00000555541 CLLU1OSQ5K130 101 aa0.5□□□□□ -2.33
SNX6-204ENST00000555541 SLC25A25Q6KCM7 469 aa0.5□□□□□ -2.33
SNX6-204ENST00000555541 PQLC3Q8N755 202 aa0.5□□□□□ -2.33
SNX6-204ENST00000555541 C8orf31Q8N9H6 132 aa0.5□□□□□ -2.33
SNX6-204ENST00000555541 FAM81AQ8TBF8 368 aa0.5□□□□□ -2.33
SNX6-204ENST00000555541 ING5Q8WYH8 240 aa0.5□□□□□ -2.33
SNX6-204ENST00000555541 CHP1Q99653 195 aa0.5□□□□□ -2.33
SNX6-204ENST00000555541 ASB7Q9H672 318 aa0.5□□□□□ -2.33
SNX6-204ENST00000555541 GEMIN7Q9H840 131 aaKnown RBP0.5□□□□□ -2.33
SNX6-204ENST00000555541 C20orf96Q9NUD7 363 aaPredicted RBP0.5□□□□□ -2.33
SNX6-204ENST00000555541 MYEF2Q9P2K5 600 aaKnown RBP0.5□□□□□ -2.33
SNX6-204ENST00000555541 MUC5BQ9HC84 5762 aaPredicted RBP0.5□□□□□ -2.33
SNX6-204ENST00000555541 ZNF469Q96JG9 3925 aaPredicted RBP0.49□□□□□ -2.33
SNX6-204ENST00000555541 SLIT2O94813 1529 aa0.49□□□□□ -2.33
SNX6-204ENST00000555541 TRBV24-1A0A075B6N3 115 aa0.49□□□□□ -2.33
SNX6-204ENST00000555541 SLC37A4O43826 429 aa0.49□□□□□ -2.33
SNX6-204ENST00000555541 ARL2P36404 184 aa0.49□□□□□ -2.33
SNX6-204ENST00000555541 HTR2BP41595 481 aa0.49□□□□□ -2.33
SNX6-204ENST00000555541 SSX1Q16384 188 aa0.49□□□□□ -2.33
SNX6-204ENST00000555541 CLEC19AQ6UXS0 136 aa0.49□□□□□ -2.33
SNX6-204ENST00000555541 Q6ZRN7 208 aaPredicted RBP0.49□□□□□ -2.33
SNX6-204ENST00000555541 SSX9Q7RTT3 188 aa0.49□□□□□ -2.33
SNX6-204ENST00000555541 SCXQ7RTU7 201 aa0.49□□□□□ -2.33
SNX6-204ENST00000555541 CYP4Z2PQ8N1L4 340 aa0.49□□□□□ -2.33
SNX6-204ENST00000555541 OR4C16Q8NGL9 310 aa0.49□□□□□ -2.33
SNX6-204ENST00000555541 UBA3Q8TBC4 463 aa0.49□□□□□ -2.33
SNX6-204ENST00000555541 DCANP1Q8TF63 244 aa0.49□□□□□ -2.33
SNX6-204ENST00000555541 TSGA10Q9BZW7 698 aa0.49□□□□□ -2.33
SNX6-204ENST00000555541 CYB5R1Q9UHQ9 305 aa0.49□□□□□ -2.33
SNX6-204ENST00000555541 PSORS1C2Q9UIG4 136 aa0.49□□□□□ -2.33
SNX6-204ENST00000555541 INSIG2Q9Y5U4 225 aa0.49□□□□□ -2.33
SNX6-204ENST00000555541 ZNF706Q9Y5V0 76 aaPredicted RBP0.49□□□□□ -2.33
SNX6-204ENST00000555541 AHNAKQ09666 5890 aaKnown RBP0.48□□□□□ -2.33
SNX6-204ENST00000555541 NCKAP5O14513 1909 aa0.48□□□□□ -2.33
SNX6-204ENST00000555541 MDN1Q9NU22 5596 aa0.48□□□□□ -2.33
SNX6-204ENST00000555541 INSRP06213 1382 aa0.48□□□□□ -2.33
SNX6-204ENST00000555541 A0A1W2PRD5 423 aa0.48□□□□□ -2.33
SNX6-204ENST00000555541 ETHE1O95571 254 aa0.48□□□□□ -2.33
SNX6-204ENST00000555541 PDYNP01213 254 aa0.48□□□□□ -2.33
SNX6-204ENST00000555541 RHOCP08134 193 aa0.48□□□□□ -2.33
SNX6-204ENST00000555541 GTF2F2P13984 249 aa0.48□□□□□ -2.33
SNX6-204ENST00000555541 TTMPQ5BVD1 217 aa0.48□□□□□ -2.33
SNX6-204ENST00000555541 TTC32Q5I0X7 151 aa0.48□□□□□ -2.33
SNX6-204ENST00000555541 OTUD6AQ7L8S5 288 aa0.48□□□□□ -2.33
SNX6-204ENST00000555541 DPPA2Q7Z7J5 298 aa0.48□□□□□ -2.33
SNX6-204ENST00000555541 MUC15Q8N387 334 aa0.48□□□□□ -2.33
SNX6-204ENST00000555541 KIF2BQ8N4N8 673 aa0.48□□□□□ -2.33
SNX6-204ENST00000555541 TMEM234Q8WY98 164 aa0.48□□□□□ -2.33
SNX6-204ENST00000555541 MCUR1Q96AQ8 359 aa0.48□□□□□ -2.33
SNX6-204ENST00000555541 SMIM8Q96KF7 97 aa0.48□□□□□ -2.33
SNX6-204ENST00000555541 C9orf72Q96LT7 481 aa0.48□□□□□ -2.33
SNX6-204ENST00000555541 OPALINQ96PE5 141 aa0.48□□□□□ -2.33
SNX6-204ENST00000555541 PLIN2Q99541 437 aa0.48□□□□□ -2.33
SNX6-204ENST00000555541 ZNF251Q9BRH9 671 aa0.48□□□□□ -2.33
SNX6-204ENST00000555541 DEFB129Q9H1M3 183 aa0.48□□□□□ -2.33
SNX6-204ENST00000555541 OR2D2Q9H210 308 aa0.48□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms